| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 683667 | 71 (1.200) | 5 (0.090) | 3/96 | NT | 6.9% | coding (48/459 nt) | mgsA | methylglyoxal synthase |
| ? | Exported | = 683688 | 69 (1.240) | coding (27/459 nt) | mgsA | methylglyoxal synthase | |||||
AGTAACGGTTGATGCCGTTCCACCCAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/683605‑683667‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accTGCGCGGAAACATATTGCGCTGGTGGCACACGATCACTGCAAACAAATGCTGATGAGCTGGGTGGAACG < Exported/683688‑683620 AGTAACGGTTGATGCCGTTCCACCCAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCA > 1:1658738/1‑61AGTAACGGTTGATGCCGTTCCACCCAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCA > 1:2124870/1‑61AGTAACGGTTGATGCCGTTCCACCCAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCA > 1:678917/1‑61 GCCGTTCCACCCAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCTGCGCGGAAACATATTGCGCT > 1:1599285/1‑71 CCGTTCCACCCAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCTGCGCGGAAACATATTGCGCT < 1:1417387/70‑1 CCGTTCCACCCAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCTGCGCGGAAACATATTGCGCT < 1:422022/70‑1 CCGTTCCACCCAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCTGCGCGGAAACATATTGCGCT < 1:4978/70‑1 CTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCTGCGCGGAAACATATTGCGCTGGTGGC > 1:449149/1‑63 ACCTGCGCGGAAACATATTGCGCTGGTGGCACACGATCACTGCAAACAAATGCTGATGAGCTGGGTGGAA < 1:1193917/70‑1 ACCTGCGCGGAAACATATTGCGCTGGTGGCACACGATCACTGCAAACAAATGCTGATGAGCTGGGTGGAA < 1:721180/70‑1 CCTGCGCGGAAACATATTGCGCTGGTGGCACACGATCACTGCAAACAAATGCTGATGAGCTGGGTGGAACG < 1:2385028/71‑1 CCTGCGCGGAAACATATTGCGCTGGTGGCACACGATCACTGCAAACAAATGCTGATGAGCTGGGTGGAAC < 1:3087349/70‑1 AGTAACGGTTGATGCCGTTCCACCCAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/683605‑683667‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accTGCGCGGAAACATATTGCGCTGGTGGCACACGATCACTGCAAACAAATGCTGATGAGCTGGGTGGAACG < Exported/683688‑683620 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |