| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 683667 | 71 (1.200) | 5 (0.090) | 3/96 | NT | 6.9% | coding (48/459 nt) | mgsA | methylglyoxal synthase |
| ? | Exported | = 683688 | 69 (1.240) | coding (27/459 nt) | mgsA | methylglyoxal synthase | |||||
Only 100 of 104 total aligned reads displayed.
CGTTCCACCCAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCAC > Exported/683620‑683758 | cGTTCCACCCAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAgg < 1:2385028‑M2/71‑3 (MQ=255) gTTCCACCCAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAgg < 1:3087349‑M2/70‑3 (MQ=255) ttCCACCCAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAggt < 1:1193917‑M2/70‑4 (MQ=255) ttCCACCCAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAggt < 1:721180‑M2/70‑4 (MQ=255) ttCCACCCAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTa < 1:2152444/71‑1 (MQ=255) ttCCACCCAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTa < 1:686948/71‑1 (MQ=255) ccACCCAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTaa < 1:1949774/70‑1 (MQ=255) cccAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGt > 1:1406736/1‑70 (MQ=255) ccAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGc < 1:1719363/71‑1 (MQ=255) ccAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGc < 1:3224602/71‑1 (MQ=255) ccAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGc > 1:2799795/1‑71 (MQ=255) ccAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGc > 1:2532042/1‑71 (MQ=255) ccAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGc < 1:677095/71‑1 (MQ=255) ccAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGc > 1:1400507/1‑71 (MQ=255) cAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGc < 1:3560787/70‑1 (MQ=255) aGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGc > 1:1258147/1‑69 (MQ=255) gCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAg > 1:7453/1‑71 (MQ=255) gCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAg > 1:704247/1‑71 (MQ=255) cTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAgt < 1:2670267/71‑1 (MQ=255) tcatcaGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAg < 1:1368066/63‑1 (MQ=255) tcatcaGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAg < 1:2958096/63‑1 (MQ=255) tcatcaGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAg < 1:574405/63‑1 (MQ=255) tcatcaGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAg < 1:992639/63‑1 (MQ=255) atcaGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAgtcgt < 1:3264302/71‑1 (MQ=255) tcaGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAgtcgtc < 1:1434313/71‑1 (MQ=255) tcaGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAgtcgtc < 1:1887565/71‑1 (MQ=255) tcaGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAgtcgt < 1:2889271/70‑1 (MQ=255) caGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAgtcgt > 1:2380342/1‑69 (MQ=255) aGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAg < 1:49624/71‑1 (MQ=255) aGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAg > 1:1032707/1‑71 (MQ=255) cATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGtt < 1:2351675/71‑1 (MQ=255) tttgtttgCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAg > 1:1791913/1‑67 (MQ=255) tttgtttgCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGt > 1:1697274/1‑68 (MQ=255) tgtttgCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAgtcgt > 1:3472186/1‑62 (MQ=255) tgtttgCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCa > 1:3168183/1‑70 (MQ=255) tgtttgCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCa > 1:3172442/1‑70 (MQ=255) tgtttgCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCa > 1:427796/1‑70 (MQ=255) tttgCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATaa < 1:140410/71‑1 (MQ=255) cAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGt < 1:3465846/70‑1 (MQ=255) aGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAgtcgtc < 1:1779043/56‑1 (MQ=255) aGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAgtcgtc < 1:1635661/56‑1 (MQ=255) aGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAgtcgtc < 1:2487870/56‑1 (MQ=255) gTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACa < 1:1967774/71‑1 (MQ=255) tGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACAt < 1:1085696/71‑1 (MQ=255) aTCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGa > 1:1159753/1‑46 (MQ=255) aTCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGa > 1:1902007/1‑46 (MQ=255) aTCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGa > 1:2636838/1‑46 (MQ=255) aTCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCAt > 1:2321087/1‑60 (MQ=255) aTCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAAtag > 1:3207681/1‑63 (MQ=255) aTCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATcc > 1:890429/1‑71 (MQ=255) cGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATc < 1:2837066/68‑1 (MQ=255) tgCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGtt < 1:1201664/71‑1 (MQ=255) gCCACCAGCGCAATATGTTTCCGCGCAggtggcacacgatcactgcaaacaaatgctgatgag > 1:449149‑M2/1‑27 (MQ=255) accaGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACt < 1:3534725/71‑1 (MQ=255) accaGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACt < 1:2983658/71‑1 (MQ=255) accaGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACt < 1:3248741/71‑1 (MQ=255) ccaGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTcc > 1:2596159/1‑47 (MQ=255) ccaGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACtt < 1:2079327/71‑1 (MQ=255) ccaGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACtt < 1:216184/71‑1 (MQ=255) caGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAg > 1:1870614/1‑35 (MQ=255) caGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACttt > 1:1632164/1‑71 (MQ=255) caGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACttt > 1:1264187/1‑71 (MQ=255) aGCGCAATATGTTTCCGCGCAggtggcacacgatcactgcaaacaaatgctgatgagctgggtggaacggc > 1:1599285‑M2/1‑21 (MQ=255) aGCGCAATATGTTTCCGCGCAggtggcacacgatcactgcaaacaaatgctgatgagctgggtggaacgg < 1:1417387‑M2/70‑50 (MQ=255) aGCGCAATATGTTTCCGCGCAggtggcacacgatcactgcaaacaaatgctgatgagctgggtggaacgg < 1:4978‑M2/70‑50 (MQ=255) aGCGCAATATGTTTCCGCGCAggtggcacacgatcactgcaaacaaatgctgatgagctgggtggaacgg < 1:422022‑M2/70‑50 (MQ=255) aGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATcc > 1:133433/1‑58 (MQ=255) aGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTc < 1:379536/71‑1 (MQ=255) cgcAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCt < 1:2384510/71‑1 (MQ=255) gcAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTa < 1:3447379/71‑1 (MQ=255) cAATATGTTTCCGCGCAGGTAAAGTGCTAGTCGTCAGTTCCa < 1:2512256/42‑1 (MQ=255) cAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCa < 1:47766/42‑1 (MQ=255) aaTATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGtt < 1:1484606/59‑1 (MQ=255) atGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGAt > 1:1913339/1‑71 (MQ=255) tGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGAt > 1:1586566/1‑70 (MQ=255) tGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGAt > 1:3238761/1‑70 (MQ=255) gTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTAc < 1:2026586/44‑1 (MQ=255) gTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTAc < 1:1051204/44‑1 (MQ=255) gTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTAc < 1:544290/44‑1 (MQ=255) gTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTAc < 1:1770314/44‑1 (MQ=255) gTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTAc < 1:3163797/44‑1 (MQ=255) gTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTAc < 1:2631854/44‑1 (MQ=255) tttCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTAc < 1:1351877/71‑1 (MQ=255) cgcgCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGt < 1:3580222/70‑1 (MQ=255) gcgcAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTg > 1:2591025/1‑68 (MQ=255) gcgcAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGt < 1:561681/69‑1 (MQ=255) cgcAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACa < 1:3260069/59‑1 (MQ=255) cgcAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAg < 1:1648600/71‑1 (MQ=255) gcAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTa > 1:3027686/1‑47 (MQ=255) gcAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTa > 1:1445379/1‑47 (MQ=255) gcAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTa > 1:2358454/1‑47 (MQ=255) cAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAg > 1:1505508/1‑58 (MQ=255) cAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGa > 1:2307942/1‑59 (MQ=255) cAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGa > 1:2312499/1‑59 (MQ=255) cAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGa > 1:1379210/1‑59 (MQ=255) cAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGa > 1:2493639/1‑59 (MQ=255) cAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCa < 1:2941112/71‑1 (MQ=255) aGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCAc < 1:479397/71‑1 (MQ=255) aGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCAc < 1:3478649/71‑1 (MQ=255) aGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCAc > 1:3349840/1‑71 (MQ=255) | CGTTCCACCCAGCTCATCAGCATTTGTTTGCAGTGATCGTGTGCCACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCAC > Exported/683620‑683758 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |