| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 688504 = | 58 (0.980) | 4 (0.080) | 3/90 | NT | 7.3% | intergenic (‑93/‑334) | serT/hyaA | tRNA‑Ser/hydrogenase 1, small subunit |
| ? | Exported | 688531 = | 50 (0.960) | intergenic (‑120/‑307) | serT/hyaA | tRNA‑Ser/hydrogenase 1, small subunit | |||||
ATGTTTAGCCGGTTGCTAAACGAGTAAAAGAGAAGGAATTCATGGTGATGAAATGATCAATCTGCTGTTATTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/688578‑688504‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atttcaTCACCATGAATTCCTTCTCTTTTACTCGTTTAGCAACCGGCTAAACATCCCCACCGCCCGGCCAAAAGA > Exported/688531‑688599 ATGTTTAGCCGGTTGCTAAACGAGTAAAAGAGAAGGAATTCATGGTGATGAAATGATCAATCTGCTGTTAT < 1:2399893/71‑1 AGAAGGAATTCATGGTGATGAAATGATCAATCTGCTGTTATTTCA > 1:1393321/1‑45 AGAAGGAATTCATGGTGATGAAATGATCAATCTGCTGTTATTTCA > 1:260134/1‑45 GATGAAATGATCAATCTGCTGTTATTTCATCACCATGAATTCCTTCTCTTTTACTCGTTTAGCAACCGGC > 1:511719/1‑70 GAAATGATCAATCTGCTGTTATTTCATCACCATGAATTCCTTCTCTTTTACTCGTTTAGCAAC < 1:3068899/63‑1 GATCAATCTGCTGTTATTTCGTCACCATGAATTCCTTCT > 1:3675763/1‑39 GATCAATCTGCTGTTATTTCATCACCATGAATTCCTTCT > 1:1581566/1‑39 ATTTCATCACCATGAATTCCTTCTCTTTTACTCGTTTAGCAACCGGCTAAACATCCCCACCGCCCGGCCAA < 1:2036876/71‑1 ATTTCATCAACATGAATTCCTTCTCTTTTACTCGTTTAGCAACCGGCTAAACATCCCCACCGCCCGGCCAA < 1:587106/71‑1 TTTCATCACCATGAATTCCTTCTCTTTTACTCGTTTAGCAACCGGCTA < 1:2585873/48‑1 TCATCACCATGAATTCCTTCTCTTTTACTCGTTTAGCAACCGGCTAA > 1:2842515/1‑47 ATCACCATGAATTCCTTCTCTTTTACTCGTTTAGCAACCGGCTAAACATCCCCACCGCCCGGCCAAAAGA > 1:1153258/1‑70 ATCACCATGAATTCCTTCTCTTTTACTCGTTTAGCAACCGGCTAAACATCCCCACCGCCCGGCCAAAAGA > 1:2150891/1‑70 ATGTTTAGCCGGTTGCTAAACGAGTAAAAGAGAAGGAATTCATGGTGATGAAATGATCAATCTGCTGTTATTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/688578‑688504‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atttcaTCACCATGAATTCCTTCTCTTTTACTCGTTTAGCAACCGGCTAAACATCCCCACCGCCCGGCCAAAAGA > Exported/688531‑688599 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |