| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 688504 = | 58 (0.980) | 4 (0.080) | 3/90 | NT | 7.3% | intergenic (‑93/‑334) | serT/hyaA | tRNA‑Ser/hydrogenase 1, small subunit |
| ? | Exported | 688531 = | 50 (0.960) | intergenic (‑120/‑307) | serT/hyaA | tRNA‑Ser/hydrogenase 1, small subunit | |||||
CCCGATGCGGCGTGTAAACCCCTAATTTGTTTGTTTGCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTTCTCTTTTACTCGTTTAGCAACCGGC > Exported/688435‑688571 | tcttttggccgggcggtggggatgtttagccggttgctaaacgagtaaaagagaaggaattcatggtgat > 1:2150891‑M1/70‑70 (MQ=255)tcttttggccgggcggtggggatgtttagccggttgctaaacgagtaaaagagaaggaattcatggtgat > 1:1153258‑M1/70‑70 (MQ=255)cccGATGCGGCGTGTAAACCCCTAATTTGTTTGTTTGCCTGAAAAACAGCCAAAAGTGCATTGATAGCGt > 1:1710524/1‑70 (MQ=255)cccGATGCGGCGTGTAAACCCCTAATTTGTTTGTTTGCCTGAAAAACAGCCAAAAGTGCATTGATAGCGt > 1:319215/1‑70 (MQ=255) ccGATGCGGCGTGTAAACCCCTAATTTGTTTGTTTGCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTg > 1:1680427/1‑70 (MQ=255) ttggccgggcggtggggatgtttagccggttgctaaacgagtaaaagagaaggaattcatgttgaTGAAAt < 1:587106‑M1/6‑1 (MQ=255) ttggccgggcggtggggatgtttagccggttgctaaacgagtaaaagagaaggaattcatggtgaTGAAAt < 1:2036876‑M1/6‑1 (MQ=255) aTGCGGCGTGTAAACCCCTAATTTGTTTGTTTGCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAAt < 1:2258117/71‑1 (MQ=255) gtAAACCCCTAATTTGTTTGTTTGCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAAcag > 1:1056691/1‑67 (MQ=255) gtAAACCCCTAATTTGTTTGTTTGCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAAcag > 1:1061135/1‑67 (MQ=255) aaaCCCCTAATTTGTTTGTTTGCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTg > 1:3663000/1‑56 (MQ=255) aaCCCCTAATTTGTTTGTTTGCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTg < 1:1975932/71‑1 (MQ=255) cccTAATTTGTTTGTTTGCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTg > 1:578182/1‑52 (MQ=255) cccTAATTTGTTTGTTTGCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTg > 1:2405594/1‑52 (MQ=255) cccTAATTTGTTTGTTTGCCTGAAAAACAGCCAAAAGTGCATTGATAGAGTg > 1:218817/1‑52 (MQ=255) ccTAATTTGTTTGTTTGCCTGAAAAACAGCCAAAAGTGCATTGATAGCGt > 1:180965/1‑50 (MQ=255) ccTAATTTGTTTGTTTGCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCa < 1:526146/71‑1 (MQ=255) cTAATTTGTTTGTTTGCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATT‑ATCAtt < 1:402283/71‑1 (MQ=255) aTTTGTTTGTTTGCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTg > 1:1404305/1‑63 (MQ=255) aTTTGTTTGTTTGCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTg > 1:3668127/1‑63 (MQ=255) aTTTGTTTGTTTGCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCAtt < 1:1365343/69‑1 (MQ=255) aTTTGTTTGTTTGCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTtc < 1:3409963/71‑1 (MQ=255) ttagccggttgctaaacgagtaaaagagaaggaattcatggtgatga > 1:2842515‑M1/45‑47 (MQ=255) tagccggttgctaaacgagtaaaagagaaggaattcatggtgaTGaaa < 1:2585873‑M1/5‑1 (MQ=255) gccggttgctaaacgagtaaaagagaaggaattcatggtgaTGAAATAACAGCAGATTGATCATTtcatc > 1:511719‑M1/42‑70 (MQ=255) ttgtttgCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAAt < 1:482847/45‑1 (MQ=255) tgtttgCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCAt < 1:161281/61‑1 (MQ=255) gtttgCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATaa > 1:3721830/1‑45 (MQ=255) gttgctaaacgagtaaaagagaaggaattcatggtgaTGAAATAACAGCAGATTGATCATTtc < 1:3068899‑M1/26‑1 (MQ=255) tttgCCTGAAAAACAGCCAAAAGTGCATTTATAGCGTGAAATAACAGCAGATTGATCATTtcat < 1:2044319/64‑1 (MQ=255) tttgCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTtcat < 1:1303184/64‑1 (MQ=255) tttgCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTtcat < 1:2292537/64‑1 (MQ=255) ttgCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATg > 1:2371559/1‑70 (MQ=255) tgCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTtcatca > 1:767976/1‑64 (MQ=255) tgCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTtcatca > 1:2010216/1‑64 (MQ=255) tgCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTtcatca > 1:126579/1‑64 (MQ=255) gCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAAt > 1:3006716/1‑71 (MQ=255) tGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTtcatca < 1:2981085/60‑1 (MQ=255) tGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTtcatca < 1:3123014/60‑1 (MQ=255) tGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTcc > 1:829091/1‑71 (MQ=255) tGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTcc > 1:270211/1‑71 (MQ=255) tGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTcc > 1:1728272/1‑71 (MQ=255) tGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTcc > 1:1213166/1‑71 (MQ=255) gAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCt > 1:1858686/1‑71 (MQ=255) aaaaaCAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTtcatca > 1:1389196/1‑58 (MQ=255) aaaaaCAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTtc > 1:2262781/1‑54 (MQ=255) aaaaaCAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCtt > 1:2364703/1‑71 (MQ=255) aaaaaCAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCtt > 1:767733/1‑71 (MQ=255) aaaaaCAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCt > 1:1445803/1‑70 (MQ=255) aaaaCAGCCAAAAGTGCATTGATAGCGTGAAATAAca > 1:57766/1‑37 (MQ=255) aCAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTTctct < 1:2047765/71‑1 (MQ=255) aCAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTTctct < 1:2276218/71‑1 (MQ=255) aGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTtctc < 1:1167562/68‑1 (MQ=255) aGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTTCTCttt < 1:3635707/71‑1 (MQ=255) tctaaaaGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTTCTCttt < 1:3380558/67‑1 (MQ=255) ccAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTtcatc < 1:1594357/49‑1 (MQ=255) ccAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCt < 1:2515616/62‑1 (MQ=255) ccAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCt < 1:714065/62‑1 (MQ=255) cAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTTCTCTTTTa > 1:1405855/1‑70 (MQ=255) agaaggaattcatggtgaTGAAATAACAGCAGATTGATc > 1:1581566‑M1/19‑39 (MQ=255) agaaggaattcatggtgaCGAAATAACAGCAGATTGATc > 1:3675763‑M1/19‑39 (MQ=255) aaaaGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCAc > 1:2363984/1‑49 (MQ=255) aaaaGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCAc > 1:613850/1‑49 (MQ=255) aaaGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTTCTCttt < 1:2884190/66‑1 (MQ=255) aaaGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTTCTCTTTTACTc > 1:727955/1‑71 (MQ=255) aGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTTCTCTTTTACTCGt > 1:664410/1‑71 (MQ=255) aGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTTCTCTTTTACTCGt < 1:480936/71‑1 (MQ=255) aGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTTCTCTTTTACTCGt > 1:1033591/1‑71 (MQ=255) aGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTTCTCTTTTACTCGt < 1:2863532/71‑1 (MQ=255) tGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTTCTCTTTTACTCGttt < 1:1127648/71‑1 (MQ=255) tGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTTCTCTTTTACTCGttt < 1:499482/71‑1 (MQ=255) tGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTTCTCTTTTACTCGttt < 1:1131886/71‑1 (MQ=255) aTTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTTCTCTTTTACTCGTTTAGc < 1:2241523/71‑1 (MQ=255) ttGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCt < 1:2623856/51‑1 (MQ=255) gATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTTCTCTTTTa > 1:1111257/1‑58 (MQ=255) gATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTTCTCTTTTa > 1:1679789/1‑58 (MQ=255) aGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTTCTCTTTTACTCGTTTa > 1:2357660/1‑63 (MQ=255) gCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTTCTCTTTTACTCGTTTAGCAACCGGc > 1:2435330/1‑71 (MQ=255) gCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTTCTCTTTTACTCGTTTAGCAACCGGc > 1:3576191/1‑71 (MQ=255) gCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTTCTCTTTTACTCGTTTAGCAACCGGc > 1:3070818/1‑71 (MQ=255) TGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTtct > 1:1393321‑M1/1‑45 (MQ=255) TGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTtct > 1:260134‑M1/1‑45 (MQ=255) | CCCGATGCGGCGTGTAAACCCCTAATTTGTTTGTTTGCCTGAAAAACAGCCAAAAGTGCATTGATAGCGTGAAATAACAGCAGATTGATCATTTCATCACCATGAATTCCTTCTCTTTTACTCGTTTAGCAACCGGC > Exported/688435‑688571 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |