New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Exported 1037327 =87 (1.470)10 (0.190) 5/92 NT 11.9% coding (495/1059 nt) rsxD predicted inner membrane oxidoreductase
?Exported 1037353 = 70 (1.320)coding (521/1059 nt) rsxD predicted inner membrane oxidoreductase

CAGCGGTGTCGCCTGACTAATGCCATCAATACCTAAGCGTAGTGTGTTCATATCACCACCACTGGCGGTATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Exported/1037399‑1037327
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatgaACACACTACGCTTAGGTATTGATGGCATTAGTCAGGCGACACCGCTGGATACATTTAAAACCTCTGTC  >  Exported/1037353‑1037420
                                                                                                                                             
CAGCGGTGTCGCCTGACTAATGCCATCAATACCTAAGCGTAGTGTGTTCATATCACCACCACTGGCGGTAT                                                                        <  1:1727004/71‑1
 AGCGGTGTCGCCTGACTAATGCCATCAATACCTAAGCGTAGTGTGTTCATATCACCGCCAGTGGTGGTg                                                                         <  1:746709/69‑2
 AGCGGTGTCGCCTGACTAATGCCATCAATACCTAAGCGTAGTGTGTTCATATCACCACCACTGGCGGTAT                                                                        >  1:3124461/1‑70
 AGCGGTGTCGCCTGACTAATGCCATCAATACCTAAGCGTAGTGGGTTCATATCACCGCCAGTGGTGGTg                                                                         <  1:3003235/69‑2
  GCGGTGTCGCCTGACTAATGCCATCAATACCTAAGCGTAGTGTGTTCATATCACCACCACTGGCGGTATGA                                                                      >  1:1395836/1‑71
  GCGGTGTCGCCTGACTAATGCCATCAATACCTAAGCGTAGTGTGTTCATATCACCACCACTGGCGGTATGA                                                                      >  1:2929380/1‑71
                                  AAGCGTAGTGTGTTCATATCACCACCACTGGCGGTATGA                                                                      <  1:3432937/39‑1
                                             GTTCATATCACCACCACTGGCGGTATGAACACACTACTCTTAGGTATTGATTGCATTAGTCAG                                   <  1:3656547/63‑1
                                             GTTCATATCACCACCACTGGCGGTATGAACACACTACGCTTAGGTATTGATGGCATTAGTCAG                                   <  1:1107560/63‑1
                                               TCATATCACCACCACTGGCGGTATGAACACACTACGCTTAGGTATTGATGGCATTAGTCAGGC                                 >  1:1224718/1‑63
                                               TCATATCACCACCACTGGCGGTATGAACACACTACGCTTAGGTAT                                                   >  1:1221397/1‑45
                                                CATATCACCACCACTGGCGGTATGAACACACTACGCTTAGGTATTGATGGCATTAGTCAGGCGACAC                            <  1:285099/67‑1
                                                CATATCACCACCACTGGCGGTATGAACACACTACGCTTAGGTATTGATGGCATTAGTCAGGCGACAC                            <  1:1487678/67‑1
                                                CATATCACCACCACTGGCGGTATGAACACACTACGCTTAGGTATTGATGGCATTAGTCAGGCGACA                             >  1:276703/1‑66
                                                CATATCACCACCACTGGCGGTATGAACACACTACGCTTAGGTATTGATGGCATTAGTCAGGCGACA                             >  1:329806/1‑66
                                                 ATATCACCACCACTGGCGGTATGAACACACTACGCTTAGGTATTGATGGCATTAGTCAGGCGACAC                            <  1:1037074/66‑1
                                                  TATCACCACCACTGGCGGTATGAACACACTACGCTTAGGTATTGATGGCATTAGTCAGGCGACACCG                          >  1:1760820/1‑67
                                                                    TATGAACACACTACGCTTAGGTATTGATGGCATTAGTCAGGCGACACCGCTGGATACATTTAAAACCTCTG    >  1:403328/1‑71
                                                                      TGAACACACTACGCTTAGGTATTGATGGCATTAGTCAGGCGACACCGCTGGATACATTTAAAACCTCTGTC  <  1:2590526/71‑1
                                                                      TGAACACACTACGCTTAGGTATTGATGGCATTAGTCAGGCGACACCGCTGGATACATTTAAAACCTCTGTC  <  1:2590161/71‑1
                                                                                                                                             
CAGCGGTGTCGCCTGACTAATGCCATCAATACCTAAGCGTAGTGTGTTCATATCACCACCACTGGCGGTATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Exported/1037399‑1037327
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatgaACACACTACGCTTAGGTATTGATGGCATTAGTCAGGCGACACCGCTGGATACATTTAAAACCTCTGTC  >  Exported/1037353‑1037420

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.