| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 1401133 | 42 (0.710) | 9 (0.170) | 3/90 | NT | 20.7% | intergenic (+134/‑278) | yeiU/spr | undecaprenyl pyrophosphate phosphatase/predicted peptidase, outer membrane lipoprotein |
| ? | Exported | = 1401140 | 32 (0.610) | intergenic (+141/‑271) | yeiU/spr | undecaprenyl pyrophosphate phosphatase/predicted peptidase, outer membrane lipoprotein | |||||
GCACCGTGCTTTCATCTATCGAACGCAAAAATCATTCTCTAAGTAAATGAATGGATTGCATGCGTTTCACTCAATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1401058‑1401133‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaattAAAGTACAATTGAGTGAAACGCATGCAATCCATTCATTTACTTAGAGAATGATTTTTGCGTTCGATA < Exported/1401140‑1401074 GCACCGTGCTTTCATCTATCGAACGCAAAAATCATTCTCTAAGTAAATGAATGGATTGCATGCGTTTCACT > 1:1106648/1‑71GCACCGTGCTTTCATCTATCGAACGCAAAAATCATTCTCTAAGTAAATGAATGGATTGCATGCGTTTCACT > 1:3080371/1‑71GCACCGTGCTTTCATCTATCGAACGCAAAAATCATTATCTAAGTAAATGAATGGATTGCATGCGTTTCACT > 1:2965453/1‑71 GAACGCAAAAATCATTCTCTAAGTAAATGAATGGATTGCATGCGTTTCACTCAATTAAAGTACAATTGAG < 1:1771635/70‑1 ATGAATGGATTGCATGCGTTTCACTCAATTAAAGTACAATT < 1:556716/41‑1 GAATGGATTGCATGCGTTTCACTCAATTAAAGTACAATTGA > 1:28995/1‑41 GAATGGATTGCATGCGTTTCACTCAATTAAAGTACAATTGA > 1:551996/1‑41 GAATGGATTGCATGCGTTTCACTCAATTAAAGTACAATTGA > 1:3229771/1‑41 GAATGGATTGCATGCGTTTCACTCAATTAAAGTACAATTGA > 1:3073224/1‑41 GAATGGATTGCATGCGTTTCACTCAATTAAAGTACAATTGA > 1:1879289/1‑41 GAATGGATTGCATGCGTTTCACTCAATTAAAGTACAATTGA > 1:1697499/1‑41 GAATGGATTGCATGCGTTTCACTCAATTAAAGTACAATTGA > 1:1362306/1‑41 AATTAAAGTACAATTGAGTGAAACGCATGCAATCCATTCATTTACTTAGAGAATGATTTTTGCGTTCGATA < 1:1419426/71‑1 AATTAAAGTACAATTGAGTGAAACGCATGCAATCCATTCATTTACTTAGAGAATGATTTTTGCGTTCGATA < 1:99095/71‑1 AATTAAAGTACAATTGAGTGAAACGCATGCAATCCATTCATTTACTTAGA > 1:1537636/1‑50 AATTAAAGTACAATTGAGTGAAACGCATGCAATCCATTCATTTACTTAGA > 1:331074/1‑50 ATTAAAGTACAATTGAGTGAAACGCATGCAATCCATTCATTTACTTAGAGAATGATTTTTGCGTTCGA > 1:2481171/1‑68 ATTAAAGTACAATTGAGTGAAACGCATGCAATCCATTCATTTACTTAGAGAATGATTTTTGCGTTCGA > 1:1084858/1‑68 TTAAAGTACAATTGAGTGAAACGCATGCAATCCATTCATTTACTTAGAGAATGATTTTTGCGTTCGA > 1:2306456/1‑67 TTAAAGTACAATTGAGTGAAACGCATGCAATCCATTCATTTACTTAGAGAATGATTTTTGCGTTCGA > 1:2943477/1‑67 TTAAAGTACAATTGAGTGAAACGCATGCAATCCATTCATTTACTTAGAGAATGATTTTTGCGTTCGA > 1:422747/1‑67 TTAAAGTACAATTGAGTGAAACGCATGCAATCCATTCATTTACTTAGAGAATGATTTTTGCGTTCGA > 1:1113806/1‑67 TTAAAGTACAATTGAGTGAAACGCATGCAATCCATTCATTTACTTAGAGA < 1:1752728/50‑1 TTAAAGTACAATTGAGTGAAACGCATGCAATCCATTCATTTACTTAGAGA < 1:93279/50‑1 GCACCGTGCTTTCATCTATCGAACGCAAAAATCATTCTCTAAGTAAATGAATGGATTGCATGCGTTTCACTCAATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1401058‑1401133‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaattAAAGTACAATTGAGTGAAACGCATGCAATCCATTCATTTACTTAGAGAATGATTTTTGCGTTCGATA < Exported/1401140‑1401074 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |