| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 1596603 | 42 (0.710) | 5 (0.100) | 3/86 | NT | 12.8% | intergenic (‑17/+287) | cysP/ucpA | thiosulfate transporter subunit/predicted oxidoredutase, sulfate metabolism protein |
| ? | Exported | = 1596628 | 33 (0.660) | intergenic (‑42/+262) | cysP/ucpA | thiosulfate transporter subunit/predicted oxidoredutase, sulfate metabolism protein | |||||
CAGCAGCAGAGAAGCGACCAGCGCGAGTGAGTTCTTTTTCAGTAAGTTAACGGCCATTGCGCACCCTTATAAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1596530‑1596603‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttataaatATGATGGCTATTAGAAAGTCATTAAATTTATAAGGGTGCGCAATGGCCGTTAACTTACTGAAAAA < Exported/1596628‑1596564 CAGCAGCAGAGAAGCGACCAGCGCGAGTGAGTTCTTTTTCAGTAAGTTAACGGCCATTGCGCACCCTTAT > 1:3106014/1‑70CAGCAGCAGAGAAGCGACCAGCGCGAGTGAGTTCTTTTTCAGTAAGTTAACGGCCATTGCGCACCCTTA > 1:2073210/1‑69 AGCAGCAGAGAAGCGACCAGCGCGAGTGAGTTCTTTTTCAGTAAGTTAACGGCCATTGCGCACCCTTATAA < 1:2212675/71‑1 CAGCAGAGAAGCGACCAGCGCGAGTGAGTTCTTTTTCAGTAAGTTAACGGCCATTGCGCACCCTTATAAAT < 1:1742499/71‑1 GCGACCAGCGCGAGTGAGTTCTTTTTCAGTAAGTTAACGGCCATTGCGCACCCT < 1:793262/54‑1 GCGACCAGCGCGAGTGAGTTCTTTTTCAGTAAGTTAACGGCCATTGCGCACCCT < 1:2648710/54‑1 GCGACCAGCGCGAGTGAGTTCTTTTTCAGTAAGTTAACGGCCATTGCGCACCCT < 1:2873244/54‑1 CTTTTTCAGTAAGTTAACGGCCATTGCGCACCCTTATAA < 1:1147143/39‑1 CTTTTTCAGTAAGTTAACGGCCATTGCGCACCCTTATAA < 1:61161/39‑1 AAGTTAACGGCCATTGCGCACCCTTATAAATATGATGGCTATTAGAAAGTCATTAAATTTAT > 1:209834/1‑62 AAGTTAACGGCCATTGCGCACCCTTATAAATATGATGGCTATTAGAAAGTCATTAAATTTAT > 1:3375690/1‑62 GTTAACGGCCATTGCGCACCCTTATAAATATGATGGCTATTAGAAAGTCATTAA < 1:2875484/54‑1 TAACGGCCATTGCGCACCCTTATAAATATGATGGCTATTAGAAAGTCATTAAAT > 1:1321075/1‑54 TAACGGCCATTGCGCACCCTTATAAATATGATGGCTATTAGAAAGTCATTAAAT > 1:1391885/1‑54 TTATAAATATGATGGCTATTAGAAAGTCATTAAATTTATAAGGGTGCGCAATGGCCGTTAACTTACTGAAA < 1:1272846/71‑1 TTATAAATATGATGGCTATTAGAAAGTCATTAAATTTATAAGGGTGCGCAAT < 1:1393187/52‑1 TTATAAATATGATGGCTATTAGAAAGTCATTAAATTTA < 1:664609/38‑1 ATAAATATGATGGCTATTAGAAAGTCATTAAATTTATAAGGGTGCGCAATGGCCGTTAACTTACTGAAA > 1:2743209/1‑69 ATAAATATGATGGCTATTAGAAAGTCATTAAATTTATAAGGGTGCGCAATGGCCGTTAACTTACTGAAA > 1:1537788/1‑69 ATAAATATGATGGCTATTAGAAAGTCATTAAATTTATAAGGGTGCGCAA > 1:3063773/1‑49 TAAATATGATGGCTATTAGAAAGTCATTAAATTTGTAAGGGTGCGCAATGGCCGTTAACTTACTGAAAAA < 1:2101353/70‑1 TATGATGGCTATTAGAAAGTCATTAAATTTATAAGGGTGCGC < 1:881273/42‑1 CAGCAGCAGAGAAGCGACCAGCGCGAGTGAGTTCTTTTTCAGTAAGTTAACGGCCATTGCGCACCCTTATAAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1596530‑1596603‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttataaatATGATGGCTATTAGAAAGTCATTAAATTTATAAGGGTGCGCAATGGCCGTTAACTTACTGAAAAA < Exported/1596628‑1596564 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |