| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 1596603 | 42 (0.710) | 5 (0.100) | 3/86 | NT | 12.8% | intergenic (‑17/+287) | cysP/ucpA | thiosulfate transporter subunit/predicted oxidoredutase, sulfate metabolism protein |
| ? | Exported | = 1596628 | 33 (0.660) | intergenic (‑42/+262) | cysP/ucpA | thiosulfate transporter subunit/predicted oxidoredutase, sulfate metabolism protein | |||||
AGTTCTTTTTCAGTAAGTTAACGGCCATTGCGCACCCTTATAAATTTAATGACTTTCTAATAGCCATCATATTTATAACGGACGTGAAAGGAGTAACGGTTTTATATACCGTTTGGTGATTTGGAAGTTGA > Exported/1596559‑1596689 | agtTCTTTTTCAGTAAGTTAACGGCCATTGCGCACCCTTATAAATTTAATGACTTTCTAATAGCcatcat < 1:3495843/70‑1 (MQ=255) tttttCAGTAAGTTAACGGCCATTGCGCACCCTTACAAATTTAATGACTTTCTAATAGCCATCATattta < 1:2101353‑M2/70‑6 (MQ=255) tttCAGTAAGTTAACGGCCATTGCGCACCCTTATAAATTTAATGACTTTCTAATAGCCATCATatttataa < 1:1272846‑M2/71‑9 (MQ=255) tttCAGTAAGTTAACGGCCATTGCGCACCCTTATAAATTTAATGACTTTCTAATAGCCATCATatttat > 1:2743209‑M2/1‑63 (MQ=255) tttCAGTAAGTTAACGGCCATTGCGCACCCTTATAAATTTAATGACTTTCTAATAGCCATCATatttat > 1:1537788‑M2/1‑63 (MQ=255) aGTAAGTTAACGGCCATTGCGCACCCTTATAAATTTAATGACTTTCTAATAGCCATCATATTTATAACGGa > 1:3395923/1‑71 (MQ=255) tAAGTTAACGGCCATTGCGCACCCTTATAAATTTAATGACTTTCTAATAGCCATCATATTTATAACGGACg > 1:2111435/1‑71 (MQ=255) tAAGTTAACGGCCATTGCGCACCCTTATAAATTTAATGACTTTCTAATAGCCATCATATTTATAACGGACg > 1:720096/1‑71 (MQ=255) aGTTAACGGCCATTGCGCACCCTTATAAATTTAATGACTTTCTAATAGCCATCATATTTATAACGGACGTg < 1:2873909/71‑1 (MQ=255) tAACGGCCATTGCGCACCCTTATAAATTTAATGACTTTCTAATAGCCATCATATTTATAACGGACGTGa > 1:175923/1‑69 (MQ=255) aaCGGCCATTGCGCACCCTTATAAATTTAATGACTTTCTAATAGCCATCATATTTATAACGGACGTGaaa < 1:3689967/70‑1 (MQ=255) ccATTGCGCACCCTTATAAATTTAATGACTTTCTAATAGCCATCATATTTATAACGGACGTGAAAGGAGt > 1:3631775/1‑70 (MQ=255) cATTGCGCACCCTTATAAATTTAATGACTTTCTAATAGCCATCATATTTATAACGTACGTGAAAGGAGTaa < 1:1472263/71‑1 (MQ=255) aTTGCGCACCCTTATAAATTTAATGACTTTCTAATAGCCATCATatttataa < 1:1393187‑M2/52‑9 (MQ=255) ttGCGCACCCTTATAAATTTAATGACTTTCTAATAGCCATCATatttat > 1:3063773‑M2/1‑43 (MQ=255) ttGCGCACCCTTATAAATTTAATGACTTTCTAATAGCCATCATATTTATAACGGACGTGAAAGGAg < 1:3583325/66‑1 (MQ=255) tGCGCACCCTTATAAATTTAATGACTTTCTAATAGCCATCATATTTATAACGGACGTGAAAGGAGTAACgg > 1:694576/1‑71 (MQ=255) gcgcACCCTTATAAATTTAATGACTTTCTAATAGCCATCATa < 1:881273‑M2/42‑2 (MQ=255) gcgcACCCTTATAAATTTAATGACTTTCTAATAGCCATCATATTTATAACGGACGTGAAAGGAGTAACGGt > 1:617161/1‑71 (MQ=255) gcgcACCCTTATAAAGTTAATGACTTTCTAATAGCCATCATATTTATAACGGACGt > 1:1562999/1‑56 (MQ=255) gcACCCTTATAAATTTAATGACTTTCTAATAGCCATCATATTTATAACGGACGTGaa < 1:1732494/57‑1 (MQ=255) aCCCTTATAAATTTAATGACTTTCTAATAGCCATCATATTTATAACGGACGTGAAAGGAGTAACGGTTTta < 1:1769998/71‑1 (MQ=255) aCCCTTATAAATTTAATGACTTTCTAATAGCCATCATATTTATAACGGACGTGAAAGGAGTAACGGTTTta < 1:512300/71‑1 (MQ=255) aCCCTTATAAATTTAATGACTTTCTAATAGCCATCATATTTATAACGGACGTGAAAGGAGTAACGGTTTta < 1:1491028/71‑1 (MQ=255) cccTTATAAATTTAATGACTTTCTAATAGCCATCATATTTATAACGGACGTGAAAGGAGTAACGGTTTta < 1:2666834/70‑1 (MQ=255) ccTTATAAATTTAATGACTTTCTAATAGCCATCATATTTATAACGGACGTGAAAGGAGTAACGGtttt < 1:32837/68‑1 (MQ=255) ccTTATAAATTTAATGACTTTCTAATAGCCATCATATTTATAACGGACGTGAAAGGAGTAACGGtttt < 1:1220605/68‑1 (MQ=255) cTTATAAATTTAATGACTTTCTAATAGCCATCATATTTATAACGGACGTGAAAGGAGTAACGGTTTtatat < 1:2526638/71‑1 (MQ=255) ttATAAATTTAATGACTTTCTAATAGCCATCATATTTATAACGGACGTGAAAGGAGTa < 1:332727/58‑1 (MQ=255) ataAATTTAATGACTTTCTAATAGCCATCATatttataagggtgcgcaatggccgttaactt > 1:209834‑M2/1‑31 (MQ=255) ataAATTTAATGACTTTCTAATAGCCATCATatttataagggtgcgcaatggccgttaactt > 1:3375690‑M2/1‑31 (MQ=255) ataAATTTAATGACTTTCTAATAGCCATCATATTTATAACGGACGTGAAAGGAGTAACGGTTTTATATAcc > 1:419111/1‑71 (MQ=255) ataAATTTAATGACTTTCTAATAGCCATCATATTTATAACGGACGTGAAAGGAGTAACGGTTTTATATAcc > 1:268690/1‑71 (MQ=255) taAATTTAATGACTTTCTAATAGCCATCATatttataa < 1:664609‑M2/38‑9 (MQ=255) aTTTAATGACTTTCTAATAGCCATCATatttataagggtgcgcaatggccgtta > 1:1391885‑M2/1‑27 (MQ=255) aTTTAATGACTTTCTAATAGCCATCATatttataagggtgcgcaatggccgtta > 1:1321075‑M2/1‑27 (MQ=255) aTTTAATGACTTTCTAATAGCCATCATATTTATAACGGACGTGAAAGGAGTAACGGTTTTATATACCGttt < 1:3049072/71‑1 (MQ=255) tttAATGACTTTCTAATAGCCATCATATTTATAACGGACGTGAAAGGAGTAACGGttt < 1:985416/58‑1 (MQ=255) tttAATGACTTTCTAATAGCCATCATATTTATAACGGACGTGAAAGGAGTAACGGttt < 1:1601100/58‑1 (MQ=255) ttAATGACTTTCTAATAGCCATCATatttataagggtgcgcaatggccgttaac < 1:2875484‑M2/54‑30 (MQ=255) tAATGACTTTCTAATAGCCATCATATTTATAACGGACGTGAAAGGa > 1:1198177/1‑46 (MQ=255) tAATGACTTTCTAATAGCCATCATATTTATAACGGACGTGAAAGGAGTAACGGTTTta > 1:723603/1‑58 (MQ=255) tAATGACTTTCTAATAGCCATCATATTTATAACGGACGTGAAAGGAGTAACGGTTTTATATACCGTTTgg < 1:3361484/70‑1 (MQ=255) tttCTAATAGCCATCATATTTATAACGGACGTGAAAGGAg < 1:3128304/40‑1 (MQ=255) tCTAATAGCCATCATATTTATAACGGACGTGAAAGGAGTa > 1:269623/1‑40 (MQ=255) tCTAATAGCCATCATATTTATAACGGACGTGAAAGGAGTAACGGTTTTATATACCGTTTGGTGATTTGGa < 1:1586304/70‑1 (MQ=255) cTAATAGCCATCATCTTTATAACGGACGTGAAAGGAGTAACGGTTTTATATACCGTTTGGTGATTTGGAAg > 1:650176/1‑71 (MQ=255) tAGCCATCATATTTATAACGGACGTGAAAGGAGTAACGGTTTTATATACCGTTTGGTGATTTGGAAGTTGa < 1:1725147/71‑1 (MQ=255) tcatATTTATAACGGACGTGAAAGGAGTAACGGTTTtata < 1:2541906/40‑1 (MQ=255) tcatATTTATAACGGACGTGAAAGGAGTAACGGTTTtata < 1:2333695/40‑1 (MQ=255) tcatATTTATAACGGACGTGAAAGGAGTAACGGTTTtata < 1:1574860/40‑1 (MQ=255) | AGTTCTTTTTCAGTAAGTTAACGGCCATTGCGCACCCTTATAAATTTAATGACTTTCTAATAGCCATCATATTTATAACGGACGTGAAAGGAGTAACGGTTTTATATACCGTTTGGTGATTTGGAAGTTGA > Exported/1596559‑1596689 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |