New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | Exported | 1607174 = | 23 (0.390) | 4 (0.070) | 3/94 | NT | 16.3% | coding (892/900 nt) | hemF | coproporphyrinogen III oxidase |
? | Exported | 1607197 = | 20 (0.370) | coding (1044/1053 nt) | yfeG | predicted DNA‑binding transcriptional regulator |
TGACGCTGCATCAGCGGATGCGGGAGTGGGGGTGAGGGAGTTACACCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1607222‑1607174 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccaCTCCCGCATCCGCTGATGCAGCGTCAGTGACGGCTTCTCGGAAAACAGCTGCTGGTAATCCGTGGCAA > Exported/1607197‑1607264 TGACGCTGCATCAGCGGATGCGGGAGTGGGGGTGAGGGAGTTACACCC < 1:817304/48‑1 GTGGGGGTGAGGGAGTTACACCCACTCCCGCATCCTCTTATGCAGCGTCAGTGACGGCTTCTCGGAAAA > 1:3396590/1‑69 GGGGTGAGGGAGTTACACCCACTCCCGCATCCGCTGATGCAGCGTCAGTGACGGCTTCT < 1:2685216/59‑1 GGGTGAGGGAGTTACACCCACTCCCGCATCCGCTGATGCAGCGTCAGTGACGGC > 1:1857599/1‑54 GGGTGAGGGAGTTACACCCACTCCCGCATCCGCTGATGCAGCGTCAGTGACGGC > 1:2784856/1‑54 CCCACTCCCGCATCCGCTGATGCAGCGTCAGTGACGGCTTCTCGGAAAACAGCTGCTGGTAATCCGTGGCA < 1:2459882/71‑1 CCACTCCCGCATCCGCTGATGCAGCGTCAGTGACGGCTTCTCGGAAAACAGCTGCTGGTAATCCGTGGCAA < 1:857315/71‑1 ACTCCCGCATCCGCTGATGCAGCGTCAGTGACGGCTTCTCGGAAAACAGCTGCTGGTAA > 1:2432957/1‑59 ACTCCCGCATCCGCTGATGCAGCGTCAGTGACGGCTTCTCGGAAAACAGCTGCTGGTAA > 1:3554060/1‑59 TGACGCTGCATCAGCGGATGCGGGAGTGGGGGTGAGGGAGTTACACCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1607222‑1607174 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccaCTCCCGCATCCGCTGATGCAGCGTCAGTGACGGCTTCTCGGAAAACAGCTGCTGGTAATCCGTGGCAA > Exported/1607197‑1607264 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |