| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 1735002 | 54 (0.920) | 6 (0.120) | 3/88 | NT | 9.9% | coding (154/729 nt) | recO | gap repair protein |
| ? | Exported | = 1735012 | 63 (1.240) | coding (144/729 nt) | recO | gap repair protein | |||||
AGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1734926‑1735002‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaaaggTGCATTACAGCCTTTCACCCCTCTCTTGCTACGTTTTGGCGGGCGTGGCGAAGTCAAAACGCTGCGCAGT < Exported/1735012‑1734943 AGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGT > 1:3442803/1‑71 GAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAA < 1:1321374/71‑1 GAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAA < 1:2638681/71‑1 CGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAGGTGCATTACAGCCTTT < 1:3186171/55‑1 CGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAGG > 1:2891974/1‑40 CCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAGGTGCATTACAGCCTTTCA > 1:1212414/1‑55 CAAAACGTAGCAAGAGAGGGGTGAAAGGTGCATTACA < 1:2892750/37‑1 CAAAACGTAGCAAGAGAGGGGTGAAAGGTGCATTACA < 1:700421/37‑1 CAAAACGTAGCAAGAGAGGGGTGAAAGGTGCATTACA < 1:384877/37‑1 CAAAACGTAGCAAGAGAGGGGTGAAAGGTGCATTACA < 1:380556/37‑1 TGAAAGGTGCATTACAGCCTTTCACCCCTCTCTTGCTACGTTTTGGCGGGCGTGGCGAA < 1:2513263/59‑1 TGAAAGGTGCATTACAGCCTTTCACCCCTCTCTTGCTACGTTTTGGCGGGCGTGGCGAA < 1:10935/59‑1 TGAAAGGTGCATTACAGCCTTTCACCCCTCTCTTGCTACGTTTTGGCGGGCGTGGCGAA < 1:2934922/59‑1 TGAAAGGTGCATTAC‑‑CCTTTCACCCCTCTCTTGCTACGTTTTGGTGGGCGTGGCGAA < 1:384306/57‑1 GAAAGGTGCATTACAGCCTTTCACCCCTCTCTTGCTACGTTTTGGCGGGCGTGGCGAAGTCAAAACGCTGC > 1:615470/1‑71 AAAGGTGCATTACAGCCTTTCACCCCTCTCTTGCTACGTTTTGGCGGGCGTGGCGAAGTCAAAACGCTGCG > 1:693875/1‑71 AAAGGTGCATTACAGCCTTTCACCCCTCTCTTGCTACGTTTTGGCGGGCGTGGCGAAGTCAAAACGCTGCG < 1:1243062/71‑1 AAAGGTGCATTACAGCCTTTCACCCCTCTCTTGCTACGTTTTGGCGGGCGTGGCGAAGTCAAAACGCTG < 1:2472408/69‑1 AAAGGTGCATTACAGCCTTTCACCCCTCTCTTGCTACGTTTTGGCGGGCGTGGC < 1:2946481/54‑1 AAAGGTGCATTACAGCCTTTCACCCCTCTCTTGCTACGTTTTGGCGGGCGTGGC < 1:1078786/54‑1 AAGGTGCATTACAGCCTTTCACCCCTCTCTTGCTACGTTTTGGCGGGCGTGGCGAAGTCAAAACGCTGCGC < 1:116804/71‑1 AAGGTGCATTACAGCCTTTCACCCCTCTCTTGCTACGTTTTGGCGGGCGTGGCGAAGTCAAAACGCTGCGC < 1:1887752/71‑1 AGGTGCATTACAGCCTTTCACCCCTCTCTTGCTACGTTTTGGCGGGCGTGGCGAAGTCAAAACGCTGCGCA < 1:3123735/71‑1 AGGTGCATTACAGCCTTTCACCCCTCTCTTGCTACGTTTTGGCGGGCGTGGCGAAGTCAAAACGCTGCGCA < 1:3688815/71‑1 AGGTGCATTACAGCCTTTCACCCCTCTCTTGCTACGTTTTGGCGGGCGTGGCGAAGTCAAAACGCTGCGCA < 1:1241214/71‑1 GGTGCATTACAGCCTTTCACCCCTCTCTTGCTACGTTTTGGCGGGCGTGGCGAAGTCAAAACGCTGCGCAG < 1:1517294/71‑1 GTGCATTACAGCCTTTCACCCCTCTCTTGCTACGTTTTGGCGGGCGTGGCGAAGTCAAAACGCTGCGCAGT < 1:2813654/71‑1 GTGCATTACAGCCTTTCACCCCTCTCTTGCTACGTT < 1:3324312/36‑1 AGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1734926‑1735002‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaaaggTGCATTACAGCCTTTCACCCCTCTCTTGCTACGTTTTGGCGGGCGTGGCGAAGTCAAAACGCTGCGCAGT < Exported/1735012‑1734943 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |