| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 1908504 | 46 (0.780) | 4 (0.080) | 3/92 | NT | 9.4% | coding (962/3369 nt) | recC | exonuclease V (RecBCD complex), gamma chain |
| ? | Exported | = 1908524 | 36 (0.680) | coding (942/3369 nt) | recC | exonuclease V (RecBCD complex), gamma chain | |||||
CAGTTCCAGAATGTCAGACTGAATGTTATGCAGCAGGTTATCTGGCGTGACATCGACAAAGGCGTCCAGCTCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1908431‑1908504‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcctTTCTGACCTGGAGAGCAGCCAGGAGCTGGACGCCTTTGTCGATGTCACGCCAGATAACCTGCTGCATAA < Exported/1908524‑1908456 CAGTTCCAGAATGTCAGACTGAATGTTATGCAGCAGGTTATCTGGCGTGACATCGACAAAGGCGTCCAGCT > 1:2264781/1‑71 GTTCCAGAATGTCAGACTGAATGTTATGCAGCAGGTTATCTGGCGTGACATCGACAAAGGCGTCCAGCTCC < 1:1566426/71‑1 CCAGAATGTCAGACTGAATGTTATGCAGCAGGTTATCTGGCGTGACATCGACAAAGGCGTCCAGCT > 1:1531370/1‑66 CCAGAATGTCAGACTGAATGTTATGCAGCAGGTTATCTGGCGTGACATCGACAAAGGCGTCCAGCT > 1:1707474/1‑66 ATGTCAGACTGAATGTTATGCAGCAGGTTATCTGGCGTGACATCGACAAAGGCGTCCAGCT > 1:360176/1‑61 TGAATGTTATGCAGCAGGTTATCTGGCGTGACATCGACAAAGGCGTCCAGCTCCT < 1:840701/55‑1 TGACATCGACAAAGGCGTCCAGCTCCTTTCTGACCTGGAGAGCAGCCA < 1:1415089/48‑1 ACATCGACAAAGGCGTCCAGCTCCTTTCTGACCTGGAGAGCAGCCAGG > 1:1703419/1‑48 ACATCGACAAAGGCGTCCAGCTCCTTTCTGACCTGGAGAGCAGCCAG < 1:3711894/47‑1 ACATCGACAAAGGCGTCCAGCTCCTTTCTGACCTGGAGAGCAGCCAG < 1:983679/47‑1 TCCTTTCTGACCTGGAGAGCAGCCAGGAGCTGGACGCCTTTGTCGA > 1:364544/1‑46 CTTTCTGACCTGGAGAGCAGCCAGGAGCTGGACGCCTTTGTCGATGTCACGCC > 1:1267420/1‑53 CTTTCTGACCTGGAGAGCAGCCAGGAGCTGGACGCCTTTGTCGATGTCACGCC > 1:147787/1‑53 TTTCTGACCTGGAGAGCAGCCAGGAGCTGGACGCCTTTGTCGATGTCACGCCAGATAACCTGCTGCATAA > 1:2144890/1‑70 CAGTTCCAGAATGTCAGACTGAATGTTATGCAGCAGGTTATCTGGCGTGACATCGACAAAGGCGTCCAGCTCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1908431‑1908504‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcctTTCTGACCTGGAGAGCAGCCAGGAGCTGGACGCCTTTGTCGATGTCACGCCAGATAACCTGCTGCATAA < Exported/1908524‑1908456 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |