| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 1908504 | 46 (0.780) | 4 (0.080) | 3/92 | NT | 9.4% | coding (962/3369 nt) | recC | exonuclease V (RecBCD complex), gamma chain |
| ? | Exported | = 1908524 | 36 (0.680) | coding (942/3369 nt) | recC | exonuclease V (RecBCD complex), gamma chain | |||||
TTATGCAGCAGGTTATCTGGCGTGACATCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAGTCGCGCCCAAGCTTACCCCATGAAGCCAGCAGCGGGTTGCCGACATCCTGTT > Exported/1908456‑1908591 | ttATGCAGCAGGTTATCTGGCGTGACATCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAa > 1:2144890‑M2/1‑69 (MQ=255) gcagGTTATCTGGCGTGACATCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATaa < 1:2024499/71‑1 (MQ=255) gcagGTTATCTGGCGTGACATCGACAAAGGCGTCCAGCTCCTGGCTGCTCTACAGGTCAGAAAGGAGATaa < 1:3246478/71‑1 (MQ=255) cagGTTATCTGGCGTGACATCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATaaa > 1:2940100/1‑71 (MQ=255) cagGTTATCTGGCGTGACATCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATaaa > 1:864308/1‑71 (MQ=255) cagGTTATCTGGCGTGACATCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATaaa > 1:3034612/1‑71 (MQ=255) cagGTTATCTGGCGTGACATCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATaaa > 1:2686015/1‑71 (MQ=255) cagGTTATCTGGCGTGACATCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATaaa > 1:3156546/1‑71 (MQ=255) cagGTTATCTGGCGTGACATCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATaaa > 1:2111241/1‑71 (MQ=255) ggTTATCTGGCGTGACATCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATg > 1:41440/1‑71 (MQ=255) ggTTATCTGGCGTGACATCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATg > 1:3338138/1‑71 (MQ=255) aTCTGGCGTGACATCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAGt > 1:2962938/1‑71 (MQ=255) tCTGGCGTGACATCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAg < 1:245501/69‑1 (MQ=255) ggCGTGACATCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAag > 1:1267420‑M2/1‑51 (MQ=255) ggCGTGACATCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAag > 1:147787‑M2/1‑51 (MQ=255) ggCGTGACATCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAGTcgcg > 1:3516886/1‑71 (MQ=255) gCGTGACATCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAGTCgcgc < 1:2228874/71‑1 (MQ=255) gTGACATCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAGTCGCGccc < 1:2068771/71‑1 (MQ=255) tGACATCGACAAAGGCGTTCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGAt < 1:2535923/54‑1 (MQ=255) tGACATCGACAAAGGCGTTCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGAt < 1:2694795/54‑1 (MQ=255) aCATCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAGTCGCGCCCaa < 1:86722/70‑1 (MQ=255) aTCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATg < 1:1573949/55‑1 (MQ=255) aTCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAGTCGCGCCCAAGc < 1:3250653/70‑1 (MQ=255) aTCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAGTCGCGCCCAAGCt > 1:3681797/1‑71 (MQ=255) tCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAagga > 1:364544‑M2/1‑42 (MQ=255) tCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGAt < 1:2949969/49‑1 (MQ=255) tCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAGTCGCGCCCAAGCtt < 1:3690339/71‑1 (MQ=255) tCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAGTCGCGCCCAAGCtt < 1:3718878/71‑1 (MQ=255) tCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAGTCGCGCCCAAGCtt < 1:796307/71‑1 (MQ=255) aCAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAGTCGCGcc < 1:3520084/61‑1 (MQ=255) aCAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAGTCGCGCCCAAGCTTAcc < 1:1319765/71‑1 (MQ=255) aaaGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATaa < 1:2348777/46‑1 (MQ=255) aaGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAGTcgc > 1:3089395/1‑55 (MQ=255) aaGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAGTcgc > 1:980017/1‑55 (MQ=255) aaGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAGTcgc > 1:201520/1‑55 (MQ=255) gCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAGTCGCGcc < 1:2908032/55‑1 (MQ=255) gCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAGTCGCGcc < 1:2660355/55‑1 (MQ=255) gCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAGTCGCGcc < 1:2327812/55‑1 (MQ=255) cAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAGTCGCGCCCAAGCTTACCCCATGAAGcc < 1:474187/70‑1 (MQ=255) aGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAGTCGCGCCCa < 1:295873/51‑1 (MQ=255) cTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAGTCGCGCCCAAGCTTAcccc > 1:3623195/1‑59 (MQ=255) tCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAGTCGCGCCCAAGCTTACCCCATGAAGCcagcag > 1:2426499/1‑71 (MQ=255) ccTGGCTGCTCTCCAGGTCAGAAaggagctggacgcctttgtcgatgt > 1:1703419‑M2/1‑23 (MQ=255) cTGGCTGCTCTCCAGGTCAGAAaggagctggacgcctttgtcgatgt < 1:983679‑M2/47‑26 (MQ=255) cTGGCTGCTCTCCAGGTCAGAAaggagctggacgcctttgtcgatgt < 1:3711894‑M2/47‑26 (MQ=255) tGGCTGCTCTCCAGGTCAGAAaggagctggacgcctttgtcgatgtca < 1:1415089‑M2/48‑28 (MQ=255) ggCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAGTCGCGCCCAAGCTTACCCCATGAAGCCAGCAGCggg > 1:2605899/1‑71 (MQ=255) gctgctCTCCAGGTCAGAAAGGAGATAAATGTAGTCGCGCCCAAGCTTACCCCATGAAGCCAGCAGCggg < 1:2177131/70‑1 (MQ=255) gctgctCTCCAGGTCAGAAAGGAGATAAATGTAGTCGCGCCCAAGCTTACCCCATGAAGCCAGCAGCggg < 1:2366236/70‑1 (MQ=255) gctgctCTCCAGGTCAGAAAGGAGATAAATGTAGTCGCGCCCAAGCTTACCCCATGAAGCCAGCAGCgg < 1:140971/69‑1 (MQ=255) ctcCAGGTCAGAAAGGAGATAAATGTAGTCGCGCCCAAGCTTAc < 1:3546842/44‑1 (MQ=255) tcCAGGTCAGAAAGGAGATAAATGTAGTCGCGCCCAAGCTTACCCCATGAAGCCAGCAGCGGGTTGCCGa > 1:1845059/1‑70 (MQ=255) ccAGGTCAGAAAGGAGATAAATGTAGTCGCGCCCAAGCTTAccc > 1:76320/1‑44 (MQ=255) ccAGGTCAGAAAGGAGATAAATGTAGTCGCGCCCAAGCTTACCCCAt < 1:2234816/47‑1 (MQ=255) aGGTCAGAAAGGAGATAAATGTAGTCGCGCCCAAGCTTACCCCATGa > 1:3062724/1‑47 (MQ=255) aGGTCAGAAAGGAGATAAATGTAGTCGCGCCCAAGCTTACCCCATGAAGCCAGCAGCGGGTTGCCGACATc < 1:143701/71‑1 (MQ=255) gAAAGGAGATAAATGTAGTCGCGCCCAAGCTTACCCCATGAAGCCAGCAGCGGGTTGCCGACATCCTGtt > 1:336724/1‑70 (MQ=255) gAAAGGAGATAAATGTAGTCGCGCCCAAGCTTACCCCATGAAGCCAGCAGCGGGTTGCCGACATCCTGtt > 1:479541/1‑70 (MQ=255) | TTATGCAGCAGGTTATCTGGCGTGACATCGACAAAGGCGTCCAGCTCCTGGCTGCTCTCCAGGTCAGAAAGGAGATAAATGTAGTCGCGCCCAAGCTTACCCCATGAAGCCAGCAGCGGGTTGCCGACATCCTGTT > Exported/1908456‑1908591 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |