| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 1958332 = | 38 (0.640) | 15 (0.290) | 4/88 | NT | 34.6% | coding (262/660 nt) | rpiA | ribosephosphate isomerase, constitutive |
| ? | Exported | 1958358 = | 24 (0.470) | coding (236/660 nt) | rpiA | ribosephosphate isomerase, constitutive | |||||
GGCATTCACGTTTTTGATCTCAACGAAGTCGACAGCCTTGGCATCTACGTTGATGGCGCAGATGAAATCAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1958404‑1958332‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaacgTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCTTTTCAGTTTTTCAGTGG > Exported/1958358‑1958427 GGCATTCACGTTTTTGATCTCAACGAAGTCGACAGCCTTGGCATCTACGTTGATGGCGCAGATGAAATCAA < 1:2148862/71‑1GGCATTCACGTTTTTGATCTCAACGAAGTCGACAGCCTTGGCATCTACGTTGATGGCGCAGATGAAATCAA > 1:3737120/1‑71GGCATTCACGTTTTTGATCTCAACGAAGTCGACAGCCTTGGCATCTACGTTGATGGCGCAGATGAAATCA < 1:2639378/70‑1 CATTCACGTTTTTGATCTCAACGAAGTCGACAGCCTTGGCATCTACGTTGATGGCGCAGATGAAATCAACG < 1:1646427/71‑1 CATTCACGTTTTTGATCTCAACGAAGTCGACAGCCTTGGCATCTACGTTGATGGCGCAGATGAAATCAACG < 1:3736180/71‑1 TTTGATCTCAACGAAGTCGACAGCCTTGGCATCTACGTTGATGGCGCAGATGAAATC < 1:3440530/57‑1 TTTGATCTCAACGAAGTCGACAGCCTTGGCATCTACGTTGATGGCGCAGATGAAATC < 1:1649898/57‑1 TGATCTCAACGAAGTCGACAGCCTTGGCATCTACGTTGATGGCGCAGATGAAATCAA > 1:1111499/1‑57 TGATCTCAACGAAGTCGACAGCCTTGGCATCTACGTTGATGGCGCAGATGAAATCAA > 1:1587318/1‑57 TGATCTCAACGAAGTCGACAGCCTTGGCATCTACGTTGATGGCGCAGATGAAATCAA > 1:835323/1‑57 TGATCTCAACGAAGTCGACAGCCTTGGCATCTACGTTGATGGCGCAGATGAAATCAA > 1:2595538/1‑57 CGTTGATGGCGCAGATGAAATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGA > 1:189154/1‑56 CGTTGATGGCGCAGATGAAATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGA > 1:2363629/1‑56 CGTTGATGGCGCAGATGAAATCAACGTAGATGCCAAGGCTGTCGACTTCGTT < 1:3475829/52‑1 CGTTGATGGCGCAGATGAAATCAACGTAGATGCCAAGGCTGTCGACTTCGTT < 1:3169761/52‑1 CGTTGATGGCGCAGATGAAATCAACGTAGATGCCAAGGCTGTCGACTTCGTT < 1:2500351/52‑1 CGTTGATGGCGCAGATGAAATCAACGTAGATGCCAAGGCTGTCGACTTCGTT < 1:561078/52‑1 CGTTGATGGCGCAGATGAAATCAACGTAGATGCCAAGGCTGTCGACTTCGTT < 1:626020/52‑1 CGTTGATGGCGCAGATGAAATCAACGTAGATGCCAAGGCTGTCGACTTCGTT < 1:1171004/52‑1 GTTGATGGCGCAGATGAAATCAACGTAGATGCCAAGGCTGTCGACTTCGTTG > 1:414468/1‑52 GTTGATGGCGCAGATGAAATCAACGTAGATGCCAAGGCTGTCGACTTCGTTG > 1:2947986/1‑52 GTTGATGGCGCAGATGAAATCAACGTAGATGCCAAGGCTGTCGACTTCGTTG > 1:3095456/1‑52 GTTGATGGCGCAGATGAAATCAACGTAGATGCCAAGGCTGTCGACTTCGTTG > 1:1458389/1‑52 GTTGATGGCGCAGATGAAATCAACGTAGATGCCAAGGCTGTCGACTTCGTTG > 1:3241749/1‑52 CGCAGATGAAATCAACGTAGATGCCAAGGGTGTCGACTTCG > 1:1531529/1‑41 CGCAGATGAAATCAACGTAGATGCCAAGGCTGTCGACTTCG > 1:2585140/1‑41 ATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCTTTTCAGTTTTT < 1:3629158/71‑1 ATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCTTTTCAGTTTTT < 1:204421/71‑1 ATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAA > 1:3599923/1‑42 TCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCTTTTCAGTTTTT > 1:2795495/1‑70 AACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCTTTT > 1:2553660/1‑60 AACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCTTTT > 1:186164/1‑60 AACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAA > 1:49374/1‑47 AACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAA > 1:224481/1‑47 AACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAA > 1:1620545/1‑47 AACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGA > 1:2987766/1‑46 ACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCTTTTCAGTTTTTCAGT > 1:992099/1‑71 ACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCTTTTCAGTTTTT < 1:3586757/67‑1 ACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCTTTTCAGTTTTT < 1:2560657/67‑1 ACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCTTTTCAGTTTTT < 1:2364698/67‑1 GTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCTTTTCAGTTTTTCAGTGG < 1:2260025/71‑1 GTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCTTTTCAGTTTTTCAGTGG < 1:492258/71‑1 GTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCTTTTCAGTTTTTCAGTGG < 1:847475/71‑1 GTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCTTTTCAGTTTTTCAGTG > 1:3475302/1‑70 GGCATTCACGTTTTTGATCTCAACGAAGTCGACAGCCTTGGCATCTACGTTGATGGCGCAGATGAAATCAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1958404‑1958332‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaacgTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCTTTTCAGTTTTTCAGTGG > Exported/1958358‑1958427 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |