| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 1958332 = | 38 (0.640) | 15 (0.290) | 4/88 | NT | 34.6% | coding (262/660 nt) | rpiA | ribosephosphate isomerase, constitutive |
| ? | Exported | 1958358 = | 24 (0.470) | coding (236/660 nt) | rpiA | ribosephosphate isomerase, constitutive | |||||
ACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCTTTTCAGTTTTTCAGTGG > Exported/1958288‑1958427 | aCGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGt < 1:1654358/71‑1 (MQ=255) gggTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAg < 1:2351410/71‑1 (MQ=255) ccgcgccgcCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAgg < 1:541861/71‑1 (MQ=255) cgcgccgcCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAgg < 1:431696/70‑1 (MQ=255) cgccgccgcCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTa < 1:1250204/58‑1 (MQ=255) ccgccTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGAc < 1:2234132/71‑1 (MQ=255) ccgccTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGAc > 1:2127704/1‑71 (MQ=255) gccTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTc > 1:3273184/1‑66 (MQ=255) gccTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTc > 1:731797/1‑66 (MQ=255) gccTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTc > 1:1895027/1‑66 (MQ=255) ttGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGtt > 1:2300256/1‑71 (MQ=255) tGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAg > 1:940882/1‑47 (MQ=255) tGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAg > 1:3731823/1‑47 (MQ=255) gATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGtt > 1:1433037/1‑69 (MQ=255) aTCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAg > 1:589794/1‑53 (MQ=255) cATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGtt > 1:2942716/1‑66 (MQ=255) tttGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCa < 1:3313753/71‑1 (MQ=255) cATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCaaaa < 1:3519386/70‑1 (MQ=255) ccGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAAt < 1:3606225/71‑1 (MQ=255) cgttgatggcgcagatgaaatcaacgTAGATGCCAAGGCTGTCGACTTCGtt < 1:626020‑M2/26‑1 (MQ=255) cgttgatggcgcagatgaaatcaacgTAGATGCCAAGGCTGTCGACTTCGtt < 1:2500351‑M2/26‑1 (MQ=255) cgttgatggcgcagatgaaatcaacgTAGATGCCAAGGCTGTCGACTTCGtt < 1:561078‑M2/26‑1 (MQ=255) cgttgatggcgcagatgaaatcaacgTAGATGCCAAGGCTGTCGACTTCGtt < 1:3475829‑M2/26‑1 (MQ=255) cgttgatggcgcagatgaaatcaacgTAGATGCCAAGGCTGTCGACTTCGtt < 1:3169761‑M2/26‑1 (MQ=255) cgttgatggcgcagatgaaatcaacgTAGATGCCAAGGCTGTCGACTTCGtt < 1:1171004‑M2/26‑1 (MQ=255) cgttgatggcgcagatgaaatcaacgTAGATGCCAAGGCTGTCGACTTCGTTgaga > 1:2363629‑M2/27‑56 (MQ=255) cgttgatggcgcagatgaaatcaacgTAGATGCCAAGGCTGTCGACTTCGTTgaga > 1:189154‑M2/27‑56 (MQ=255) CGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATg < 1:3736180‑M1/71‑1 (MQ=255) CGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATg < 1:1646427‑M1/71‑1 (MQ=255) gttgatggcgcagatgaaatcaacgTAGATGCCAAGGCTGTCGACTTCGTTg > 1:1458389‑M2/26‑52 (MQ=255) gttgatggcgcagatgaaatcaacgTAGATGCCAAGGCTGTCGACTTCGTTg > 1:3241749‑M2/26‑52 (MQ=255) gttgatggcgcagatgaaatcaacgTAGATGCCAAGGCTGTCGACTTCGTTg > 1:3095456‑M2/26‑52 (MQ=255) gttgatggcgcagatgaaatcaacgTAGATGCCAAGGCTGTCGACTTCGTTg > 1:414468‑M2/26‑52 (MQ=255) gttgatggcgcagatgaaatcaacgTAGATGCCAAGGCTGTCGACTTCGTTg > 1:2947986‑M2/26‑52 (MQ=255) TTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCa > 1:1587318‑M1/1‑57 (MQ=255) TTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCa > 1:1111499‑M1/1‑57 (MQ=255) TTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCa > 1:2595538‑M1/1‑57 (MQ=255) TTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCa > 1:835323‑M1/1‑57 (MQ=255) TTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGcc < 1:2148862‑M1/71‑1 (MQ=255) TTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGcc > 1:3737120‑M1/1‑71 (MQ=255) TGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGcc < 1:2639378‑M1/70‑1 (MQ=255) GATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCaaa < 1:1649898‑M1/57‑1 (MQ=255) GATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCaaa < 1:3440530‑M1/57‑1 (MQ=255) cgcagatgaaatcaacgTAGATGCCAAGGGTGTCGACTTCg > 1:1531529‑M2/18‑41 (MQ=255) cgcagatgaaatcaacgTAGATGCCAAGGCTGTCGACTTCg > 1:2585140‑M2/18‑41 (MQ=255) cATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGa > 1:1068435/1‑36 (MQ=255) aTCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCttt < 1:2883151/71‑1 (MQ=255) aTCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCttt < 1:315725/71‑1 (MQ=255) aTCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCttt < 1:1570588/71‑1 (MQ=255) aTCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCttt < 1:1566005/71‑1 (MQ=255) aTCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCttt < 1:1826812/71‑1 (MQ=255) aTCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCttt < 1:2015167/71‑1 (MQ=255) tCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCg < 1:1499355/39‑1 (MQ=255) tCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCg < 1:3676987/39‑1 (MQ=255) cTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCg < 1:2569460/38‑1 (MQ=255) ctccATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCtttt < 1:685168/65‑1 (MQ=255) cgcCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCttttcag < 1:808198/70‑1 (MQ=255) cgcCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCtttt < 1:3339944/67‑1 (MQ=255) cgcCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCtttt < 1:3592209/67‑1 (MQ=255) cgcCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCtttt < 1:768574/67‑1 (MQ=255) gcCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGAt < 1:293345/41‑1 (MQ=255) ccATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCttttcagttt > 1:3657316/1‑71 (MQ=255) cATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATc < 1:271617/40‑1 (MQ=255) cATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCttttcagtttt < 1:3324951/71‑1 (MQ=255) cATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCtttt < 1:2477702/64‑1 (MQ=255) atcaacgTAGATGCCAAGGCTGTCGACTTCGTTGAGATCaaa > 1:3599923‑M2/8‑42 (MQ=255) atcaacgTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCttttcagttttt < 1:3629158‑M2/64‑1 (MQ=255) atcaacgTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCttttcagttttt < 1:204421‑M2/64‑1 (MQ=255) tcaacgTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCttttcagttttt > 1:2795495‑M2/7‑70 (MQ=255) aacgTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGaa > 1:1620545‑M2/5‑47 (MQ=255) aacgTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGaa > 1:49374‑M2/5‑47 (MQ=255) aacgTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGaa > 1:224481‑M2/5‑47 (MQ=255) aacgTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGa > 1:2987766‑M2/5‑46 (MQ=255) aacgTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCtttt > 1:186164‑M2/5‑60 (MQ=255) aacgTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCtttt > 1:2553660‑M2/5‑60 (MQ=255) acgTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCttttcagtttttcagt > 1:992099‑M2/4‑71 (MQ=255) acgTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCttttcagttttt < 1:2364698‑M2/64‑1 (MQ=255) acgTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCttttcagttttt < 1:2560657‑M2/64‑1 (MQ=255) acgTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCttttcagttttt < 1:3586757‑M2/64‑1 (MQ=255) gTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCTTTTCAGTTTTTCAGTgg < 1:2260025‑M2/70‑1 (MQ=255) gTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCTTTTCAGTTTTTCAGTgg < 1:492258‑M2/70‑1 (MQ=255) gTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCTTTTCAGTTTTTCAGTgg < 1:847475‑M2/70‑1 (MQ=255) gTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCTTTTCAGTTTTTCAGTg > 1:3475302‑M2/2‑70 (MQ=255) | ACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATGCCGAGGCTTTTCAGTTTTTCAGTGG > Exported/1958288‑1958427 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |