| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 1999373 = | 38 (0.640) | 7 (0.170) | 3/72 | NT | 24.2% | intergenic (‑242/+50) | pitB/gss | phosphate transporter/fused glutathionylspermidine amidase and glutathionylspermidine synthetase |
| ? | Exported | 1999408 = | 17 (0.410) | intergenic (‑277/+15) | pitB/gss | phosphate transporter/fused glutathionylspermidine amidase and glutathionylspermidine synthetase | |||||
GTGATATTGAACCGTTAATTGTGGTGAAAAAGTAATACATGTTGTAGCAACCCCGTACTGATTATGAAGAATAATCAGTACGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1999457‑1999373‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ataatcagtacggggTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCACTCTCTTTTTTGATGACCAGT > Exported/1999408‑1999477 GTGATATTGAACCGTTAATTGTGGTGAAAAAGTAATACATGTTGTAGCAACCCCGTACTGATTATGAAGAA < 1:1250393/71‑1 TGATATTGAACCGTTAATTGTGGTGAAAAAGTAATACATGTTGTAGCAACCCCGTACTGATTATGAAGAAT < 1:2856711/71‑1 ATATTGAACCGTTAATTGTGGTGAAAAAGTAATACATGTTGTAGCAACCCCGTACTGATTATGAAGAATA < 1:783930/70‑1 ATATTGAACCGTTAATTGTGGTGAAAAAGTAATACATGTTGTAGCAACCCCGTACTGATTATGAAGAATA < 1:1387145/70‑1 ATATTGAACCGTTAATTGTGGTGAAAAAGTAATACATGTTGTAGCAACCCCGTACTGATTATGAAGAATA < 1:3202002/70‑1 TATTGAACCGTTAATTGTGGTGAAAAAGTAATACATGTTGTAGCAACCCCGTACTGATTATGAAGAATAAT < 1:3098941/71‑1 TTGAACCGTTAATTGTGGTGAAAAAGTAATACATGTTGTAGCAACCCCGTACTGATTATGAAGAATAATCA < 1:834844/71‑1 TTGAACCGTTAATTGTGGTGAAAAAGTAATACATGTTGTAGCAACCCCGTACTGATTATGAAGAATAATCA < 1:1153504/71‑1 TTGAACCGTTAATTGTGGTGAAAAAGTAATACATGTTGTAGCAACCCCGTACTGATTATGAAGAATAATCA < 1:3251071/71‑1 TTGAACCGTTAATTGTGGTGAAAAAGTAATACATGTTGTAGCAACCCCGTACTGATTATGAAGAATAATC < 1:72890/70‑1 CGTTAATTGTGGTGAAAAAGTAATACATGTTGTAGCAACCCCGTACTGATTATGAAGAATAATCAGTACGG > 1:1067548/1‑71 CGTTAATTGTGGTGAAAAAGTAATACATGTTGTAGCAACCCCGTACTGATTATGAAGAATAATCAGTACGG > 1:1892048/1‑71 CGTTAATTGTGGTGAAAAAGTAATACATGTTGTAGCAACCCCGTACTGATTATGAAGAATAATCAGTACGG > 1:1795858/1‑71 AATTGTGGTGAAAAAGTAATACATGTTGTAGCAACCCCGTACTGATTATGAAGAATA > 1:2847148/1‑57 TGTGGTGAAAAAGTAATACATGTTGTAGCAACCCCGTACTGATTATGAAGAATAATCAGTAC > 1:1039632/1‑62 AAAGTAATACATGTTGTAGCAACCCCGTACTGATTATGAAGAATAATCAGTACGG > 1:2116752/1‑55 AAAGTAATACATGTTGTAGCAACCCCGTACTGATTATGAAGAATAATCAGTACGG > 1:2732736/1‑55 AGTAATACATGTTGTAGCAACCCCGTACTGATTATGAAGAATAATCAGTACG > 1:1708761/1‑52 AGTAATACATGTTGTAGCAACCCCGTACTGATTATGAAGAATAATCAGTACG > 1:3505642/1‑52 TACATGTTGTAGCAACCCCGTACTGATTATGAAGAATAATC < 1:178635/41‑1 TACATGTTGTAGCAACCCCGTACTGATTATGAAGAATAATC < 1:3115793/41‑1 TACATGTTGTAGCAACCCCGTACTGATTATGAAGAATAATC < 1:2022187/41‑1 ATGTTGTAGCAACCCCGTACTGATTATGAAGAATAATCAGTACGGGG < 1:2309114/47‑1 TGTTGTAGCAACCCCGTACTGATTATGAAGAATAATCA > 1:2718976/1‑38 TGTTGTAGCAACCCCGTACTGATTATGAAGAATAATCA > 1:787843/1‑38 TGTTGTAGCAACCCCGTACTGATTATGAAGAATAATCA > 1:2000296/1‑38 TGTTGTAGCAACACCGTACTGATTATGAAGAATAATCA > 1:2083815/1‑38 GATTATGAAGAATAATCAGTACGGGGTTGCTACAACATGTATTACTTT > 1:1130000/1‑48 ATTATGAAGAATAATCAGTACGGGGTTGCTACAACATGT < 1:1937170/39‑1 ATTATGAAGAATAATCAGTACGGGGTTGCTACAACATGT < 1:2748362/39‑1 TTATGAAGAATAATCAGTACGGGGTTGCTACAACATGT < 1:3069590/38‑1 TATGAAGAATAATCAGTACGGGGTTGCTACAACATGTAT > 1:2940957/1‑39 TATGAAGAATAATCAGTACGGGGTTGCTACAACATGTAT > 1:1432659/1‑39 TATGAAGAATAATCAGTACGGGGTTGCTACAACATGTAT > 1:2480159/1‑39 ATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCACTCTCTT > 1:2845060/1‑71 AATCAGCACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCACTCTCTTT < 1:3717176/70‑1 ATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCACTCTCTTTT < 1:1703071/70‑1 TACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCACTCTCTTTTTTGATG < 1:381137/71‑1 CGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCACTCTCTTTTTTGAT > 1:3857/1‑68 GGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCACTCTCTTTTTTGATG < 1:2406908/68‑1 GGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGG < 1:3728813/42‑1 GGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCACTCTCTTTTTT < 1:3552847/62‑1 GGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCACTCTCTTTTTT < 1:2189024/62‑1 GTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCACTCTCTTTTTTGATGACCAGT > 1:3291511/1‑71 GTGATATTGAACCGTTAATTGTGGTGAAAAAGTAATACATGTTGTAGCAACCCCGTACTGATTATGAAGAATAATCAGTACGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1999457‑1999373‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ataatcagtacggggTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCACTCTCTTTTTTGATGACCAGT > Exported/1999408‑1999477 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |