New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | Exported | 2478469 = | 63 (1.070) | 3 (0.060) | 3/86 | NT | 6.1% | coding (442/774 nt) | pstB | phosphate transporter subunit |
? | Exported | 2478497 = | 40 (0.800) | coding (470/774 nt) | pstB | phosphate transporter subunit |
CCGGGCGAATGGCGATACCACGCGCAATACACAGACGCTGTTGCTGACCACCAGAGAGAGAGTAACCGCTCTGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2478544‑2478469 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctctggtgGTCAGCAACAGCGTCTGTGTATTGCGCGTGGTATCGCCATTCGCCCGGAAGTGCTGCTGCTCGAC > Exported/2478497‑2478561 CCGGGCGAATGGCGATACCACGCGCAATACACAGACGCTGTTGCTGACCACCAGAGAGAGAGTAACCGC < 1:3463230/69‑1 CGGGCGAATGGCGATACCACGCGCAATACACAGACGCTGTTGCTGACCACCAGAGAGAGAGTAACCGCTCT < 1:2207363/71‑1 GGGCGAATGGCGATACCACGCGCAATACACAGACGCTGTTGCTGACCACCAGAGAGAGAGTAACCGCTCTG < 1:3409009/71‑1 ATACCACGCGCAATACACAGACGCTGTTGCTGACCACCAGAGAGAGAGTAACCGCTCTG > 1:170915/1‑59 ATACCACGCGCAATACACAGACGCTGTTGCTGACCACCAGAGAGAGAGTAACCGCTCTG > 1:2319802/1‑59 CCAGAGAGAGAGTAACCGCTCTGGTGGTCAGCAACAGCGTCTGTGTATTGCGCGTGGTATCGCCATTCGCC > 1:3666610/1‑71 AGAGAGAGAGTAACCGCTCTGGTGGTCAGCAACAGCGTCTGTGTATTGCGCGTGGTATCGCCATTCGCCCG > 1:1472066/1‑71 GAGAGAGAGTAACCGCTCTGGTGGTCAGCAACAGCGTCTGTGTATTGCGCGTGGTATCGCCATTCGCCCGG < 1:1076686/71‑1 TGGTGGTCAGCAACAGCGTCTGTGTATTGCGCGTGGTATCGCCATTCGCCCGGAAGTGCTGCTGCTCGAC > 1:2131037/1‑70 CCGGGCGAATGGCGATACCACGCGCAATACACAGACGCTGTTGCTGACCACCAGAGAGAGAGTAACCGCTCTGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2478544‑2478469 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctctggtgGTCAGCAACAGCGTCTGTGTATTGCGCGTGGTATCGCCATTCGCCCGGAAGTGCTGCTGCTCGAC > Exported/2478497‑2478561 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |