| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 2970475 | 50 (0.850) | 5 (0.080) | 3/102 | NT | 10.2% | coding (605/645 nt) | ytjB | conserved hypothetical protein |
| ? | Exported | = 2970512 | 38 (0.640) | coding (568/645 nt) | ytjB | conserved hypothetical protein | |||||
ACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2970437‑2970475‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCTGGCAGCAATCGCCCTTCCTGTTAACCGCC < Exported/2970512‑2970480 ACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTCGCTGGCAGCAATCGCCCTTCCTGTTA > 1:1676039/1‑66ACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTCGCTGGCAGCAATCGCCCTTCCTGTTA > 1:3602401/1‑66 TCTCGCTTTCTTCCTCTTCCGGCACCGGTTCGCTGGCAGCAATCGCCCTTCCTGTTAACCG < 1:738836/61‑1 TCGCTTTCTTCCTCTTCCGGCACCGGTTCGCTGGCAGCAATCGCCCTTCCTGTTAACCGCC > 1:1084879/1‑61 TCGCTTTCTTCCTCTTCCGGCACCGGTTCGCTGGCAGCAATCGCCCTTCCTGTTAACCGCC > 1:1543517/1‑61 ACTCTTTTTTCTCGCTTTCTTCCTCTTCCGGCACCGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2970437‑2970475‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCTGGCAGCAATCGCCCTTCCTGTTAACCGCC < Exported/2970512‑2970480 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |