| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 2970475 | 50 (0.850) | 5 (0.080) | 3/102 | NT | 10.2% | coding (605/645 nt) | ytjB | conserved hypothetical protein |
| ? | Exported | = 2970512 | 38 (0.640) | coding (568/645 nt) | ytjB | conserved hypothetical protein | |||||
TTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACACCGATTGCCAGTGAGAGCAGCAACATCAG > Exported/2970444‑2970581 | tttCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCgg < 1:972160/70‑1 (MQ=255) ttCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGt > 1:484041/1‑71 (MQ=255) gCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGc < 1:3376375/68‑1 (MQ=255) gCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCg < 1:1145632/69‑1 (MQ=255) cTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGtt > 1:1401899/1‑70 (MQ=255) tcttcctcttccGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTg > 1:3578920/1‑63 (MQ=255) tcttcctcttccGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTg > 1:427372/1‑63 (MQ=255) tcttcctcttccGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTa < 1:2180954/69‑1 (MQ=255) tcttcctcttccGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTa < 1:1702232/69‑1 (MQ=255) tcttcctcttccGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTa < 1:3610178/69‑1 (MQ=255) cttcctcttccGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTAcc < 1:150384/70‑1 (MQ=255) ttccGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTag > 1:1389996/1‑69 (MQ=255) gCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTg < 1:1236913/71‑1 (MQ=255) gCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTg > 1:199138/1‑71 (MQ=255) cACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGc < 1:1489455/71‑1 (MQ=255) cACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGc > 1:3457930/1‑71 (MQ=255) cACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGc > 1:2271248/1‑71 (MQ=255) ccGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCgg < 1:2042779/71‑1 (MQ=255) cGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCggg > 1:1246465/1‑71 (MQ=255) ggTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGt < 1:3310003/71‑1 (MQ=255) gTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTa < 1:3298444/57‑1 (MQ=255) tGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAg > 1:779503/1‑70 (MQ=255) ggCGGTTAACAGGAAGGGCGATTGCTGCCAGCGaaccggtgccggaagaggaagaaagcga > 1:1084879‑M2/1‑33 (MQ=255) ggCGGTTAACAGGAAGGGCGATTGCTGCCAGCGaaccggtgccggaagaggaagaaagcga > 1:1543517‑M2/1‑33 (MQ=255) ggCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTagcagc > 1:2614562/1‑55 (MQ=255) ggCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTagcagc > 1:2015435/1‑55 (MQ=255) gCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTa > 1:2735183/1‑70 (MQ=255) cGGTTAACAGGAAGGGCGATTGCTGCCAGCGaaccggtgccggaagaggaagaaagcgaga < 1:738836‑M2/61‑31 (MQ=255) tAACAGGAAGGGCGATTGCTGCCAGCGaaccggtgccggaagaggaagaaagcgagaaaaaagagt > 1:1676039‑M2/1‑27 (MQ=255) tAACAGGAAGGGCGATTGCTGCCAGCGaaccggtgccggaagaggaagaaagcgagaaaaaagagt > 1:3602401‑M2/1‑27 (MQ=255) aaCAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACACCGAt > 1:2619210/1‑71 (MQ=255) cAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACACCGATTg > 1:3273578/1‑71 (MQ=255) cAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACACCGATTg > 1:1698340/1‑71 (MQ=255) aGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACACCGATTGc > 1:2448931/1‑71 (MQ=255) ggAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACACCGATTGc > 1:369827/1‑70 (MQ=255) gAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACACCGATTGc > 1:3470006/1‑69 (MQ=255) gAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACACCGATTGCCa < 1:366438/71‑1 (MQ=255) gggCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACACCGATTGCCAGt > 1:364476/1‑70 (MQ=255) ggCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACACCGATTGCCAGt > 1:1355611/1‑69 (MQ=255) ggCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACACCGATTGCCAGt > 1:1790163/1‑69 (MQ=255) cGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAg > 1:1591585/1‑48 (MQ=255) cGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACACCGATTGCCAGTga > 1:298885/1‑69 (MQ=255) ttGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACACCGATTGCCAGTGagag > 1:19656/1‑69 (MQ=255) ttGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACACCGATTGCCAGTGagag > 1:2442175/1‑69 (MQ=255) ttGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACACCGATTGCCAGTGagag > 1:2446495/1‑69 (MQ=255) tgctgcCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACACCGATTGCCAGTGAGagcag > 1:3504846/1‑71 (MQ=255) tgctgcCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACACCGATTGCCAGTGAGagcag > 1:2506937/1‑71 (MQ=255) ctgcCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACACCGATTGCCAGTGAGagcagc < 1:2260705/70‑1 (MQ=255) gCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTa > 1:447115/1‑41 (MQ=255) cGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACACCGATTGCCAGTGAGAGCAGCAACATCAg < 1:3654348/71‑1 (MQ=255) | TTTCTCGCTTTCTTCCTCTTCCGGCACCGGTTTGCTGGCGGTTAACAGGAAGGGCGATTGCTGCCAGCGGGTGCGTTTACCCTGTAGCAGCGTGCGGGTCAGCACTACACCGATTGCCAGTGAGAGCAGCAACATCAG > Exported/2970444‑2970581 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |