New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Exported = 284498062 (1.050)4 (0.070) 3/96 NT 6.3% coding (676/978 nt) poxA predicted lysyl‑tRNA synthetase
?Exported = 2845032 61 (1.100)coding (728/978 nt) poxA predicted lysyl‑tRNA synthetase

AAATATTGGCAAAGAAAAACCGACCTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAGGTTTATTATAAAGGTATTGAGCTGGCGAATGGTT  >  Exported/2844910‑2845049
                                                                      |                                                                     
aaaTATTGGCAAAGAAAAACCGACCTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCA                                                                       <  1:1326817‑M1/71‑1 (MQ=255)
aaaTATTGGCAAAGAAAAACCGACCTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCA                                                                       <  1:2996446‑M1/71‑1 (MQ=255)
  atatTGGCAAAGAAAAACCGACCTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAg                                                                      >  1:2771888/1‑70 (MQ=255)
  atatTGGCAAAGAAAAACCGACCTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAg                                                                      >  1:876153/1‑70 (MQ=255)
  atatTGGCAAAGAAAAACCGACCTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAg                                                                      >  1:1509482/1‑70 (MQ=255)
  atatTGGCAAAGAAAAACCGACCTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAg                                                                      >  1:2353550/1‑70 (MQ=255)
   tatTGGCAAAGAAAAACCGACCTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGt                                                                     <  1:2982791/70‑1 (MQ=255)
          aaaGAAAAACCGACCTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGa                                                                <  1:3461476/68‑1 (MQ=255)
           aaGAAAAACCGACCTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGaa                                                               <  1:3553605/68‑1 (MQ=255)
            aGAAAAACCGACCTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGat                                                            >  1:1369703/1‑70 (MQ=255)
             gAAAAACCGACCTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGaa                                                               >  1:1698252/1‑66 (MQ=255)
               aaaaCCGACCTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGatcatc                                                        >  1:398401/1‑71 (MQ=255)
               aaaaCCGACCTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGatcat                                                         <  1:2786605/70‑1 (MQ=255)
                aaaCCGACCTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCg                                                       >  1:2191138/1‑71 (MQ=255)
                aaaCCGACCTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCg                                                       <  1:1294523/71‑1 (MQ=255)
                  aCCGACCTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCggg                                                     >  1:3627507/1‑71 (MQ=255)
                  aCCGACCTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCggg                                                     >  1:806272/1‑71 (MQ=255)
                   ccGACCTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGt                                                    <  1:1069629/71‑1 (MQ=255)
                    cGACCTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGt                                                    >  1:2268857/1‑70 (MQ=255)
                    cGACCTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTc                                                   >  1:1255792/1‑71 (MQ=255)
                      aCCTTTGTGTACGACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGc                                                 <  1:945156/71‑1 (MQ=255)
                      aCCTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGc                                                 <  1:391360/71‑1 (MQ=255)
                       ccTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCt                                                <  1:3124606/71‑1 (MQ=255)
                         tttGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCg                                                                 <  1:650776/52‑1 (MQ=255)
                         tttGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCg                                                                 <  1:553256/52‑1 (MQ=255)
                         tttGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCg                                                                 <  1:1793160/52‑1 (MQ=255)
                           tgtgTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGaa                                             <  1:2143372/70‑1 (MQ=255)
                           tgtgTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGaa                                             <  1:2162547/70‑1 (MQ=255)
                           tgtgTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAAc                                            >  1:767972/1‑71 (MQ=255)
                               tACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAatacctttataataaacctcaaagcgttcag                                        >  1:60989‑M1/1‑40 (MQ=255)
                               tACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCtt                                        <  1:48085/71‑1 (MQ=255)
                               tACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCt                                         <  1:3460292/70‑1 (MQ=255)
                                aCCACTTTCCAGCCAGCCAGGCATCACTGGCTCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCtt                                        >  1:99478/1‑70 (MQ=255)
                                 ccACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCttt                                       >  1:1432275/1‑70 (MQ=255)
                                    cTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGaa                                             >  1:2637625/1‑61 (MQ=255)
                                    cTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAgg                                   >  1:3057186/1‑71 (MQ=255)
                                    cTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAgg                                   >  1:3415353/1‑71 (MQ=255)
                                    cTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAgg                                   >  1:1012897/1‑71 (MQ=255)
                                     tttCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGatca                                                          <  1:1393572/47‑1 (MQ=255)
                                     tttCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGaa                                             >  1:26752/1‑60 (MQ=255)
                                     tttCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGaa                                             >  1:1377755/1‑60 (MQ=255)
                                       tCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCtt                                        >  1:1700489/1‑63 (MQ=255)
                                       tCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAGGtt                                 >  1:3543180/1‑70 (MQ=255)
                                       tCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAGGtt                                 >  1:653153/1‑70 (MQ=255)
                                         cagccagccagGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCtt                                        >  1:2474126/1‑61 (MQ=255)
                                         cagccagccagGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCtt                                        >  1:1391118/1‑61 (MQ=255)
                                         cagccagccagGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCtt                                        >  1:3472463/1‑61 (MQ=255)
                                         cagccagccagGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCtt                                        >  1:1113722/1‑61 (MQ=255)
                                          agccagccagGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCttt                                       <  1:1827761/61‑1 (MQ=255)
                                          agccagccagGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCttt                                       <  1:1146621/61‑1 (MQ=255)
                                          agccagccagGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAGGTttat                              >  1:1030858/1‑70 (MQ=255)
                                           gccagccagGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGt                                                    <  1:2721247/47‑1 (MQ=255)
                                           gccagccagGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGt                                                    <  1:712183/47‑1 (MQ=255)
                                           gccagccagGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGt                                                    <  1:615218/47‑1 (MQ=255)
                                           gccagccagGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGt                                                    <  1:1615673/47‑1 (MQ=255)
                                            ccagccagGCATCACTGGCGCAAATCAGTACCGAAGATCATCg                                                       <  1:109349/43‑1 (MQ=255)
                                            ccagccagGCATCACTGGCGCAAATCAGTACCGAAGATCATCg                                                       <  1:2695028/43‑1 (MQ=255)
                                            ccagccagGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAGGttt                                >  1:3367627/1‑66 (MQ=255)
                                             cagccagGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAGGTttatta                            >  1:2937229/1‑69 (MQ=255)
                                             cagccagGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAGGTTtattat                           >  1:1332853/1‑70 (MQ=255)
                                             cagccagGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAGGGttatta                            >  1:628497/1‑69 (MQ=255)
                                                 cagGCATCACTGGCGCAAATCAatacctttataataaacctcaaagcgttcagcgacccgatgatcttc                        <  1:1618580‑M1/69‑48 (MQ=255)
                                                   ggCATCACTGGCGCAAATCAatacctttataataaacctcaaagcgttcagcgacccgatgatcttcgg                      >  1:1434462‑M1/1‑20 (MQ=255)
                                                   ggCATCACTGGCGCAAATCAatacctttataataaacctcaaagcgttcagcgacccgatgatcttcgg                      >  1:891189‑M1/1‑20 (MQ=255)
                                                    gCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGa                                              >  1:1413482/1‑44 (MQ=255)
                                                    gCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGa                                              >  1:690411/1‑44 (MQ=255)
                                                       tCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAGGTTTATTATAAAGGTATtg                 >  1:3588383‑M2/1‑68 (MQ=255)
                                                        cACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAGGTTTATTATAAAGGTATTGAg               >  1:40148/1‑71 (MQ=255)
                                                             gcgcAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAGGTTTATTATAAAGGTa                    >  1:451110/1‑61 (MQ=255)
                                                             gcgcAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAGGTTTATTATAAAGGTATTGAGCTg            <  1:599333/69‑1 (MQ=255)
                                                             gcgcAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAGGTTTATTATAAAGGTATTGAGCTg            <  1:1182952/69‑1 (MQ=255)
                                                              cgcAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAGGTTTATTATAAAGGTATTGAGCTGGCg         <  1:2425502/71‑1 (MQ=255)
                                                              cgcAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAGGTTTATTATAAAGGTATTGAGCTGGCg         <  1:1110731/71‑1 (MQ=255)
                                                                 aaaTCAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAGGTTTATTATAAAGGTATTGAGCTGGCGAAt      >  1:1182228/1‑71 (MQ=255)
                                                                  aaTCAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAGGTTTATTATAAAGGTATTGAGCTGGCGAATg     >  1:987678/1‑71 (MQ=255)
                                                                  aaTCAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAGGTTTATTATAAAGGTATTGAGCTGGCGAATg     <  1:3260072/71‑1 (MQ=255)
                                                                     cAatacctttataataaacctcaaagcgttcagcgacccgatgatcttcggtactgatttgcgccagtga   >  1:3588383‑M1/1‑2 (MQ=255)
                                                                     cAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAGGTTTATTATAAAGGTATTGAGCTGGCGAATGGtt  >  1:2375773/1‑71 (MQ=255)
                                                                     cAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAGGTTTATTATAAAGGTATTGAGCTGGCGAATGGtt  >  1:1415781/1‑71 (MQ=255)
                                                                      |                                                                     
AAATATTGGCAAAGAAAAACCGACCTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAGGTTTATTATAAAGGTATTGAGCTGGCGAATGGTT  >  Exported/2844910‑2845049

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.