| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 1163606 = | 45 (0.760) | 5 (0.090) | 3/94 | NT | 10.9% | coding (401/549 nt) | ynjA | conserved hypothetical protein |
| ? | Exported | 1163628 = | 40 (0.740) | coding (423/549 nt) | ynjA | conserved hypothetical protein | |||||
GTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTT > Exported/1163559‑1163694 | gTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCAtt > 1:2157184/1‑71 (MQ=255) caggccgatcaatgccgtcagttcggtgagcgcctgagcgtcaaaaTGCGTACCCGACTGGCTGCGCAt > 1:527120‑M1/47‑69 (MQ=255) ggccgatcaatgccgtcagttcggtgagcgcctgagcgtcaaaaTGCGTACCCGACTGGCTGCGCAttt < 1:2459406‑M1/25‑1 (MQ=255) ggccgatcaatgccgtcagttcggtgagcgcctgagcgtcaaaaTGCGTACCCGACTGGCTGCGCAtt < 1:2606090‑M1/24‑1 (MQ=255) cGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCAtttt > 1:1246084/1‑70 (MQ=255) cGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTg < 1:1956802/71‑1 (MQ=255) cGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTg < 1:2175288/71‑1 (MQ=255) cGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGAc > 1:2959665/1‑70 (MQ=255) cGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACg > 1:1445151/1‑71 (MQ=255) gAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGAc > 1:3424095/1‑69 (MQ=255) gAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGc > 1:2702604/1‑71 (MQ=255) aaGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGgcgc > 1:3307304/1‑71 (MQ=255) gCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGgcgcg > 1:676581/1‑69 (MQ=255) gCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCt > 1:2714034/1‑70 (MQ=255) gCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCt > 1:2370527/1‑70 (MQ=255) cagttcggtgagcgcctgagcgtcaaaaTGCGTACCCGACTGGCTGCGCAtt < 1:2319545‑M1/24‑1 (MQ=255) cagttcggtgagcgcctgagcgtcaaaaTGCGTACCCGACTGGCTGCGCAtt < 1:2548689‑M1/24‑1 (MQ=255) aCGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCg < 1:1276369/70‑1 (MQ=255) aCGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCg < 1:2337322/70‑1 (MQ=255) aCGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCg > 1:3440105/1‑70 (MQ=255) cgccgcCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGaa < 1:2875238/71‑1 (MQ=255) ccgccAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAgg < 1:2630182/58‑1 (MQ=255) cgccAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGgcgc < 1:1968008/60‑1 (MQ=255) cgccAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGgcgc < 1:1470387/60‑1 (MQ=255) cgccAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGgcgc < 1:2388223/60‑1 (MQ=255) gccAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCAtt < 1:2829566/44‑1 (MQ=255) gccAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGa > 1:3300243/1‑71 (MQ=255) cAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACg > 1:3573101/1‑71 (MQ=255) aCGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGc < 1:2426108/71‑1 (MQ=255) cGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCa < 1:1550234/71‑1 (MQ=255) tCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGTCGCTCACCGAACTGACGGCATTg < 1:2811424/71‑1 (MQ=255) tCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTg < 1:3026668/71‑1 (MQ=255) tCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTg < 1:2498570/71‑1 (MQ=255) tCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTg < 1:1736714/71‑1 (MQ=255) atgatgCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGa < 1:3216262/69‑1 (MQ=255) tgatgCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGc < 1:982339/63‑1 (MQ=255) tgatgCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCg > 1:2633901/1‑71 (MQ=255) atgCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGc < 1:494718/71‑1 (MQ=255) cccTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTg < 1:839381/71‑1 (MQ=255) aaatgcgcagccagtcgggtacgcaTTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGcc < 1:2459406‑M2/44‑1 (MQ=255) aatgcgcagccagtcgggtacgcaTTTTGACGCTCAGGCGCTCACCGAACTg < 1:2319545‑M2/28‑1 (MQ=255) aatgcgcagccagtcgggtacgcaTTTTGACGCTCAGGCGCTCACCGAACTg < 1:2548689‑M2/28‑1 (MQ=255) aatgcgcagccagtcgggtacgcaTTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGcc < 1:2606090‑M2/44‑1 (MQ=255) atgcgcagccagtcgggtacgcaTTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTg > 1:527120‑M2/24‑69 (MQ=255) CGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCaaaa > 1:1608026‑M1/1‑71 (MQ=255) tACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGTCCTGCAAAATc < 1:3308874/71‑1 (MQ=255) tACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGTCCTGCAAAATc < 1:3313252/71‑1 (MQ=255) ccGACTGTCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTg < 1:1698658/52‑1 (MQ=255) ccGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGa > 1:2678731/1‑53 (MQ=255) ccGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGt < 1:2996821/71‑1 (MQ=255) ccGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGt < 1:1953455/71‑1 (MQ=255) cGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCt < 1:3407891/68‑1 (MQ=255) cTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGc > 1:2449565/1‑71 (MQ=255) cTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGc > 1:2845266/1‑71 (MQ=255) tGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCg < 1:3514203/51‑1 (MQ=255) tGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGc < 1:135716/53‑1 (MQ=255) gCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCg < 1:2819824/71‑1 (MQ=255) gCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCg < 1:143495/71‑1 (MQ=255) cagcgcATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCa < 1:3299641/53‑1 (MQ=255) cTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGt < 1:358515/71‑1 (MQ=255) cTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGt < 1:1164890/71‑1 (MQ=255) gcaTTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGtttt > 1:409150‑M2/4‑70 (MQ=255) caTTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCt < 1:2441447‑M2/54‑1 (MQ=255) caTTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCt < 1:2856240‑M2/54‑1 (MQ=255) | GTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTT > Exported/1163559‑1163694 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |