| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 318236 | 70 (1.240) | 4 (0.080) | 3/92 | NT | 5.4% | coding (990/1326 nt) | ykgC | predicted oxidoreductase with FAD/NAD(P)‑binding domain and dimerization domain |
| ? | AP009048 | = 318248 | 78 (1.540) | coding (978/1326 nt) | ykgC | predicted oxidoreductase with FAD/NAD(P)‑binding domain and dimerization domain | |||||
ATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/318162‑318236‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggaaAAATGTGCCTTATTCCGTATTTATGACACCGCCCCTGTCCAGGGTTGGTATGACAGAAGAACAAGCCAGA < AP009048/318248‑318179 aaATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATAC < 1:1397233/69‑1ATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATAC > 1:2153606/1‑71 TATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACG < 1:2459353/71‑1 AGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAA < 1:740847/70‑1 AGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAA < 1:5161657/70‑1 ACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACG > 1:5040803/1‑61 TCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATAC > 1:3206670/1‑56 CTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGG < 1:3265721/57‑1 TCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGA < 1:2425404/57‑1 CTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAA > 1:703648/1‑57 CTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAAAAATGTGCCTTATTCCGTA > 1:4528963/1‑66 CTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAAAAATGTGCCTTATTCCGTA > 1:2233273/1‑66 TGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAAAAATGTGCCTTA > 1:1944315/1‑55 TGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGG < 1:4116668/41‑1 CTGGACAGGGGCGGTGTCATAAATACGGAAAAATGTGCCTTAT < 1:5028985/43‑1 CGGAAAAATGTGCCTTATTCCGTATTTATGACACCGCCCCTGTCCAGGGTTGGTATGACAGAAGAA > 1:391692/1‑66 CGGAAAAATGTGCCTTATTCCGTATTTATGACACCGCCCCTGTCCA > 1:2763232/1‑46 GGAAAAATGTGCCTTATTCCGTATTTATGACACCGCCCCTGTCCAGGGTTGGTATGACAGAAGAACAAGC < 1:3955085/70‑1 GGAAAAATGTGCCTTATTCCGTATTTATGACACCGCCCCTGTCCAGGGTTGGTATGACAGAA < 1:1254635/62‑1 AAAAATGTGCCTTATTCCGTATTTATGACACCGCCCCTGTCCAGGGTTGGTATGACAGAAGAACAAGCCAG < 1:791126/71‑1 AAAAATGTGCCTTATTCCGTATTTATGACACCGCCCCTGTCCAGGGTTGGTATGACAGAAGAACAAGC > 1:3837595/1‑68 AAAAATGTGCCTTATTCCGTATTTATGACACCGCC < 1:3587372/35‑1 AAAATGTGCCTTATTCCTTATTTATGACACCGCCCCTGTCCAGGGTTGGTATGACAGAAGAACAAGCCA > 1:1431773/1‑69 AAAATGTGCCTTATTCCGTATTTATGACACCGCCCCTGTCCAGGGTTGGTATGACAGAAGAACAAGCCAGA < 1:2878238/71‑1 AAAATGTGCCTTATTCCGTATTTATGACACCGCCCCTGTCCAGGGTTGGTATGACAGAAGAACAAGCCA > 1:2747597/1‑69 AAAATGTGCCTTATTCCGTATTTATGACACCGCCCCTGTCCAGGGTTGGTATGACAGAAGAACAAGCCA > 1:1282624/1‑69 AAAATGTGCCTTATTCCGTATTTATGACACCGCCCCTGTC < 1:2859406/40‑1 ATATCAGCACCACTCTCTCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/318162‑318236‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggaaAAATGTGCCTTATTCCGTATTTATGACACCGCCCCTGTCCAGGGTTGGTATGACAGAAGAACAAGCCAGA < AP009048/318248‑318179 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |