| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 318236 | 70 (1.240) | 4 (0.080) | 3/92 | NT | 5.4% | coding (990/1326 nt) | ykgC | predicted oxidoreductase with FAD/NAD(P)‑binding domain and dimerization domain |
| ? | AP009048 | = 318248 | 78 (1.540) | coding (978/1326 nt) | ykgC | predicted oxidoreductase with FAD/NAD(P)‑binding domain and dimerization domain | |||||
Only 100 of 117 total aligned reads displayed.
TCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGT > AP009048/318179‑318317 | tctGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTt < 1:2878238‑M2/71‑2 (MQ=255) ctGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTtt < 1:791126‑M2/71‑3 (MQ=255) tGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACAttt < 1:1024207/68‑1 (MQ=255) tGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTt > 1:2747597‑M2/1‑68 (MQ=255) tGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTt > 1:1282624‑M2/1‑68 (MQ=255) tGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATAAGGAATAAGGCACATTTt > 1:1431773‑M2/1‑68 (MQ=255) gCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTttcc < 1:3955085‑M2/70‑5 (MQ=255) gCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTtt > 1:3837595‑M2/1‑66 (MQ=255) tGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGat > 1:707285/1‑70 (MQ=255) tGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGat > 1:4776088/1‑70 (MQ=255) gTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGatc < 1:696275/70‑1 (MQ=255) ttcttcTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTttccg > 1:391692‑M2/1‑61 (MQ=255) ttctGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTttcc < 1:1254635‑M2/62‑5 (MQ=255) ttctGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAg > 1:4304086/1‑71 (MQ=255) tctGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGAtcatca > 1:326411/1‑69 (MQ=255) cATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGatcatc > 1:3337546/1‑63 (MQ=255) cATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGtactac > 1:1002802/1‑71 (MQ=255) aTACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACg > 1:2463590/1‑71 (MQ=255) tACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGatca < 1:2204634/59‑1 (MQ=255) aCCAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGatcat > 1:4420532/1‑59 (MQ=255) cAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGatcatct < 1:4092949/59‑2 (MQ=255) cAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAg < 1:1204691/60‑1 (MQ=255) cAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTg < 1:2560238/71‑1 (MQ=255) cAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTg > 1:3050617/1‑71 (MQ=255) aCCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGcc > 1:4364534/1‑71 (MQ=255) aCCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGcc < 1:4948664/71‑1 (MQ=255) cccTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGta < 1:1855106/59‑1 (MQ=255) cccTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGc > 1:1380428/1‑69 (MQ=255) cccTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCt < 1:1893445/71‑1 (MQ=255) cccTGCACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCt < 1:1617342/71‑1 (MQ=255) ccTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGcc > 1:3936857/1‑69 (MQ=255) ccTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCtt < 1:2949104/71‑1 (MQ=255) tGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTttccg > 1:2763232‑M2/1‑41 (MQ=255) tGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGatcat > 1:3765493/1‑51 (MQ=255) tGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGat > 1:2839778/1‑48 (MQ=255) ggACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGta > 1:1677341/1‑55 (MQ=255) gACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTt < 1:2859406‑M2/40‑2 (MQ=255) gACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGat > 1:4930843/1‑46 (MQ=255) cAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCAcc > 1:2253109/1‑69 (MQ=255) aGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTACCGATCATCAGTACTACGTTTGCCtt > 1:1997654/1‑64 (MQ=255) ggggCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCAcc > 1:2625838/1‑67 (MQ=255) gggCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGt < 1:573912/70‑1 (MQ=255) gggCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTa < 1:264936/71‑1 (MQ=255) gggCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTa < 1:4320949/71‑1 (MQ=255) ggCGGTGTCATAAATACGGAATAAGGCACATTTtt < 1:3587372‑M2/35‑3 (MQ=255) gCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAAc < 1:2716280/71‑1 (MQ=255) cGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAg < 1:2776130/44‑1 (MQ=255) gtgtCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACtca > 1:2473834/1‑71 (MQ=255) tCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCt < 1:2956407/53‑1 (MQ=255) tCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCa < 1:2398224/56‑1 (MQ=255) aTAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTc > 1:3016080/1‑53 (MQ=255) aTAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACg > 1:3939252/1‑71 (MQ=255) aTAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACg < 1:1648489/71‑1 (MQ=255) aTAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACg < 1:3313153/71‑1 (MQ=255) aTAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACg > 1:4802386/1‑71 (MQ=255) aTAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACg > 1:4591202/1‑71 (MQ=255) tAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAAc > 1:3348822/1‑62 (MQ=255) aaaTACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCa > 1:4201066/1‑52 (MQ=255) aaaTACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTaa > 1:5116327/1‑60 (MQ=255) aaaTACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTa > 1:2271440/1‑71 (MQ=255) aaTACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTa > 1:3750552/1‑70 (MQ=255) aaTACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTa > 1:4312179/1‑70 (MQ=255) aTACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACtcat > 1:3123846/1‑63 (MQ=255) tACGGAATAAGGCACATTTttccgtatttatgacaccgcccctgtccagggttggtatgacagaag > 1:2233273‑M2/1‑19 (MQ=255) tACGGAATAAGGCACATTTttccgtatttatgacaccgcccctgtccagggttggtatgacagaag > 1:4528963‑M2/1‑19 (MQ=255) tACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACaa > 1:4397805/1‑71 (MQ=255) tACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACaa < 1:2394110/71‑1 (MQ=255) aCGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTaa > 1:2084980/1‑56 (MQ=255) cGGAATAAGGCACATTTTTCCGATCATCAGtacta > 1:3997610/1‑35 (MQ=255) cGGAATAAGGCACATTTTTCCGATCATCAGtacta > 1:5041423/1‑35 (MQ=255) cGGAATAAGGCACATTTTTCCGATCATCAGtacta > 1:280791/1‑35 (MQ=255) ggAATAAGGCACATTTTTCCGATCATCAGTACTACGt < 1:2790858/37‑1 (MQ=255) ggAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAAt > 1:3810624/1‑69 (MQ=255) gAATAAGGCACATTTTTCCGATCATCAGTACTACGttt > 1:4730745/1‑38 (MQ=255) gAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCAcc < 1:2075547/47‑1 (MQ=255) gAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACtcatca > 1:170297/1‑60 (MQ=255) aTAAGGCACATTTttccgtatttatgacaccgcccctgtccag < 1:5028985‑M2/43‑31 (MQ=255) aTAAGGCACATTTTTCCGATCATCAGTACTACGttt > 1:2290551/1‑36 (MQ=255) aTAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCgg > 1:2992034/1‑70 (MQ=255) tAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGt < 1:2502853/70‑1 (MQ=255) tAACGCACATTTTTCCGATCATCAGTACTACGTTTGCCt < 1:1936804/39‑1 (MQ=255) aaGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGt > 1:2247475/1‑69 (MQ=255) aGGCACATTTTTCCGATCATCAGTACTACGTTTGc > 1:2017226/1‑35 (MQ=255) aGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAat < 1:4444013/71‑1 (MQ=255) aGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAat > 1:3413822/1‑71 (MQ=255) gCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAatca < 1:5180201/71‑1 (MQ=255) cacaTTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAatc > 1:1233275/1‑69 (MQ=255) cacaTTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAatc > 1:1475482/1‑69 (MQ=255) acaTTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACg < 1:830377/53‑1 (MQ=255) acaTTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACg < 1:4701520/53‑1 (MQ=255) caTTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACtcat > 1:1189288/1‑48 (MQ=255) caTTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATcc < 1:3621479/71‑1 (MQ=255) aTTTTTCCGATCATCAGTACTACGTTTGCCTTCACCGAGTAACTCATCACGTACAATGCGGt < 1:5167225/62‑1 (MQ=255) aTTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGAGGTAatcatc > 1:1855238/1‑69 (MQ=255) ttttCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAg > 1:2970191/1‑70 (MQ=255) ttttCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGt > 1:47218/1‑71 (MQ=255) ttttCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGt > 1:2846768/1‑71 (MQ=255) tttCCGATCATCAGTACTACGTTTGCCTTCACCCAGTaa > 1:346599/1‑39 (MQ=255) tttCCGATCATCAGTACTACGTTTGCCTTCACCCAGTTACTGATCACGTACAATGCGGTAATCATCCAGt < 1:794660/70‑1 (MQ=255) tttCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACg < 1:4240323/48‑1 (MQ=255) | TCTGGCTTGTTCTTCTGTCATACCAACCCTGGACAGGGGCGGTGTCATAAATACGGAATAAGGCACATTTTTCCGATCATCAGTACTACGTTTGCCTTCACCCAGTAACTCATCACGTACAATGCGGTAATCATCCAGT > AP009048/318179‑318317 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |