| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 2044974 = | 48 (0.850) | 3 (0.060) | 3/90 | NT | 6.9% | coding (470/531 nt) | yodB | predicted cytochrome |
| ? | AP009048 | 2044999 = | 38 (0.770) | coding (495/531 nt) | yodB | predicted cytochrome | |||||
TAAGGGGATCGACTTATTTGCGGCGAGGCATCATTCGTAACAGAGTATTATCTTTCTGAATGTAGTGATGAAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/2045048‑2044974‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaagaTAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATCCCCTTACAAGGAAATGTGAACCA > AP009048/2044999‑2045065 TAAGGGGATCGACTTATTTGCGGCGAGGCATCATTCGTAACAGAGTATTATCTTTCTGAATGTAGTGATGA < 1:690548/71‑1 AGGGGATCGACTTATTTGCGGCGAGGCATCATTCGTAACAGAGTATTATCTTTCTGAATGTAGTGATGA > 1:4640138/1‑69 ACTTATTTGCGGCGAGGCATCATTCGTAACAGAGTATTATCTTTCTGAATGTAGTGATGA < 1:4768037/60‑1 TTTGCGGCGAGGCATCATTCGTAACAGAGTATTATCTTTCTGAATGTAGTGATGAAAGA > 1:2551580/1‑59 TTGCGGCGAGGCATCATTCGTAACAGAGTATTATCTTTCTGAATGTAGTGATG < 1:5001089/53‑1 GGCGAGGCATCATTCGTAACAGAGTATTATCTTTCTGAATGTAGTGATGAAAG < 1:4756367/53‑1 CGAGGCATCATTCGTAACAGAGTATTATCTTTCTGAATGTAGTGATGAAA > 1:2576475/1‑50 TCATTCGTAACAGAGTATTATCTTTCTGAATGTAGTGATG < 1:1717133/40‑1 TTCGTAACAGAGTATTATCTTTCTGAATGTAGTGATG < 1:4558322/37‑1 ACAGAGTATTATCTTTCTGAATGTAGTGATGAAAGA > 1:4791446/1‑36 TCTTTCTGAATGTAGTGATGAAAGATAATACTCTGTTACGAATGATGCC < 1:3128555/49‑1 TTTCTGAATGTAGTGATGAAAGATAATACTCTGTTACGAATGATGCCTC > 1:3672999/1‑49 TGAATGTAGTGATGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATC > 1:1071637/1‑63 GAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGAT > 1:187664/1‑49 AAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATCCCCTTACAAGGAAATGTGAAC > 1:2569464/1‑70 AAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTC > 1:629548/1‑45 AAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATCCCCTTACAAGGAAATGTGAACCA > 1:599902/1‑71 AAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAA > 1:2410473/1‑38 AAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAA > 1:1557143/1‑38 TAAGGGGATCGACTTATTTGCGGCGAGGCATCATTCGTAACAGAGTATTATCTTTCTGAATGTAGTGATGAAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/2045048‑2044974‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaagaTAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATCCCCTTACAAGGAAATGTGAACCA > AP009048/2044999‑2045065 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |