| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 2044974 = | 48 (0.850) | 3 (0.060) | 3/90 | NT | 6.9% | coding (470/531 nt) | yodB | predicted cytochrome |
| ? | AP009048 | 2044999 = | 38 (0.770) | coding (495/531 nt) | yodB | predicted cytochrome | |||||
AAAAATATTCACGAAACCTGGGCAAATATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATC > AP009048/2044907‑2045042 | tggttcacatttccttgtaaggggatcgacttatttgcggcgaggcatcattcgtaacagagtattaTCtt > 1:599902‑M1/68‑71 (MQ=255)aaaaaTATTCACGAAACCTGGGCAAATATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCActct < 1:1574703/70‑1 (MQ=255) aaaaTATTCACGAAACCTGGGCAAATATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCttt < 1:3945909/71‑1 (MQ=255) gttcacatttccttgtaaggggatcgacttatttgcggcgaggcatcattcgtaacagagtattaTCttt > 1:2569464‑M1/66‑70 (MQ=255) aaaTATTCACGAAACCTGGGCAAATATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCttt > 1:4923625/1‑70 (MQ=255) aaTATTCACGAAACCTGGGCAAATATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTtca > 1:2151193/1‑71 (MQ=255) aaTATTCACGAAACCTGGGCAAATATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTtca > 1:155778/1‑71 (MQ=255) ttCACGAAACCTGGGCAAATATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTtcatca < 1:1591854/70‑1 (MQ=255) aCGAAACCTGGGCAAATATAGGCTACTTTTTAATCGCAGCTCACTCTGGCGCAGCACTCTTTCATCACTa < 1:1417589/70‑1 (MQ=255) aCGAAACCTGGGCAAATATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTa < 1:1355387/70‑1 (MQ=255) gAAACCTGGGCAAATATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACAt > 1:2353805/1‑71 (MQ=255) gAAACCTGGGCAAATATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACAt > 1:1475035/1‑71 (MQ=255) aaCCTGGGCAAATATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACAtt > 1:588148/1‑70 (MQ=255) aaCCTGGGCAAATATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACAtt > 1:854522/1‑70 (MQ=255) aaCCTGGGCAAATATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACAtt > 1:2993491/1‑70 (MQ=255) aaCCTGGGCAAATATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACAtt > 1:195245/1‑70 (MQ=255) aaCCTGGGCAAATATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTc < 1:2609776/71‑1 (MQ=255) ccTGGGCAAATATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAg < 1:675999/71‑1 (MQ=255) cTGGGCAAATATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCActc < 1:2703935/52‑1 (MQ=255) gggCAAATATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAg > 1:4550999/1‑68 (MQ=255) gCAAATATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAg > 1:3469182/1‑66 (MQ=255) gatcgacttatttgcggcgaggcatcattcgtaacagagtattaTCTTTCATCACTACATTCa > 1:1071637‑M1/45‑63 (MQ=255) atcgacttatttgcggcgaggcatcattcgtaacagagtattaTCTTtc > 1:187664‑M1/44‑49 (MQ=255) aaTATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGataa < 1:925093/71‑1 (MQ=255) atatAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCa < 1:1583180/61‑1 (MQ=255) atatAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCa < 1:4006893/61‑1 (MQ=255) atatAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGataa > 1:3503516/1‑70 (MQ=255) tataGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGataata > 1:1882100/1‑71 (MQ=255) gacttatttgcggcgaggcatcattcgtaacagagtattaTCttt > 1:629548‑M1/41‑45 (MQ=255) tttgcggcgaggcatcattcgtaacagagtattaTCtt > 1:2410473‑M1/35‑38 (MQ=255) tttgcggcgaggcatcattcgtaacagagtattaTCtt > 1:1557143‑M1/35‑38 (MQ=255) tACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACt > 1:1325533/1‑46 (MQ=255) tACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGt > 1:4510638/1‑70 (MQ=255) tttAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGataata > 1:2863962/1‑59 (MQ=255) ttAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGaa < 1:4018735/70‑1 (MQ=255) tAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAat > 1:3983666/1‑70 (MQ=255) gaggcatcattcgtaacagagtattaTCTTTCATCACTACATTCAGaaa > 1:3672999‑M1/27‑49 (MQ=255) aaTCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTa > 1:4403254/1‑64 (MQ=255) aTCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGtt < 1:3088880/62‑1 (MQ=255) tCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAatgatg < 1:2515465/71‑1 (MQ=255) ggcatcattcgtaacagagtattaTCTTTCATCACTACATTCAGAAAGa < 1:3128555‑M1/25‑1 (MQ=255) gCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGcc < 1:2630969/71‑1 (MQ=255) gCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGc > 1:3366363/1‑70 (MQ=255) gCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGc > 1:2137181/1‑70 (MQ=255) gCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTcg > 1:1309876/1‑71 (MQ=255) cTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTcgc > 1:3762158/1‑71 (MQ=255) tCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGataa > 1:4994884/1‑45 (MQ=255) tCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTcgc > 1:2214791/1‑70 (MQ=255) cACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTcgccg > 1:3452922/1‑71 (MQ=255) cACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTcgccg > 1:1502734/1‑71 (MQ=255) aCGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGataata < 1:1055425/45‑1 (MQ=255) aCGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGataata < 1:3020511/45‑1 (MQ=255) gCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTg < 1:2926864/48‑1 (MQ=255) gCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTg < 1:3768990/48‑1 (MQ=255) cTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGat > 1:1887305/1‑38 (MQ=255) tGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAatgat < 1:1936044/57‑1 (MQ=255) tGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAatgat < 1:5125856/57‑1 (MQ=255) gcgcAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAAt < 1:1379322/69‑1 (MQ=255) gcgcAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAAt < 1:2987974/69‑1 (MQ=255) cagcaCTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGa < 1:236929/47‑1 (MQ=255) cagcaCTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTc < 1:3877539/71‑1 (MQ=255) agcaCTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAatgatg > 1:3653603/1‑52 (MQ=255) agcaCTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAatgatg > 1:5168522/1‑52 (MQ=255) agcaCTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTc > 1:1723951/1‑70 (MQ=255) caCTCTTTCATCACTACATTCAGAAAGATAATAct < 1:3435088/35‑1 (MQ=255) caCTCTGTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGa > 1:665229/1‑70 (MQ=255) aCTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATc < 1:895192/71‑1 (MQ=255) ctctTTCATCACTACATTCAGAAAGATAATACTCTGTTACGa > 1:3395278/1‑42 (MQ=255) ctctTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATc > 1:2521134/1‑70 (MQ=255) TCTTTCATCACTACATTCAGAAAGATAATACTCTGt > 1:4791446‑M1/1‑36 (MQ=255) TCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCaaa > 1:2551580‑M1/1‑59 (MQ=255) | AAAAATATTCACGAAACCTGGGCAAATATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAAGTCGATC > AP009048/2044907‑2045042 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |