| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 2037434 | 56 (1.000) | 3 (0.070) | 3/78 | NT | 6.4% | intergenic (+54/‑538) | yedS/hchA | ECK1962:JW5319+JW1948+JW1949:b4496; hypothetical protein/Hsp31 molecular chaperone |
| ? | AP009048 | = 2037442 | 45 (1.050) | intergenic (+62/‑530) | yedS/hchA | ECK1962:JW5319+JW1948+JW1949:b4496; hypothetical protein/Hsp31 molecular chaperone | |||||
Only 100 of 102 total aligned reads displayed.
AGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAATTGCCGAAG > AP009048/2037365‑2037502 | aGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCG < 1:2699186‑M1/70‑1 (MQ=255) gTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGt < 1:1960991/70‑1 (MQ=255) gTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGt < 1:4582679/70‑1 (MQ=255) tCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTcc > 1:3151731/1‑71 (MQ=255) tACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCt > 1:4118953/1‑71 (MQ=255) tACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCt > 1:3377018/1‑71 (MQ=255) ccAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTccc < 1:3389601/68‑1 (MQ=255) ccAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTc < 1:2604303/66‑1 (MQ=255) ccAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCt < 1:4150437/69‑1 (MQ=255) ccAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTc < 1:2261641/70‑1 (MQ=255) ccAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTc < 1:1261912/70‑1 (MQ=255) ccAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTc > 1:4982987/1‑70 (MQ=255) ccAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCa < 1:1190332/71‑1 (MQ=255) cAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTc < 1:4395860/69‑1 (MQ=255) gTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTcc > 1:3280070/1‑64 (MQ=255) tAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTc < 1:933686/63‑1 (MQ=255) tAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATcgaact < 1:1674358‑M2/71‑7 (MQ=255) aaTCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATcgaact < 1:4749682‑M2/70‑7 (MQ=255) aTCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGatgagggacgaact < 1:2463847‑M1/69‑15 (MQ=255) aTCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATcgaactc > 1:2386947‑M2/1‑63 (MQ=255) aTCAGTCAACTCGCTGCAGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATcgaact < 1:2104095‑M2/69‑7 (MQ=255) tCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTc > 1:4434857/1‑56 (MQ=255) aGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGatgagggacgaactca < 1:3614998‑M1/68‑17 (MQ=255) gTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATcgaactcaggct > 1:1485584‑M2/1‑59 (MQ=255) tCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCtt < 1:3084952/71‑1 (MQ=255) tCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCtt > 1:146791/1‑71 (MQ=255) aaCTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCtttt > 1:950726/1‑71 (MQ=255) aaCTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCtttt > 1:1111531/1‑71 (MQ=255) aCTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCttttt < 1:626914/71‑1 (MQ=255) aCTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCttttt < 1:537886/71‑1 (MQ=255) aCTCGCTGAGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCttttt < 1:1769036/71‑1 (MQ=255) cTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCtttttt < 1:3756595/71‑1 (MQ=255) cTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCtt < 1:3266564/67‑1 (MQ=255) cGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTAt > 1:1206403/1‑71 (MQ=255) gCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTAtt > 1:5180028/1‑71 (MQ=255) cTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATcgaact > 1:1588103‑M2/1‑50 (MQ=255) cTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATcgaac > 1:3846413‑M2/1‑50 (MQ=255) tGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGatgagggacgaactcaggctag > 1:3798798‑M1/1‑41 (MQ=255) tGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTcc > 1:3048162/1‑44 (MQ=255) cggcgTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCa > 1:1256741/1‑71 (MQ=255) cgTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCAt > 1:4153568/1‑44 (MQ=255) cgTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCAttt > 1:1200917/1‑71 (MQ=255) gtgtTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTc > 1:3824735/1‑41 (MQ=255) gtgtTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTc < 1:1954037/71‑1 (MQ=255) tgtTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCa > 1:1010849/1‑71 (MQ=255) gtTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCa > 1:347339/1‑70 (MQ=255) ttACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCAtc < 1:4212594/71‑1 (MQ=255) ttACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCAt < 1:327263/70‑1 (MQ=255) ttACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCAt < 1:1879382/70‑1 (MQ=255) tACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATcgaactca < 1:197778‑M2/47‑9 (MQ=255) tACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATcgaa < 1:1315546‑M2/43‑5 (MQ=255) tACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCAtct > 1:3533186/1‑71 (MQ=255) aCTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTAtt > 1:4034713/1‑58 (MQ=255) aCTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCAtctc > 1:3538460/1‑71 (MQ=255) cTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTcc < 1:332097/71‑1 (MQ=255) tGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCtttttt < 1:4896124/53‑1 (MQ=255) tGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCtttttt < 1:4726943/53‑1 (MQ=255) gTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTAt > 1:3904462/1‑54 (MQ=255) tAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCtt < 1:4738729/47‑1 (MQ=255) aaaaCTGAACACTAGCCTGAGTTCGTCCCTCATcgaa < 1:1080580‑M2/37‑5 (MQ=255) aaaaCTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCAtt < 1:4005455/59‑1 (MQ=255) aaaCTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCt < 1:2766390/70‑1 (MQ=255) aaaCTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTg > 1:1841615/1‑71 (MQ=255) cTGAACACTAGCCTGAGTTCGTCCCTCATcgaactcaggc < 1:547954‑M2/40‑12 (MQ=255) cTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCtttttt > 1:3433910/1‑46 (MQ=255) cTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCgg > 1:1744485/1‑71 (MQ=255) gAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGca > 1:56382/1‑71 (MQ=255) aaCACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCgg < 1:4515022/68‑1 (MQ=255) acacTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGcaca < 1:5008319/71‑1 (MQ=255) cacTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCacac < 1:2948311/71‑1 (MQ=255) cTAGCCTGAGTTCGTCCCTCATcgaactcaggctagtgttcagttttacagtaacacgccgca > 1:3798798‑M2/1‑22 (MQ=255) cTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGc < 1:2399426/71‑1 (MQ=255) cTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGc < 1:4637389/71‑1 (MQ=255) aGCCTGAGTTCGatgagggacgaactcaggctagtgttcagttttacagtaacacgccgcagcgagttgac > 1:1485584‑M1/1‑12 (MQ=255) gCCTGAGTTCGatgagggacgaactcaggctagtgttcag < 1:547954‑M1/40‑30 (MQ=255) gCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCa < 1:1566347/69‑1 (MQ=255) gCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAAt < 1:3249842/71‑1 (MQ=255) gCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAAt > 1:4799514/1‑71 (MQ=255) ccTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAAtt < 1:496416/71‑1 (MQ=255) tGAGTTCGatgagggacgaactcaggctagtgttcagttttacagta < 1:197778‑M1/47‑40 (MQ=255) tGAGTTCGTCCCTCATcgaactcaggctagtgttcagttttacagtaacacgccgcagcgagttgact < 1:3614998‑M2/68‑53 (MQ=255) tGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCa < 1:914533/40‑1 (MQ=255) tGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCAt < 1:2325359/46‑1 (MQ=255) tGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCgg < 1:576419/58‑1 (MQ=255) tGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAATTGc > 1:2068506/1‑71 (MQ=255) gAGTTCGatgagggacgaactcaggctagtgttcagttttacagtaacacgccgcagcgagttgactgat > 1:2386947‑M1/1‑7 (MQ=255) aGTTCGatgagggacgaactcaggctagtgttcagttttacagtaacacgctgcagcgagttgactgat < 1:2104095‑M1/69‑64 (MQ=255) aGTTCGatgagggacgaactcaggctagtgttcagttttacagtaacacgccgcagcgagttgactgatta < 1:1674358‑M1/71‑66 (MQ=255) aGTTCGatgagggacgaactcaggctagtgttcagttttacagtaacacgccgcagcgagttgactgatt < 1:4749682‑M1/70‑65 (MQ=255) aGTTCGatgagggacgaactcaggctagtgttcagttttacagtaacacgccgcag > 1:1588103‑M1/1‑6 (MQ=255) aGTTCGTCCCTCATcgaactcaggctagtgttcagttttacagtaacacgccgcagcgagttgactgat < 1:2463847‑M2/69‑56 (MQ=255) aGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAATTGc < 1:4022775/69‑1 (MQ=255) gTTCGatgagggacgaactcaggctagtgttcagttttacagtaacacgccgcag > 1:3846413‑M1/1‑5 (MQ=255) ttCGatgagggacgaactcaggctagtgttcagttttacagta < 1:1315546‑M1/43‑40 (MQ=255) ttCGatgagggacgaactcaggctagtgttcagtttt < 1:1080580‑M1/37‑34 (MQ=255) ttCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAATTGCCGaa < 1:2591240/71‑1 (MQ=255) cGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCAtc > 1:3702753/1‑41 (MQ=255) cGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCg < 1:590469/51‑1 (MQ=255) cGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAATTg > 1:3435349/1‑64 (MQ=255) cGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAATTGCCGAAg > 1:1898087/1‑70 (MQ=255) | AGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAATTGCCGAAG > AP009048/2037365‑2037502 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |