| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 3674466 = | 104 (1.850) | 5 (0.100) | 3/92 | NT | 5.8% | coding (1539/2022 nt) | rep | DNA helicase and single‑stranded DNA‑dependent ATPase |
| ? | AP009048 | 3674494 = | 69 (1.360) | coding (1511/2022 nt) | rep | DNA helicase and single‑stranded DNA‑dependent ATPase | |||||
Only 100 of 126 total aligned reads displayed.
GCAAAGTAAAGCGCGTCACCACCTGGGTGAGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTT > AP009048/3674396‑3674535 | gcatggattatgaatcctggctgtacgaaacatcccagcccgaaagccgccgaaatgcgcatgaagaaCg > 1:4272882‑M1/69‑70 (MQ=255) gTAAAGCGCGTCACCACCTGGGTGAGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCAt > 1:782926/1‑71 (MQ=255) tAAAGCGCGTCACCACCTGGGTGAGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATc < 1:4798279/71‑1 (MQ=255) aaGCGCGTCACCACCTGGGTGAGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTcc > 1:1311874/1‑63 (MQ=255) aGCGCGTCACCACCTGGGTGAGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAg > 1:1475806/1‑71 (MQ=255) cgcgTCACCACCTGGGTGAGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCt < 1:3299215/71‑1 (MQ=255) gcgTCACCACCTGGGTGAGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCt > 1:4751967/1‑70 (MQ=255) caccacCTGGGTGAGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTaaa > 1:896342/1‑69 (MQ=255) accaccTGGGTGAGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAg > 1:903249/1‑71 (MQ=255) accaccTGGGTGAGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAg < 1:1609286/71‑1 (MQ=255) caccTGGGTGAGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTaaa > 1:450858/1‑66 (MQ=255) caccTGGGTGAGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTaa > 1:1129049/1‑65 (MQ=255) caccTGGGTGAGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAgtt > 1:1728856/1‑71 (MQ=255) caccTGGGTGAGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAgtt > 1:1745128/1‑71 (MQ=255) caccTGGGTGAGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGGCATCCAGCTAAACAgtt < 1:4620596/71‑1 (MQ=255) ccTGGGTGAGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAgttgg < 1:1846808/71‑1 (MQ=255) ccTGGGTGAGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAgttgg < 1:865825/71‑1 (MQ=255) cTGGGTGAGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAgttggt < 1:2989132/71‑1 (MQ=255) gggTGAGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAgtt < 1:2358645/66‑1 (MQ=255) gggTGAGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAgtt < 1:2364824/66‑1 (MQ=255) ggTGAGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAgttggttg < 1:2484276/70‑1 (MQ=255) ggTGAGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAgttggtt < 1:2565476/69‑1 (MQ=255) gAGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGa < 1:1425439/68‑1 (MQ=255) aGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGtt > 1:1352201/1‑71 (MQ=255) aGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGt < 1:3526846/70‑1 (MQ=255) aGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGt < 1:2944999/70‑1 (MQ=255) aGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGt < 1:4883846/70‑1 (MQ=255) cGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGttct < 1:4108100/71‑1 (MQ=255) cGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGttct < 1:1911977/71‑1 (MQ=255) cGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGttct < 1:3209273/71‑1 (MQ=255) tCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGttcttc < 1:4407609/71‑1 (MQ=255) aTCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGttcttc > 1:5095119/1‑69 (MQ=255) aTCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCAt > 1:106519/1‑71 (MQ=255) tCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATcc > 1:1565762/1‑42 (MQ=255) tCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATcc > 1:2308977/1‑42 (MQ=255) tCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATcc > 1:3907782/1‑42 (MQ=255) tCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAgttg < 1:3684325/55‑1 (MQ=255) cGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCg < 1:1608154/35‑1 (MQ=255) cGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCg < 1:410071/35‑1 (MQ=255) gCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAgttggttg < 1:3937726/56‑1 (MQ=255) gCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATgcgc < 1:2195841/71‑1 (MQ=255) gCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATgcgc < 1:449145/71‑1 (MQ=255) cTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGa < 1:1573059/56‑1 (MQ=255) cTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCa < 1:2948965/71‑1 (MQ=255) tCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCAt > 1:249222/1‑71 (MQ=255) gcgaaagccgccgaaatgcgcatgaagaaCGTCATCCAGCTAAACAgttggtt > 1:80276‑M1/30‑53 (MQ=255) ccgaaagccgccgaaatgcgcatgaagaaCGTCATCCAGCTAAACAgttggtt > 1:3702731‑M1/30‑53 (MQ=255) gaaagccgccgaaatgcgcatgaagaaCGTCATCCAGCTAAACAGTTGGTTGa < 1:298582‑M1/26‑1 (MQ=255) aTCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGttct < 1:4858522/59‑1 (MQ=255) aTCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGttct < 1:897980/59‑1 (MQ=255) aTCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCAttt > 1:2979213/1‑71 (MQ=255) aTCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCAt < 1:1073644/69‑1 (MQ=255) tCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAgttggttg < 1:1203547/51‑1 (MQ=255) tCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAg < 1:2493768/44‑1 (MQ=255) tCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTc < 1:3448253/71‑1 (MQ=255) ccAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCAt > 1:1216784/1‑61 (MQ=255) ccAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTc > 1:759974/1‑70 (MQ=255) aGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTcggc > 1:2869902/1‑71 (MQ=255) aGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTcggc > 1:2454744/1‑71 (MQ=255) gTTCACTGCGTTCCAGCATCTCCGTCATCCAGCTAAACAg < 1:4810871/40‑1 (MQ=255) gTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTcggcg > 1:4929964/1‑71 (MQ=255) ttCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTcggcgg < 1:678199/71‑1 (MQ=255) ttCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTcggcg > 1:4154081/1‑70 (MQ=255) ccgaaatgcgcatgaagaaCGTCATCCAGCTAAACAgttggttg > 1:2288458‑M1/20‑44 (MQ=255) cACTGCCTTCCAGCATTTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCt > 1:3997582/1‑71 (MQ=255) cACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATgc > 1:523259/1‑57 (MQ=255) cACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCt > 1:629905/1‑71 (MQ=255) cACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCt > 1:1735560/1‑71 (MQ=255) aCTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCtt < 1:3227788/71‑1 (MQ=255) aCTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCtt < 1:2165308/71‑1 (MQ=255) cTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCttt < 1:1973337/71‑1 (MQ=255) tGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGAc > 1:4932854/1‑43 (MQ=255) tGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGAc > 1:2204701/1‑43 (MQ=255) tGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGAc > 1:11499/1‑43 (MQ=255) aaatgcgcatgaagaaCGTCATCCAGCTAAACAgttggtt > 1:3708667‑M1/17‑40 (MQ=255) ccTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGa > 1:2322347/1‑40 (MQ=255) ccTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATgc < 1:4041210/52‑1 (MQ=255) ccTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTc < 1:622654/69‑1 (MQ=255) ccTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCgg < 1:3643391/71‑1 (MQ=255) cTTCCAGCATCTCCGTCATCCAGCTAAACAgttggtt > 1:396155/1‑37 (MQ=255) cTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCggg > 1:234619/1‑71 (MQ=255) ttCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGttctt < 1:1790617/45‑1 (MQ=255) tCCAGCATCTCCGTCCTCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCAtt > 1:4076775/1‑54 (MQ=255) tCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCAttt < 1:4316128/55‑1 (MQ=255) tCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCt > 1:1051947/1‑71 (MQ=255) ccAGCATCTCCGTCATCCAGGTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCt < 1:1420735/70‑1 (MQ=255) ccAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTcgg > 1:3207089/1‑57 (MQ=255) ccAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTg > 1:3908377/1‑71 (MQ=255) cAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTgg > 1:2734034/1‑71 (MQ=255) cAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTg < 1:5124385/70‑1 (MQ=255) cAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTg < 1:3549407/70‑1 (MQ=255) gCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGc < 1:611908/71‑1 (MQ=255) cATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCg < 1:2917508/71‑1 (MQ=255) aTCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCtt < 1:2917240/58‑1 (MQ=255) aTCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGa > 1:2627916/1‑71 (MQ=255) aTCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGa > 1:2621986/1‑71 (MQ=255) ctcCGTCATCCAGCTAAACAGTTGGTTGACGttctt > 1:5065468/1‑36 (MQ=255) ctcCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTg > 1:3413115/1‑64 (MQ=255) CGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGc > 1:1826465‑M1/1‑64 (MQ=255) CGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGt > 1:2260482‑M1/1‑69 (MQ=255) | GCAAAGTAAAGCGCGTCACCACCTGGGTGAGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTT > AP009048/3674396‑3674535 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |