| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 3674466 = | 104 (1.850) | 5 (0.100) | 3/92 | NT | 5.8% | coding (1539/2022 nt) | rep | DNA helicase and single‑stranded DNA‑dependent ATPase |
| ? | AP009048 | 3674494 = | 69 (1.360) | coding (1511/2022 nt) | rep | DNA helicase and single‑stranded DNA‑dependent ATPase | |||||
Only 100 of 109 total aligned reads displayed.
AGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTCGTACAGCCAGGATTCATAATCCATGC > AP009048/3674425‑3674563 | aGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGtt > 1:1352201/1‑71 (MQ=255)aGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGt < 1:2944999/70‑1 (MQ=255)aGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGt < 1:3526846/70‑1 (MQ=255)aGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGt < 1:4883846/70‑1 (MQ=255) cGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGttct < 1:3209273/71‑1 (MQ=255) cGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGttct < 1:1911977/71‑1 (MQ=255) cGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGttct < 1:4108100/71‑1 (MQ=255) tCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGttcttc < 1:4407609/71‑1 (MQ=255) aTCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGttcttc > 1:5095119/1‑69 (MQ=255) aTCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCAt > 1:106519/1‑71 (MQ=255) gCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATgcgc < 1:449145/71‑1 (MQ=255) cTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCa < 1:2948965/71‑1 (MQ=255) tCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCAt > 1:249222/1‑71 (MQ=255) aTCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGttct < 1:4858522/59‑1 (MQ=255) aTCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGttct < 1:897980/59‑1 (MQ=255) aTCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCAt < 1:1073644/69‑1 (MQ=255) tCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGttctt < 1:2566171/59‑1 (MQ=255) tCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTc < 1:3448253/71‑1 (MQ=255) ccAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGtt > 1:1689577/1‑55 (MQ=255) ccAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCAt > 1:1216784/1‑61 (MQ=255) ccAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTc > 1:759974/1‑70 (MQ=255) aGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTcggc > 1:2869902/1‑71 (MQ=255) aGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTcggc > 1:2454744/1‑71 (MQ=255) gTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTcggcg > 1:4929964/1‑71 (MQ=255) ttCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTcggcgg < 1:288925/71‑1 (MQ=255) ttCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTcggcgg < 1:678199/71‑1 (MQ=255) ttCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTcggcg > 1:4154081/1‑70 (MQ=255) cACTGCCTTCCAGCATTTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCt > 1:3997582/1‑71 (MQ=255) cACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATgc > 1:523259/1‑57 (MQ=255) cACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCt > 1:629905/1‑71 (MQ=255) cACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCt > 1:1735560/1‑71 (MQ=255) aCTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCtt < 1:2165308/71‑1 (MQ=255) aCTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCtt < 1:3227788/71‑1 (MQ=255) aCTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCtt < 1:1130495/71‑1 (MQ=255) cTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCttt < 1:1973337/71‑1 (MQ=255) gCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCg > 1:2954092/1‑71 (MQ=255) ccTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATgc < 1:4041210/52‑1 (MQ=255) ccTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTc < 1:622654/69‑1 (MQ=255) ccTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCgg < 1:3643391/71‑1 (MQ=255) cTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCggg > 1:234619/1‑71 (MQ=255) ttCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGttctt < 1:1790617/45‑1 (MQ=255) ttCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGc > 1:1504022/1‑71 (MQ=255) tCCAGCATCTCCGTCCTCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCAtt > 1:4076775/1‑54 (MQ=255) tCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCAttt < 1:4316128/55‑1 (MQ=255) tCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCt > 1:1051947/1‑71 (MQ=255) ccAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTcgg > 1:3207089/1‑57 (MQ=255) ccAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTg > 1:3908377/1‑71 (MQ=255) cAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTgg > 1:2734034/1‑71 (MQ=255) cAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTg > 1:4964442/1‑70 (MQ=255) cAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTg < 1:3549407/70‑1 (MQ=255) gCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGc > 1:1341830/1‑71 (MQ=255) gCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGc < 1:611908/71‑1 (MQ=255) cATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCg < 1:4811218/71‑1 (MQ=255) cATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCg < 1:2917508/71‑1 (MQ=255) aTCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCtt < 1:2917240/58‑1 (MQ=255) aTCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGa > 1:2621986/1‑71 (MQ=255) ctcCGTCATCCAGCTAAACAGTTGGTTGACGttctt > 1:5065468/1‑36 (MQ=255) ctcCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTg > 1:3413115/1‑64 (MQ=255) ccGTCATCCAGCTAAACAGTTGGTTGACGttcttc > 1:4358072/1‑35 (MQ=255) CGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGc > 1:1826465‑M1/1‑64 (MQ=255) CGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGtt > 1:180904‑M1/1‑70 (MQ=255) CGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGt > 1:2260482‑M1/1‑69 (MQ=255) CGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGt > 1:3883570‑M1/1‑69 (MQ=255) GTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTc > 1:2767685‑M1/1‑71 (MQ=255) tcaaccaactgtttagctggatgacgTTCTTCATGCGCATTTCGGCGGCTTTc < 1:298582‑M2/27‑1 (MQ=255) TCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTCg > 1:4649623‑M1/1‑71 (MQ=255) TCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTCg > 1:2443555‑M1/1‑71 (MQ=255) TCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGG‑GGCTTTCGGGCTGGGCGATGTTTCGt > 1:4528706‑M1/1‑71 (MQ=255) caaccaactgtttagctggatgacgTTCTTCATGCGCATTTcgg > 1:2288458‑M2/26‑44 (MQ=255) aaccaactgtttagctggatgacgTTCTTCATGCGCAttt > 1:3708667‑M2/25‑40 (MQ=255) aaccaactgtttagctggatgacgTTCTTCATGCGCATTTCGGCGGCTTTcgc > 1:80276‑M2/25‑52 (MQ=255) aaccaactgtttagctggatgacgTTCTTCATGCGCATTTCGGCGGCTTTCgg > 1:3702731‑M2/25‑53 (MQ=255) ATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGttt < 1:2722390‑M1/67‑1 (MQ=255) ATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTCGTa < 1:1067966‑M1/71‑1 (MQ=255) ATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTCGTa > 1:2457408‑M1/1‑71 (MQ=255) ccAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTc < 1:797007/39‑1 (MQ=255) ccAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTc < 1:2184082/39‑1 (MQ=255) ccAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCttt > 1:1343053/1‑48 (MQ=255) cAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTCGTACAg < 1:377100/71‑1 (MQ=255) cAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTCGTACAg > 1:1900179/1‑71 (MQ=255) aGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTCGTACAGc > 1:3398506/1‑71 (MQ=255) aGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTCGTACAGc < 1:385233/71‑1 (MQ=255) tAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCttt > 1:3998446/1‑43 (MQ=255) aaaCAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCtt < 1:4985651/41‑1 (MQ=255) aaCAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTCGTACAGCCAgg < 1:3127434/70‑1 (MQ=255) aaCAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTCGTACAGCCAg < 1:2471083/69‑1 (MQ=255) aaCAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTCGTACAGCCAg < 1:688905/69‑1 (MQ=255) cAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTCGTACAGCCAGGAtt > 1:4346622/1‑71 (MQ=255) aGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTCGTAc > 1:1244110/1‑60 (MQ=255) gttggttgACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTCGTa < 1:1177218/58‑1 (MQ=255) gttggttgACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTCGTACAGCCAGTATTCa < 1:4274293/71‑1 (MQ=255) tggttgACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTCGTACAGCCAGGATTCAt > 1:951020/1‑70 (MQ=255) tggttgACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTCGTACAGCCAGGATTCAt > 1:3914739/1‑70 (MQ=255) ggttgACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTCGTACAGCCAGGATTCATaa > 1:4301047/1‑71 (MQ=255) ggttgACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTCGTACAGCCAGGATTCATa < 1:3243723/70‑1 (MQ=255) ttgACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTCGTACAGCCAGGATTc < 1:2944833/65‑1 (MQ=255) ttgACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTCGTACAGCCAGGATTCATAATc < 1:1347790/71‑1 (MQ=255) gacgTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTCGTACAGCCAGGATTCATAATcc < 1:3995970‑M2/66‑1 (MQ=255) acgTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTCGTACAGCCAGGATTCATAATCCa < 1:2482196‑M2/67‑1 (MQ=255) cgTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGG‑‑GATGTTTCGTACAGCCAGGATTCATAATCCATGc > 1:4272882‑M2/3‑70 (MQ=255) | AGCGTCATCGGCTCATCCAGTTCACTGCCTTCCAGCATCTCCGTCATCCAGCTAAACAGTTGGTTGACGTTCTTCATGCGCATTTCGGCGGCTTTCGGGCTGGGCGATGTTTCGTACAGCCAGGATTCATAATCCATGC > AP009048/3674425‑3674563 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |