| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 427841 | 56 (1.000) | 3 (0.060) | 3/90 | NT | 5.5% | coding (971/1848 nt) | secD | SecYEG protein translocase auxillary subunit |
| ? | AP009048 | = 427846 | 54 (1.090) | coding (976/1848 nt) | secD | SecYEG protein translocase auxillary subunit | |||||
TGAAGTGAAACAGACCCGCGAAGGTCAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTAACATCTCGCTCGATAGCGCTG > AP009048/427776‑427915 | tGAAGTGAAACAGACCCGCGAAGGTCAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCata > 1:949660/1‑71 (MQ=255) aaGTGAAACAGACCCGCGAAGGTCAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATAt > 1:1109373‑M2/1‑69 (MQ=255) aGTGAAACAGACCCGCGAAGGTCAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCata > 1:4621081/1‑68 (MQ=255) tGAAACAGACCCGCGAAGGTCAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATAtcacc > 1:682859‑M2/1‑66 (MQ=255) aaaCAGACCCGCGAAGGTCAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATAtcaccg > 1:5125110‑M2/1‑64 (MQ=255) aaCAGACCCGCGAAGGTCAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGAc < 1:4884374/71‑1 (MQ=255) aaCAGACCCGCGAAGGTCAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGAc < 1:212678/71‑1 (MQ=255) cAGACCCGCGAAGGTCAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTc < 1:2685731/71‑1 (MQ=255) aGACCCGCGAAGGTCAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTcc < 1:4991454/71‑1 (MQ=255) gACCCGCTAAGGTCAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGAc < 1:4299942/67‑1 (MQ=255) gACCCGCGAAGGTCAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGa < 1:4450176/66‑1 (MQ=255) cgcgAAGGTCAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTc < 1:3375534/71‑1 (MQ=255) gcgAAGGTCAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTc < 1:71902/64‑1 (MQ=255) gcgAAGGTCAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTcc < 1:2917964/71‑1 (MQ=255) cgAAGGTCAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTc > 1:4780696/1‑69 (MQ=255) gAAGGTCAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTccag > 1:2772401/1‑71 (MQ=255) gAAGGTCAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTcca < 1:2475600/70‑1 (MQ=255) gTCAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGAc < 1:4224560/56‑1 (MQ=255) gTCAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTccagccag < 1:2595910/71‑1 (MQ=255) cAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTcc > 1:3565339/1‑63 (MQ=255) cAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGa > 1:1095680/1‑71 (MQ=255) gCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTccag < 1:5167345/63‑1 (MQ=255) gCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACg < 1:1081518/71‑1 (MQ=255) ccAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGa < 1:1243715/71‑1 (MQ=255) ccAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGa < 1:1671852/71‑1 (MQ=255) cAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGaa > 1:3868363/1‑71 (MQ=255) aGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAAt < 1:150059/71‑1 (MQ=255) aGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAAt < 1:576653/71‑1 (MQ=255) aGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAAt < 1:3986638/71‑1 (MQ=255) gTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTccagcc < 1:4944626/61‑1 (MQ=255) gtgCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGAc < 1:2964051/63‑1 (MQ=255) gTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGaa > 1:3295491/1‑61 (MQ=255) cAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCg > 1:4192101/1‑70 (MQ=255) aaCGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTccagcca > 1:5061333/1‑49 (MQ=255) aaCGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTccagcca > 1:4311641/1‑49 (MQ=255) aaCGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAg > 1:27054/1‑71 (MQ=255) aCGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATAcaaccaa > 1:5063155/1‑64 (MQ=255) aCGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAgg < 1:2294158/71‑1 (MQ=255) aCGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAgg > 1:4490297/1‑71 (MQ=255) gTAATTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATAca < 1:1755854/55‑1 (MQ=255) gTAATTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGtt < 1:33407/69‑1 (MQ=255) gTAATTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTaa > 1:1733022/1‑71 (MQ=255) gTAATTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTaa > 1:1726627/1‑71 (MQ=255) aaTTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTAACa > 1:2328501/1‑71 (MQ=255) aTTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTAACAt < 1:2086492/71‑1 (MQ=255) ttCTGACCGGTGACCATATCCCCGACTCCACTTccagcc > 1:2720984/1‑39 (MQ=255) ttCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATAcaacca < 1:4757409/55‑1 (MQ=255) ttCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTAACAtc < 1:1195384/71‑1 (MQ=255) ttCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTAACAtc > 1:4386247/1‑71 (MQ=255) ttCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTAACAtc < 1:2850447/71‑1 (MQ=255) gACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCG‑AGGTTAACATctcgct > 1:1538307/1‑71 (MQ=255) aCCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAg < 1:2764403/57‑1 (MQ=255) aCCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAg < 1:4789335/57‑1 (MQ=255) aCCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTAACAtctc < 1:1561741/68‑1 (MQ=255) aCCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTAACAtctc < 1:4816961/68‑1 (MQ=255) aCCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTAACATctcgct < 1:1977334/71‑1 (MQ=255) ccGGTGACCATAtcaccggtcagaattacgcgtttgtacagcacaactggctgaccttcgcgggtctgttt < 1:4079482‑M2/71‑60 (MQ=255) ccGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTAAc > 1:2694410/1‑62 (MQ=255) cGGTGACCATAtcaccggtcagaattacgcgtttgtacagcac > 1:65399‑M2/1‑11 (MQ=255) cGGTGACCATAtcaccggtcagaattacgcgtttgtacagca < 1:4886482‑M2/42‑32 (MQ=255) cGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATAcaaccaa < 1:1515871/49‑1 (MQ=255) cGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGtt < 1:4150081/58‑1 (MQ=255) cGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTAACATctcgctcg < 1:2661158/71‑1 (MQ=255) cGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTAACATctcgctcg < 1:2092394/71‑1 (MQ=255) ggTGACCATATCACCGACTCCACTTCCAGCCAGGACGaa > 1:2408371/1‑39 (MQ=255) ggTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATAcaaccaa < 1:1088679/48‑1 (MQ=255) ggTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTAACATCTCGCTCGa > 1:4165859/1‑71 (MQ=255) ggTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTAACATCTCGCTCGa > 1:3274786/1‑71 (MQ=255) ggTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTAACATCTCGCTCGa < 1:1965006/71‑1 (MQ=255) gACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACAAACCGCAGGTTAACAtct > 1:5050599/1‑61 (MQ=255) ccATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTAACATCTCGCTCGATAgcg > 1:974417/1‑71 (MQ=255) cATATCACCGACTCCACTTCCAGCCAGGACGAATAc < 1:4959448/36‑1 (MQ=255) atatCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTAACATctcgctc < 1:371848/62‑1 (MQ=255) atatCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTAACATCTCGCTCGATAGCGCt < 1:4128012/71‑1 (MQ=255) tatCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTAACATCTCTCTCGATAGCGCtg < 1:1541652/71‑1 (MQ=255) | TGAAGTGAAACAGACCCGCGAAGGTCAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTAACATCTCGCTCGATAGCGCTG > AP009048/427776‑427915 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |