| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 2736154 | 33 (0.470) | 4 (0.060) | 3/88 | NT | 9.6% | coding (1298/2115 nt) | fusA | protein chain elongation factor EF‑G |
| ? | Exported | = 2736178 | 46 (0.740) | coding (1322/2115 nt) | fusA | protein chain elongation factor EF‑G | |||||
AGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2736094‑2736154‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtctTCTTTAGCCAGACGGCCCAGAGCCAGACCCATTTTTTCCTGGTCAGCTTTGGTTTTCGGTTCAACTGCGA < Exported/2736178‑2736109 AGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTC > 1:364401/1‑60AGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTC > 1:724111/1‑60AGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGT > 1:1317386/1‑59 CCAAAGCTGACCAGGAAAAAATGGGTCTTCTTTAGCCAGACGGCCCAGAGCCA < 1:1271939/53‑1 AAAGCTGACCAGGAAAAAATGGGTCTTCTTTAGCCAGACGGCCCAGAGCCAGA > 1:2300992/1‑53 AAAGCTGACCAGGAAAAAATGGGTCTTCTTTAGCCAGACGGCCCAGAGCCAGA > 1:4203764/1‑53 AAGCTGACCAGGAAAAAATGGGTCTTCTTTAGCCAGACGGCCCAGAGCCAGA < 1:3183773/52‑1 GGGTCTTCTTTAGCCAGACGGCCCAGAGCCAGACCCATTTTTTCCTGGTCAGCTTTGGTTTTCG > 1:551846/1‑64 GTCTTCTTTAGCCAGACGGCCCAGAGCCAGACCCA < 1:1016075/35‑1 TCTTCTTTAGCCAGACGGCCCAGAGCCAGACCCATTTTTTCCTGGTCAGCTTTGGTTTTCGGTTCAACTGC < 1:146601/71‑1 TCTTCTTTAGCCAGACGGCCCAGAGCCAGACCCATTTTTTCCTGGTCAGCTTTGGTTTTCGGTTCAACTGC < 1:565365/71‑1 CTTCTTTAGCCAGACGGCCCAGAGCCAGACCCATTTTTTCCTGGTCAGCTTTGGTTTTCGGTTCAACTGC > 1:2446135/1‑70 TTCTTTAGCCAGACGGCCCAGAGCCAGACCCATTTTTTCCTGGTCAGCTTTGGTTTTCGGTTCAACTGCGA > 1:1786248/1‑71 TTCTTTAGCCAGACGGCCCAGAGCCAGACCCATTTTTTCCTGGTCAGCTTTGGTT < 1:4208427/55‑1 AGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2736094‑2736154‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtctTCTTTAGCCAGACGGCCCAGAGCCAGACCCATTTTTTCCTGGTCAGCTTTGGTTTTCGGTTCAACTGCGA < Exported/2736178‑2736109 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |