| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 2736154 | 33 (0.470) | 4 (0.060) | 3/88 | NT | 9.6% | coding (1298/2115 nt) | fusA | protein chain elongation factor EF‑G |
| ? | Exported | = 2736178 | 46 (0.740) | coding (1322/2115 nt) | fusA | protein chain elongation factor EF‑G | |||||
TCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGTATGGGCGAACTG > Exported/2736109‑2736248 | tCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAa > 1:1786248‑M2/1‑70 (MQ=255) gCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAaga < 1:146601‑M2/71‑4 (MQ=255) gCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAaga < 1:565365‑M2/71‑4 (MQ=255) gCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAag > 1:2446135‑M2/1‑68 (MQ=255) ccGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCttt < 1:1732930/71‑1 (MQ=255) cGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAagaccc > 1:551846‑M2/1‑58 (MQ=255) cGAAAACCAAAGCTGACCAGGAAAAAATGGGGCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTc < 1:2599509/71‑1 (MQ=255) aaaaCCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCg > 1:262711/1‑71 (MQ=255) aaCCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAaaga > 1:3482072/1‑54 (MQ=255) aaCCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAa < 1:4208427‑M2/55‑2 (MQ=255) cAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCgtg < 1:4134651/68‑1 (MQ=255) cAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCgtg < 1:1350630/68‑1 (MQ=255) aaGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCg > 1:123008/1‑56 (MQ=255) aaGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATg < 1:964369/70‑1 (MQ=255) aGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGa > 1:1501730/1‑71 (MQ=255) gCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTcc < 1:1224912/61‑1 (MQ=255) cTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACt < 1:328097/71‑1 (MQ=255) gACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGa > 1:3679124/1‑71 (MQ=255) gACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGa > 1:1219/1‑71 (MQ=255) aCCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTg < 1:3774540/69‑1 (MQ=255) gAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCgtg < 1:2773946/55‑1 (MQ=255) aaaTGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATc > 1:773176/1‑70 (MQ=255) tGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAagac < 1:1016075‑M2/35‑5 (MQ=255) tGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTa > 1:1198822/1‑50 (MQ=255) tGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTa > 1:1774146/1‑50 (MQ=255) ggTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAAt > 1:1535042/1‑64 (MQ=255) tCTGGCTCTGGGCCGTCTGGCTAAAGAagacccattttttcctggtcagcttt > 1:4203764‑M2/1‑27 (MQ=255) tCTGGCTCTGGGCCGTCTGGCTAAAGAagacccattttttcctggtcagcttt > 1:2300992‑M2/1‑27 (MQ=255) tCTGGCTCTGGGCCGTCTGGCTAAAGAagacccattttttcctggtcagctt < 1:3183773‑M2/52‑26 (MQ=255) tGGCTCTGGGCCGTCTGGCTAAAGAagacccattttttcctggtcagctttgg < 1:1271939‑M2/53‑29 (MQ=255) gCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACgaag > 1:4306342/1‑55 (MQ=255) gCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTaa > 1:185939/1‑62 (MQ=255) gCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTaa > 1:1956232/1‑62 (MQ=255) gCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACcat > 1:2272998/1‑71 (MQ=255) ctctGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACcat > 1:2930653/1‑70 (MQ=255) tctGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAAc > 1:2073661/1‑61 (MQ=255) tctGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACcatca > 1:1280568/1‑71 (MQ=255) tctGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACcatca > 1:3408752/1‑71 (MQ=255) ctGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCt < 1:3707415/57‑1 (MQ=255) tGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACca < 1:3506047/66‑1 (MQ=255) tGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACca < 1:1181448/66‑1 (MQ=255) tGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACca < 1:2998331/66‑1 (MQ=255) tGGGCCGTCGGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCt < 1:3390037/56‑1 (MQ=255) gggCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATcg > 1:663484/1‑71 (MQ=255) gggCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATcg > 1:3828156/1‑71 (MQ=255) ggCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATcgc > 1:4065508/1‑71 (MQ=255) ggCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATcgc < 1:1453086/71‑1 (MQ=255) ggCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATcgc > 1:424912/1‑71 (MQ=255) cGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATCGCggg < 1:2547347/71‑1 (MQ=255) cGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATCGCggg < 1:2966087/71‑1 (MQ=255) gTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGt < 1:2976771/71‑1 (MQ=255) tCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGTa > 1:1270420/1‑71 (MQ=255) tCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGTa > 1:1884292/1‑71 (MQ=255) tGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGTa > 1:283456/1‑69 (MQ=255) gCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGTATggg > 1:3586677/1‑71 (MQ=255) cTAAAGAAGTCCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGTATGGGc > 1:3027183/1‑71 (MQ=255) cTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGTATGGGc > 1:1494079/1‑71 (MQ=255) tAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACcat > 1:1895254/1‑54 (MQ=255) tAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACcat > 1:457355/1‑54 (MQ=255) aagaagACCCGTCTTTCCGTGTATGGACTGACGAAGAATCt < 1:2807825/41‑1 (MQ=255) aagaagACCCGTCTTTCCGTGTATGGACTGACGAAGAATCt < 1:1271999/41‑1 (MQ=255) aagaagACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGTATGGGCGaa > 1:3531670/1‑71 (MQ=255) aagaagACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGTATGGGCGaa > 1:3342557/1‑71 (MQ=255) agaagaCCCGTCTTTCCGTGTATGGACTGACgaagaa > 1:168683/1‑37 (MQ=255) agaagaCCCGTCTTTCCGTGTATGGACTGACGAAGAAt > 1:4421074/1‑38 (MQ=255) agaagaCCCGTCTTTCCGTGTATGGACTGACGAAGAAt > 1:342765/1‑38 (MQ=255) agaagaCCCGTCTTTCCGTGTATGGACTGACGAAGAATCt < 1:2418767/40‑1 (MQ=255) agaagaCCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATCGCgg > 1:1845002/1‑59 (MQ=255) aagaCCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGTATGGGCg > 1:794753/1‑66 (MQ=255) aagaCCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGTATGGGCGAACTg > 1:414454/1‑71 (MQ=255) | TCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGTATGGGCGAACTG > Exported/2736109‑2736248 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |