New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Exported = 436833114 (1.070)150 (1.410) 39/98 NT 57.1% coding (546/546 nt) seqA regulatory protein for replication initiation
?Exported 1803907 = 111 (1.040)intergenic (+63/‑28) ygaH/mprA predicted inner membrane protein/DNA‑binding transcriptional regulator

Only 100 of 182 total aligned reads displayed.

ATCGAACACATCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Exported/436765‑436833
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATT  >  Exported/1803907‑1803975
                                                                                                                                          
ATCGAACACATCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACG                                                                     <  1:4630952/71‑1
ATCGAACACATCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACG                                                                     <  1:3221209/71‑1
     ACACATCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGA                                                                <  1:1783699/71‑1
     ACACATCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGA                                                                <  1:2818135/71‑1
      CACATCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAA                                                               <  1:2441916/71‑1
      CACATCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAA                                                               <  1:3443230/71‑1
      CACATCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAA                                                               <  1:6137163/71‑1
      CACATCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAA                                                               <  1:5659675/71‑1
      CACATCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAA                                                               <  1:279483/71‑1
         ATCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAAT                                                             >  1:5583853/1‑70
         ATCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAAT                                                             >  1:4300054/1‑70
          TCATGCAGTCGATGCAATTCCCGTCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTA                                                           <  1:1441355/71‑1
          TCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTA                                                           <  1:5884090/71‑1
          TCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTA                                                           <  1:6568419/71‑1
          TCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTA                                                           <  1:2468416/71‑1
          TCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTA                                                           <  1:5611537/71‑1
          TCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTA                                                           <  1:4996969/71‑1
          TCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATT                                                            <  1:31865/70‑1
            ATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAAT                                                         >  1:3980688/1‑71
               CAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAG                                                      <  1:3477418/71‑1
                  TCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGT                                                    >  1:5238435/1‑70
                  TCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGA                                                                <  1:4270067/58‑1
                    GATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCAT                                                 <  1:1557963/71‑1
                    GATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCAT                                                 <  1:5513165/71‑1
                     ATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCA                                                  <  1:5470543/69‑1
                      TGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAA                                                          >  1:4532147/1‑60
                         AATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCA                                            <  1:1908918/71‑1
                          ATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCA                                            >  1:6940898/1‑70
                           TTCCCGGCGGAATTGATTGAGAAGGTTTGGGAACTATCTAACGGCTGAAATTAATGAGGTCA                                                  >  1:6368197/1‑62
                             CCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAATG                                        >  1:4337508/1‑71
                             CCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAATG                                        >  1:3179327/1‑71
                              CCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAATG                                        <  1:3920339/70‑1
                              CCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTA                                                           >  1:6599374/1‑51
                              CCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGA                                                                <  1:1915396/46‑1
                              CCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGA                                                                <  1:2939905/46‑1
                               CGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAATGGA                                      <  1:16519/71‑1
                                GGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCATATGGAT                                     <  1:6699/71‑1
                                GGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATG                                                        <  1:707751/52‑1
                                GGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATG                                                        <  1:1409945/52‑1
                                  CGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAATGGATAG                                   >  1:5418638/1‑71
                                  CGGAATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAG                                                      >  1:1527520/1‑52
                                      ATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATAC                                               >  1:6651975/1‑55
                                      ATTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATAC                                               >  1:520595/1‑55
                                       TTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGT                              <  1:1752626/71‑1
                                       TTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAAT                                                         <  1:3411216/44‑1
                                       TTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAA                                                          >  1:3094691/1‑43
                                       TTGATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATT                                                            <  1:6213441/41‑1
                                       TTGATTGAGAAGGTTTGGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTT                             <  1:6423092/71‑1
                                       TTGATTGACAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGT                              <  1:3764231/71‑1
                                         GATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTT                             <  1:835807/70‑1
                                         GATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTT                             <  1:4963971/70‑1
                                         GATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTT                             <  1:1354794/70‑1
                                         GATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCA                                                  >  1:3684487/1‑49
                                         GATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCA                                                  >  1:420187/1‑49
                                         GATTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCA                                                  >  1:441863/1‑49
                                           TTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTA                           >  1:2907369/1‑70
                                           TTGAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAA                                          >  1:4537951/1‑55
                                             GAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGC                        >  1:5627094/1‑71
                                             GAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAAT                                                         <  1:5830650/38‑1
                                             GAGAAGGTTTGCGGAACTATCTAACGGCTGAAATTAAT                                                         <  1:1476082/38‑1
                                               GAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATG                                                        <  1:2698878/37‑1
                                               GAAGGTTTGCGGAACTATCTAACGGCTGAAATTAATG                                                        <  1:6726692/37‑1
                                                AAGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTT                             >  1:6325289/1‑63
                                                 AGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAATGGAT                                     >  1:4112832/1‑54
                                                 AGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCA                                                  >  1:2210073/1‑41
                                                 AGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCA                                                  >  1:1557246/1‑41
                                                 AGGTTTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCA                                                  >  1:3156435/1‑41
                                                     TTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTGAA                >  1:2020918/1‑71
                                                     TTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTGAA                >  1:1662149/1‑71
                                                     TTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAA                                          >  1:2601535/1‑45
                                                     TTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAA                                          >  1:1449684/1‑45
                                                     TTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAA                                          >  1:5250807/1‑45
                                                     TTGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAA                                          >  1:1303993/1‑45
                                                      TGCGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAATGGAT                                     <  1:5142811/49‑1
                                                        CGGAACTATGTAACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAA             <  1:6801606/71‑1
                                                        CGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAA             <  1:3871043/71‑1
                                                        CGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAA             <  1:1200159/71‑1
                                                        CGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAA             <  1:4482183/71‑1
                                                        CGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAA             <  1:2466149/71‑1
                                                        CGGAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAA             <  1:3070343/71‑1
                                                          GAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAATGGA                                      <  1:426975/44‑1
                                                          GAACTATCTAACGGCTGAAATTAATGAGGTCATACCCAAATGGA                                      <  1:3372135/44‑1
                                                                TCTAACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAA      <  1:1491010/70‑1
                                                                 CTAACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAA    >  1:3292118/1‑71
                                                                 CTAACGGCTGAAATTAATGAGGTCATACCCAAATGGA                                      >  1:5886148/1‑37
                                                                 CTAACGGCTGAAATTAATGAGGTCATACCCAAATGGA                                      >  1:1826110/1‑37
                                                                 CTAACGGCTGAAATTAATGAGGTCATACCCAAATGGA                                      >  1:2763313/1‑37
                                                                 CTAACGGCTGAAATTAATGAGGTCATACCCAAATGGA                                      >  1:1602267/1‑37
                                                                 CTAACGGCTGAAATTAATGAGGTCATACCCAAATGGA                                      >  1:6193646/1‑37
                                                                 CTAACGGCTGAAATTAATGAGGTCATACCCAAATGGA                                      >  1:1037694/1‑37
                                                                 CTAACGGCTGAAATTAATGAGGTCATACCCAAATGGA                                      >  1:1541011/1‑37
                                                                 CTAACGGCTGAAATTAATGAGGTCATACCCAAATGGA                                      >  1:1043784/1‑37
                                                                  TAACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAAT   >  1:3205635/1‑71
                                                                  TAACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAAT   >  1:503794/1‑71
                                                                   AACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATT  >  1:1566399/1‑71
                                                                   AACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATT  >  1:5707935/1‑71
                                                                    ACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATT  <  1:4892992/70‑1
                                                                    ACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTA                           >  1:1736160/1‑45
                                                                    ACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTA                           >  1:4320056/1‑45
                                                                    ACGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTA                           >  1:4672716/1‑45
                                                                                                                                          
ATCGAACACATCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Exported/436765‑436833
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATT  >  Exported/1803907‑1803975

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.