New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Exported 2159817 =34 (0.320)6 (0.070) 3/84 NT 10.2% intergenic (+43/‑185) ispB/sfsB octaprenyl diphosphate synthase/DNA‑binding transcriptional regulator
?Exported 2159914 = 77 (0.850)intergenic (+140/‑88) ispB/sfsB octaprenyl diphosphate synthase/DNA‑binding transcriptional regulator

TTCAGAATATATAAAGATGCACATCCCTATTTTTCAGGTGTTATAGAGCTGAATAAGTGTTTTTATGGAACTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Exported/2159889‑2159817
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaacttTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAA  >  Exported/2159914‑2159983
                                                                                                                                               
TTCAGAATATATAAAGATGCACATCCCTATTTTTCAGGTGTTATAGAGCTGAATAAGTGTTTTTATGGAAC                                                                          >  1:2640136/1‑71
TTCAGAATATATAAAGATGCACATCCCTATTTTTCAGGTGTTATAGAGCTGAATAAGTGTTTTTATGGAA                                                                           >  1:5417249/1‑70
TTCAGAATATATAAAGATGCACATCCCTATTTTTCAGGTGTTATACAGCTGAATAAGTGTTTTAATGGAA                                                                           >  1:566636/1‑70
 TCAGAATATATAAAGATGCACATCCCTATTTTTCAGGTGTTATAGAGCTGAATAAGTGTTTTTATGGAACT                                                                         >  1:5052230/1‑71
  CAGAATATATAAAGATGCACATCCCTATTTTTCAGGTGTTATAGAGCTGAATAAGTGTTTTTATGGAACT                                                                         <  1:2364178/70‑1
                           TATTTTTCAGGTGTTATAGAGCTGAATAAGTGTTTTTATGGAACT                                                                         <  1:2010329/45‑1
                           TATTTTTCAGGTGTTATAGAGCTGAATAAGTGTTTTTATGGAACT                                                                         <  1:3017100/45‑1
                             TTTTTCAGGTGTTATAGAGCTGAATAAGTGTTTTTATGGA                                                                            <  1:1714310/40‑1
                             TTTTTCAGGTGTTATAGAGCTGAATAAGTGTTTTTATGGA                                                                            <  1:5978974/40‑1
                             TTTTTCAGGTGTTATAGAGCTGAATAAGTGTTTTTATGGA                                                                            <  1:3129723/40‑1
                             TTTTTCAGGTGTTATAGAGCTGAATAAGTGTTTTTATGGA                                                                            <  1:5073291/40‑1
                             TTTTTCAGGTGTTATAGAGCTGAATAAGTGTTTTTATGGA                                                                            <  1:3336152/40‑1
                             TTTTTCAGGTGTTATAGAGCTGAATAAGTGTTTTTATGGA                                                                            <  1:4780077/40‑1
                             TTTTTCAGGTGTTATAGAGCTGAATAAGTGTTTTTATGGA                                                                            <  1:4553441/40‑1
                                             GAGCTGAATAAGTGTTTTTATGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAG                              >  1:1745471/1‑70
                                                     TAAGTGTTTTTATGGAACTTTTTAGAGCAATAGGCCAT                                                      <  1:6745849/38‑1
                                                       AGTGTTTTTATGGAACTTTTTAGAGCAATAGGCCATCA                                                    >  1:4254015/1‑38
                                                       AGTGTTTTTATGGAACTTTTTAGAGCAATAGGCCATCA                                                    >  1:325279/1‑38
                                                       AGTGTTTTTATGGAACTTTTTAGAGCAATAGGCCATCA                                                    >  1:317029/1‑38
                                                       AGTGTTTTTATGGAACTTTTTAGAGCAATAGGCCATCA                                                    >  1:1826556/1‑38
                                                                   GAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAA               >  1:2119046/1‑63
                                                                      CTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGAGAGAAGAAGTGTTCTG                 <  1:206584/58‑1
                                                                       TTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATG             <  1:1513399/61‑1
                                                                        TTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAA  >  1:3538302/1‑71
                                                                                                                                               
TTCAGAATATATAAAGATGCACATCCCTATTTTTCAGGTGTTATAGAGCTGAATAAGTGTTTTTATGGAACTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Exported/2159889‑2159817
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaacttTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAA  >  Exported/2159914‑2159983

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.