| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 2159817 = | 34 (0.320) | 6 (0.070) | 3/84 | NT | 10.2% | intergenic (+43/‑185) | ispB/sfsB | octaprenyl diphosphate synthase/DNA‑binding transcriptional regulator |
| ? | Exported | 2159914 = | 77 (0.850) | intergenic (+140/‑88) | ispB/sfsB | octaprenyl diphosphate synthase/DNA‑binding transcriptional regulator | |||||
Only 100 of 122 total aligned reads displayed.
TAACACCTGAAAAATAGGGATGTGCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAAC > Exported/2159847‑2159984 | taACACCTGAAAAATAGGGATGTGCATCTTTATATATTCTGTATATTCACACTCTTTACAGGAACtttt < 1:3216214/69‑1 (MQ=255)taACACCTGAAAAATAGGGATGTGCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACttttt < 1:5385440/70‑1 (MQ=255)taACACCTGAAAAATAGGGATGTGCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACttt < 1:5887779/68‑1 (MQ=255)taACACCTGAAAAATAGGGATGTGCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACttt < 1:5554688/68‑1 (MQ=255)taACACCTGAAAAATAGGGATGTGCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACttt < 1:6773213/68‑1 (MQ=255)taACACCTGAAAAATAGGGATGTGCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACttt < 1:3965179/68‑1 (MQ=255)taACACCTGAAAAATAGGGATGTGCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACttt < 1:3881448/68‑1 (MQ=255) aaCACCTGAAAAATAGGGATGTGCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACtttt > 1:733189/1‑68 (MQ=255) acacCTGAAAAATAGGGATGTGCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACtttt < 1:6837622/67‑1 (MQ=255) acacCTGAAAAATAGGGATGTGCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACTTTTTa > 1:4207516/1‑69 (MQ=255) acCTGAAAAATAGGGATGTGCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACTTTTTagag > 1:3211356/1‑70 (MQ=255) acCTGAAAAATAGGGATGTGCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGc < 1:5489272/71‑1 (MQ=255) acCTGAAAAATAGGGATGTGCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGc < 1:1980636/71‑1 (MQ=255) aaaaaTAGGGATGTGCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAg > 1:4400514/1‑71 (MQ=255) aaaaTAGGGATGTGCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAgg > 1:3569970/1‑71 (MQ=255) aaaaTAGGGATGTGCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAg < 1:520048/70‑1 (MQ=255) aaaTAGGGATGTGCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAGCTTTTTa > 1:5312108/1‑60 (MQ=255) aaaTAGGGATGTGCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACttt < 1:1089218/57‑1 (MQ=255) aaaTAGGGATGTGCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACTTTTTa > 1:6432503/1‑60 (MQ=255) aaaTAGGGATGTGCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACTTTTTa > 1:1664475/1‑60 (MQ=255) aaaTAGGGATGTGCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACTTTTTa > 1:6855839/1‑60 (MQ=255) aaaTAGGGATGTGCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACTTTTTa > 1:6963721/1‑60 (MQ=255) aaaTAGGGATGTGCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACTTTTTa > 1:2494626/1‑60 (MQ=255) aaaTAGGGATGTGCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGc > 1:3736078/1‑71 (MQ=255) tgtgCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAg > 1:5047165/1‑71 (MQ=255) cATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAg > 1:6785196/1‑67 (MQ=255) cATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGta > 1:5923116/1‑69 (MQ=255) cATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGta > 1:3529991/1‑69 (MQ=255) cTTTATATATTCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGCaa < 1:501418/50‑1 (MQ=255) tttATATATTCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCa > 1:135712/1‑59 (MQ=255) tttATATATTCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCa > 1:536655/1‑59 (MQ=255) ttATATATTCTGAATATTCACACTCTTTACAGGAACttt > 1:2595865/1‑39 (MQ=255) ttATATATTCTGAATATTCACACTCTTTACAGGAACttt > 1:5862260/1‑39 (MQ=255) ttATATATTCTGAATATTCACACTCTTTACAGGAACttt > 1:3372556/1‑39 (MQ=255) atatatTCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGc > 1:6532249/1‑71 (MQ=255) atatatTCTGAATATTCACACTCATTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATg < 1:3820517/70‑1 (MQ=255) atatTCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAg < 1:1506449/58‑1 (MQ=255) atatTCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAg < 1:4534432/58‑1 (MQ=255) atTCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATa > 1:6699162/1‑44 (MQ=255) atTCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATa > 1:3836934/1‑44 (MQ=255) atTCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGa > 1:1804529/1‑71 (MQ=255) ttCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGCa < 1:3730795/40‑1 (MQ=255) ttCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGCa < 1:3574593/40‑1 (MQ=255) ttCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGa < 1:3868639/70‑1 (MQ=255) ttCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGa < 1:2220464/70‑1 (MQ=255) tGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGa < 1:6666070/51‑1 (MQ=255) tGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGa < 1:2326660/51‑1 (MQ=255) tGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGt < 1:3543094/58‑1 (MQ=255) tGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGa > 1:5137301/1‑67 (MQ=255) tGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGa > 1:3965227/1‑67 (MQ=255) tGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGa > 1:494497/1‑67 (MQ=255) tGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGa > 1:6205083/1‑67 (MQ=255) gagctgaataagtgtttttatggaacttTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACag > 1:1745471‑M2/29‑70 (MQ=255) aaTATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGt > 1:3611474/1‑51 (MQ=255) aaTATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGt > 1:4910684/1‑51 (MQ=255) aaTATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCg < 1:4171223/64‑1 (MQ=255) aaTATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACag < 1:292183/68‑1 (MQ=255) tatTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGAc > 1:6018501/1‑64 (MQ=255) tatTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGAc > 1:2627965/1‑64 (MQ=255) tatTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGAc > 1:6425607/1‑64 (MQ=255) tatTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGAc > 1:4040817/1‑64 (MQ=255) tatTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGAc > 1:6471362/1‑64 (MQ=255) tatTCAAACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGAAGCTCGAc > 1:3057613/1‑64 (MQ=255) atTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATc < 1:5285573/42‑1 (MQ=255) atTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATc < 1:1338157/42‑1 (MQ=255) atTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATc < 1:1769386/42‑1 (MQ=255) atTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATc < 1:2741690/42‑1 (MQ=255) atTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATc < 1:2366635/42‑1 (MQ=255) tCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAg > 1:3965975/1‑42 (MQ=255) cacaCTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAgtgt > 1:4351373/1‑71 (MQ=255) cacaCTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAgtgt > 1:3381411/1‑71 (MQ=255) cacaCTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAgtgt > 1:586989/1‑71 (MQ=255) cacaCTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAgtgt > 1:1622162/1‑71 (MQ=255) acacTCTTTACAGGAACTTTTTAGAGCAATAGGCCAt < 1:6077995/37‑1 (MQ=255) acacTCTTTACAGGAACTTTTTAGAGCAATAGGCCAt < 1:440543/37‑1 (MQ=255) acacTCTTTACAGGAACTTTTTAGAGCAATAGGCCAt < 1:5682198/37‑1 (MQ=255) acacTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTg > 1:5149387/1‑50 (MQ=255) acacTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAgtgt < 1:2608464/70‑1 (MQ=255) acacTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAgtgt < 1:6461679/70‑1 (MQ=255) acacTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAgtgt < 1:4071788/70‑1 (MQ=255) cacTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGt < 1:4429828/48‑1 (MQ=255) agtgtttttatggaacttTTTAGAGCAATAGGCCATCa > 1:325279‑M2/19‑38 (MQ=255) agtgtttttatggaacttTTTAGAGCAATAGGCCATCa > 1:317029‑M2/19‑38 (MQ=255) acTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGa < 1:1620466/40‑1 (MQ=255) acTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGa < 1:787167/40‑1 (MQ=255) acTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGa < 1:2256490/40‑1 (MQ=255) acTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGa < 1:4140876/40‑1 (MQ=255) acTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGa < 1:6567136/40‑1 (MQ=255) tctTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCtg > 1:822583/1‑70 (MQ=255) tttACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCtgaat > 1:1763509/1‑71 (MQ=255) tACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCtgaatg > 1:6262391/1‑70 (MQ=255) aCAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCtgaatga > 1:2306171/1‑70 (MQ=255) aCAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCtgaatga > 1:5748492/1‑70 (MQ=255) aCAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCtgaatga > 1:352375/1‑70 (MQ=255) cAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCtgaatga < 1:1386290/69‑1 (MQ=255) aGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGt < 1:6756289/38‑1 (MQ=255) aGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCtg < 1:1699396/63‑1 (MQ=255) gaacttTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCtgaa > 1:2119046‑M2/7‑63 (MQ=255) cttTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGAGAGAAGAAGTGTTCtg < 1:206584‑M2/55‑1 (MQ=255) tttAGAGCAATAGGCCATCAGGAGTATAGTGAAGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAAc > 1:1633273/1‑71 (MQ=255) | TAACACCTGAAAAATAGGGATGTGCATCTTTATATATTCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAAC > Exported/2159847‑2159984 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |