New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AP009048	270848 =	NA (NA)	5 (0.090)	4/92	NT	NA	coding (1022/1152 nt)	insI	IS30 transposase
	?	AP009048	270875 =	NA (NA)					coding (1049/1152 nt)	insI	IS30 transposase

GAGTCCTTGGCAGCGGGGAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAG  >  AP009048/270780‑270880                                                                     |                                 gagTCCTTGGCAGCGGGGAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACAt                                <  1:788648/71‑1 (MQ=34) gagTCCTTGGCAGCGGGGAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACAt                                <  1:2678015/71‑1 (MQ=34)      cTTGGCAGCGGGGAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGt                              <  1:3175164/68‑1 (MQ=35)       ttGGCAGCGGGGAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTg                          >  1:2105706/1‑71 (MQ=34)         ggCAGCGGGGAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGcc                        >  1:4020194/1‑71 (MQ=34)           cAGCGGGTAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCa                      <  1:1322935/71‑1 (MQ=21)           cAGCGGGGAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGccc                       >  1:3672219/1‑70 (MQ=35)           cAGCGGGGAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCa                      <  1:2056844/71‑1 (MQ=34)           cAGCGGGGAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCa                      <  1:950913/71‑1 (MQ=34)           cAGCGGGGAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCa                      <  1:3603960/71‑1 (MQ=34)            aGCGGGGAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCaa                     <  1:2902229/71‑1 (MQ=34)              cGGGGAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATATCTTGCCCAata                   >  1:2855632/1‑71 (MQ=21)               ggggAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAata                   >  1:741588/1‑70 (MQ=35)                 ggAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATAc                >  1:4654392/1‑71 (MQ=34)                  gAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGAc                                  >  1:1791038/1‑52 (MQ=35)                    aCAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGAc                                  >  1:1137/1‑50 (MQ=38)                    aCAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCa             <  1:982594/71‑1 (MQ=34)                           agaATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCaa                     >  1:1185155/1‑56 (MQ=35)                              aTACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAatat                  <  1:2933075/56‑1 (MQ=33)                               tACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAg  <  1:5081010/71‑1 (MQ=31)                               tACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGAAATGTCTTGCCCAATATTCTCAACATg        <  1:4733023/65‑1 (MQ=255)                                                                     |                                 GAGTCCTTGGCAGCGGGGAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAG  >  AP009048/270780‑270880

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.