| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 3167346 = | 66 (1.130) | 3 (0.060) | 3/90 | NT | 5.0% | intergenic (‑146/+59) | ygiU/ygiV | predicted cyanide hydratase/predicted transcriptional regulator |
| ? | AP009048 | 3167365 = | 55 (1.060) | intergenic (‑165/+40) | ygiU/ygiV | predicted cyanide hydratase/predicted transcriptional regulator | |||||
GTTAGATGTACGGAGATAGTGACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCATCACGCCAAC > AP009048/3167276‑3167414 | gttagATGTACGGAGATAGTGACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGt < 1:2590440/71‑1 (MQ=255)gaaacggatgtttatgtgccgttggcgtgatgcctgactccagcttcccttataaattcctgcttcaaact < 1:341665‑M1/1‑1 (MQ=255) aaacggatgtttatgtgccgttggcgtgatgcctgactccagcttcccttataaattcctgcttcaaacTg < 1:3700323‑M1/2‑1 (MQ=255) aaacggatgtttatgtgccgttggcgtgatgcctgactccagcttcccttataaattcctgcttcaaacTg < 1:3097446‑M1/2‑1 (MQ=255) aacggatgtttatgtgccgttggcgtgatgcctgactccagcttcccttataaattcctgcttcaaacTgg < 1:1207500‑M1/3‑1 (MQ=255) aacggatgtttatgtgccgttggcgtgatgcctgactccagcttcccttataaattcctgcttcaaacTgg < 1:2293700‑M1/3‑1 (MQ=255) agATGTACGGAGATAGTGACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGgc > 1:2788499/1‑71 (MQ=255) agATGTACGGAGATAGTGACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGgc > 1:4142013/1‑71 (MQ=255) agATGTACGGAGATAGTGACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGgc > 1:3554702/1‑71 (MQ=255) acggatgtttatgtgccgttggcgtgatgcctgactccagcttcccttataaattcctgcttcaaacTGgc < 1:5355766‑M1/4‑1 (MQ=255) acggatgtttatgtgccgttggcgtgatgcctgactccagcttcccttataaattcctgcttcaaacTGgc > 1:358222‑M1/68‑71 (MQ=255) aTGTACGGAGATAGTGACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGgcgc < 1:1585198/71‑1 (MQ=255) tGTACGGAGATAGTGACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCa < 1:3003153/71‑1 (MQ=255) gTACGGAGATAGTGACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCAt > 1:3419080/1‑71 (MQ=255) tACGGAGATAGTGACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCAt < 1:2458595/70‑1 (MQ=255) aCGGAGATAGTGACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCAt > 1:2699241/1‑69 (MQ=255) cGGAGATAGTGACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTg > 1:1951015/1‑62 (MQ=255) cGGAGATAGTGACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTg > 1:554588/1‑62 (MQ=255) cGGAGATAGTGACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTg > 1:987980/1‑62 (MQ=255) cGGAGATAGTGACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATtag < 1:4255942/71‑1 (MQ=255) cGGAGATAGTGACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATtag < 1:2816058/71‑1 (MQ=255) cGGAGATAGTGACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATta < 1:3477641/70‑1 (MQ=255) ggAGATAGTGACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATtagt < 1:2158566/71‑1 (MQ=255) gagaTAGTGACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATtagta < 1:2995599/71‑1 (MQ=255) gagaTAGTGACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATtag > 1:3662986/1‑69 (MQ=255) agaTAGTGACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCAt < 1:5290922/65‑1 (MQ=255) agaTAGTGACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATtagta > 1:4808600/1‑70 (MQ=255) gaTAGTGACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAgc > 1:16208/1‑71 (MQ=255) gaTAGTGACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAgc > 1:838831/1‑71 (MQ=255) gACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCAt > 1:5082898/1‑58 (MQ=255) gACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGt > 1:4385229/1‑71 (MQ=255) ttggcgtgatgcctgactccagcttcccttataaattcctgcttcaaact > 1:475778‑M1/50‑50 (MQ=255) cccACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAGAGTGGCGCATTAGTAGCGCCAGtt > 1:3606443/2‑71 (MQ=255) cacacaAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTg < 1:309238/71‑1 (MQ=255) acacaAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGa < 1:4118862/71‑1 (MQ=255) acaAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTg < 1:2319330/68‑1 (MQ=255) acaAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGa > 1:2271210/1‑69 (MQ=255) acaAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAg < 1:552662/71‑1 (MQ=255) acaAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAg > 1:1170508/1‑71 (MQ=255) tgatgcctgactccagcttcccttataaattcctgcttcaaacTGGCGCATTAGTAGCGCCAGTTTg > 1:3400709‑M1/44‑67 (MQ=255) aaaaCGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGaa > 1:4228301/1‑68 (MQ=255) aaaaCGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAg > 1:3917597/1‑69 (MQ=255) tgcctgactccagcttcccttataaattcctgcttcaaacTGgcgc > 1:4922370‑M1/41‑46 (MQ=255) aaCGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAgg < 1:3672152/71‑1 (MQ=255) aaCGTATTCTTTAAGGAAAGTGATTGACAATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAg > 1:790293/1‑70 (MQ=255) gcctgactccagcttcccttataaattcctgcttcaaacTGGCGCATTAGTAGCGcc > 1:2735770‑M1/40‑57 (MQ=255) ctgactccagcttcccttataaattcctgcttcaaacTGGCGCATTAGTAGCGCCAg < 1:998656‑M1/20‑1 (MQ=255) tATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAAtt < 1:2762853/71‑1 (MQ=255) aTTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAAtt > 1:4230957/1‑70 (MQ=255) ttCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGgc < 1:4210403/38‑1 (MQ=255) ttCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGt > 1:4976218/1‑55 (MQ=255) ttCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTta < 1:2591847/71‑1 (MQ=255) tCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAgcg > 1:1300511/1‑49 (MQ=255) tCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTta > 1:5251713/1‑70 (MQ=255) tccagcttcccttataaattcctgcttcaaacTGgc > 1:4674117‑M1/33‑36 (MQ=255) cTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTtat < 1:4927127/70‑1 (MQ=255) cTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTtat < 1:2145229/70‑1 (MQ=255) tttAAGGAAAGTGATTGACCATATAAGAAAGTGgc > 1:671625/1‑35 (MQ=255) ttAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAg > 1:5090646/1‑71 (MQ=255) cagcttcccttataaattcctgcttcaaacTGgcgc < 1:3817209‑M1/6‑1 (MQ=255) tAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTta < 1:1235803/66‑1 (MQ=255) tAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATaa < 1:663185/69‑1 (MQ=255) gAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTtat < 1:737885/63‑1 (MQ=255) aaGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAg < 1:3085097/69‑1 (MQ=255) aaGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCt > 1:445527/1‑71 (MQ=255) aGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAAt < 1:2572962/56‑1 (MQ=255) aGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTg < 1:601836/71‑1 (MQ=255) aGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTg < 1:1576475/71‑1 (MQ=255) gTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTgg < 1:3772377/71‑1 (MQ=255) aTTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGt < 1:2208220/71‑1 (MQ=255) aTTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGt < 1:546595/71‑1 (MQ=255) ttGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTg > 1:2742611/1‑66 (MQ=255) ttGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTc < 1:4583218/71‑1 (MQ=255) ttGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTc < 1:1865626/71‑1 (MQ=255) gACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTtat < 1:904014/53‑1 (MQ=255) aCCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGt < 1:2739252/67‑1 (MQ=255) ccATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGc < 1:1672160/71‑1 (MQ=255) cATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCa > 1:5353139/1‑71 (MQ=255) cATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCa > 1:3819615/1‑71 (MQ=255) atatAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCAt < 1:4740906/71‑1 (MQ=255) tataAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTta > 1:2156401/1‑47 (MQ=255) ataAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCATCa > 1:4034454/1‑71 (MQ=255) ataAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCATCa > 1:4564028/1‑71 (MQ=255) ataAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCATCa > 1:1311352/1‑71 (MQ=255) taAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTg > 1:382743/1‑57 (MQ=255) taAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCATCAc > 1:3586168/1‑71 (MQ=255) aaGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATaa > 1:540991/1‑47 (MQ=255) aaGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATaa > 1:276303/1‑47 (MQ=255) aGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGGTGGAGTCAGGCATCACGc > 1:1522509/1‑71 (MQ=255) gAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCATCACGc > 1:5081073/1‑70 (MQ=255) aaGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCATCACGCCaa > 1:4536130/1‑71 (MQ=255) aaGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCATCACGCCaa < 1:3642322/71‑1 (MQ=255) aaGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCATCACGCCaa < 1:3009741/71‑1 (MQ=255) aGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCATCACGCCAAc > 1:1224890/1‑71 (MQ=255) gTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGc < 1:762408/48‑1 (MQ=255) | GTTAGATGTACGGAGATAGTGACCACACAAAACGTATTCTTTAAGGAAAGTGATTGACCATATAAGAAAGTGGCGCATTAGTAGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCATCACGCCAAC > AP009048/3167276‑3167414 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |