| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 1383523 = | 33 (0.560) | 3 (0.060) | 3/90 | NT | 8.6% | coding (21/114 nt) | ymjB | hypothetical protein |
| ? | AP009048 | 1383562 = | 35 (0.680) | coding (60/114 nt) | ymjB | hypothetical protein | |||||
CACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGC > AP009048/1383494‑1383631 | cACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGa < 1:3115470/71‑1 (MQ=255) aCGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGat < 1:953973/71‑1 (MQ=255) aCGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGa > 1:1567954/1‑70 (MQ=255) aCGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGa > 1:1983822/1‑70 (MQ=255) gAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCAtttt < 1:5282694/66‑1 (MQ=255) ttAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGata < 1:1775217/67‑1 (MQ=255) gaaatgacatttcgtcatatcaaaatgaatagtgatattttctcctgcatgataatcatttTGAAATGaca > 1:2018818‑M2/62‑70 (MQ=255) aGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTg < 1:4066575/62‑1 (MQ=255) aGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGatat > 1:1046565/1‑66 (MQ=255) aGTGGTCCGTGCGGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACg > 1:4036453/1‑70 (MQ=255) gTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGaa < 1:4788736/71‑1 (MQ=255) gTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGa < 1:2862509/70‑1 (MQ=255) ccGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGa > 1:990464/1‑62 (MQ=255) ccGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGt > 1:4717940/1‑70 (MQ=255) cGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTc < 1:2049172/70‑1 (MQ=255) tcTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTg < 1:4072749/51‑1 (MQ=255) tgtcatttcaAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTc > 1:2018818‑M1/11‑71 (MQ=255) tGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTg < 1:2661620/71‑1 (MQ=255) gCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGata > 1:2099596/1‑49 (MQ=255) cGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGa < 1:3504112/70‑1 (MQ=255) ttAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTg < 1:4882837/43‑1 (MQ=255) ttAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTg < 1:4879121/67‑1 (MQ=255) tAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATg > 1:750416/1‑69 (MQ=255) AAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATg < 1:2172224‑M1/68‑1 (MQ=255) AAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATg < 1:1724544‑M1/68‑1 (MQ=255) AAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATg < 1:5144547‑M1/68‑1 (MQ=255) AAATGATTATCAT‑CAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAg < 1:3495387‑M1/70‑1 (MQ=255) AATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAg < 1:1608054‑M1/70‑1 (MQ=255) atgaatagtgatattttctcctgcatgataatcatttTGATATGACGAAATGTCATTTCTTTGa > 1:2889983‑M2/38‑64 (MQ=255) ATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGatat > 1:5079294‑M1/1‑43 (MQ=255) ATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGa < 1:3536996‑M1/70‑1 (MQ=255) ATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGa < 1:1278264‑M1/70‑1 (MQ=255) ATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGa < 1:4112188‑M1/70‑1 (MQ=255) ATGATTATCATGCAAGAGAAAATATCACTATTCATTTTGATATGACGa > 1:1253264‑M1/1‑48 (MQ=255) TGATTATCATGCAGGAGAAAATATCACTATTCATTTTGCTATGACGAAATGTCATTTCTTTGATGCAGaa > 1:4923611‑M1/1‑70 (MQ=255) ttATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACgg < 1:4059860/71‑1 (MQ=255) ttATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACg < 1:4401901/70‑1 (MQ=255) aTCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGa < 1:3143329/70‑1 (MQ=255) tCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGaaa < 1:3740144/71‑1 (MQ=255) tCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGaaa < 1:3883596/71‑1 (MQ=255) tCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGaa < 1:5158461/70‑1 (MQ=255) cATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGaaa > 1:2107691/1‑70 (MQ=255) aTGCAGGAGAAAATATCACTATTCATTTTGATATGAc > 1:5199617/1‑37 (MQ=255) aTGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAAt < 1:1985513/70‑1 (MQ=255) aTGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAAt < 1:4394949/70‑1 (MQ=255) tGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAg > 1:4038885/1‑71 (MQ=255) cAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGc < 1:3961655/70‑1 (MQ=255) attttctcctgcatgataatcatttTGATATGACGAAATGTCATTTCttt < 1:4615274‑M2/25‑1 (MQ=255) ggAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAAt < 1:4339374/71‑1 (MQ=255) gagaAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATg < 1:2131766/51‑1 (MQ=255) gaAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCg > 1:149500/1‑71 (MQ=255) gaAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCg > 1:601795/1‑71 (MQ=255) aaaaTATCACTATTCATTTTGATATGACGAAATGTCa < 1:608286/37‑1 (MQ=255) aaaTATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGc > 1:3354709/1‑70 (MQ=255) aaTATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTa < 1:1254683/71‑1 (MQ=255) tatCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTaaa > 1:652691/1‑71 (MQ=255) atCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTaaa > 1:4088696/1‑70 (MQ=255) tCACTATTCATTTTGATATGACGAAATGTCATTTCttt < 1:2730053/38‑1 (MQ=255) tCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAAt < 1:3909062/70‑1 (MQ=255) cACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATa > 1:3823360/1‑70 (MQ=255) aCTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACa < 1:115566/71‑1 (MQ=255) cTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAg < 1:939408/71‑1 (MQ=255) cTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAg < 1:211677/71‑1 (MQ=255) cTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAg < 1:1828055/71‑1 (MQ=255) ttCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAgggg < 1:1042857/71‑1 (MQ=255) ttCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAggg < 1:923714/70‑1 (MQ=255) tttTGATATGACGAAATGTCATTTGTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATTCAg < 1:3991950‑M2/61‑1 (MQ=255) tttTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAg < 1:820516‑M2/68‑1 (MQ=255) tTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATa > 1:2914178‑M2/2‑44 (MQ=255) tTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATa > 1:4866079‑M2/2‑59 (MQ=255) tGATATGACGAAATGTCATTTCTTTGATGCAGaaa > 1:3080405/1‑35 (MQ=255) tGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGc < 1:1906043/70‑1 (MQ=255) | CACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGC > AP009048/1383494‑1383631 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |