| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 2214850 | 49 (0.840) | 3 (0.050) | 3/96 | NT | 5.7% | coding (292/462 nt) | yehR | conserved hypothetical protein |
| ? | AP009048 | = 2214884 | 53 (0.960) | coding (326/462 nt) | yehR | conserved hypothetical protein | |||||
AAAACATCGCGGGTGTTGAAGAAAAATTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAGGAATCAACGTTTCTGCTGAAGATGC > AP009048/2214815‑2214950 | aaaaCATCGCGGGTGTTGAAGAAAAATTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGa > 1:3044703/1‑70 (MQ=255) aaaCATCGCGGGTGTTGAAGAAAAATTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGAta < 1:3278501‑M2/71‑3 (MQ=255) aaaCATCGCGGGTGTTGAAGAAAAATTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGAta > 1:3691559‑M2/1‑69 (MQ=255) aaaCATCGCGGGTGTTGAAGAAAAATTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGAta < 1:1649022‑M2/71‑3 (MQ=255) aCATCGCGGGTGTTGAAGAAAAATTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGAt < 1:1308592‑M2/68‑2 (MQ=255) cATCGCGGGTGTTGAAGAAAAATTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGAtat < 1:4396794‑M2/69‑4 (MQ=255) gcgGGTGTTGAAGAAAAATTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGaaa < 1:1430439/70‑1 (MQ=255) cgGGTGTTGAAGAAAAATTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGaaaa < 1:2144773/70‑1 (MQ=255) tgtTGAAGAAAAATTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGa < 1:2646785/63‑1 (MQ=255) ttGAAGAAAAATTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTg < 1:1845296/68‑1 (MQ=255) ttGAAGAAAAATTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGa < 1:769727/70‑1 (MQ=255) gaagaaAAATTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGAt > 1:5219208‑M2/1‑53 (MQ=255) aagaaAAATTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGAttt < 1:4008044/70‑1 (MQ=255) aagaaAAATTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGAttt < 1:1280371/70‑1 (MQ=255) aagaaAAATTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGAttt < 1:3310618/70‑1 (MQ=255) aagaaAAATTAACCGATACCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGAttt > 1:4998973/1‑70 (MQ=255) gaaAAATTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGa < 1:2919817/50‑1 (MQ=255) gaaAAATTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTa > 1:3824241/1‑70 (MQ=255) aaaaaTTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTa > 1:1494269/1‑69 (MQ=255) aaaaTTAATCTATACCGATAACTACGCGCAGGAAAACGTGACTATCGATATGGaaa < 1:4540974/56‑1 (MQ=255) aaaaTTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTg > 1:2657383/1‑61 (MQ=255) aaaTTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGaaaaa < 1:4146454/57‑1 (MQ=255) aaaTTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTg > 1:3944032/1‑60 (MQ=255) aaaTTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGc > 1:1082367/1‑71 (MQ=255) aaaTTAACCTATACCGATACCTACGCCCAGGAAAACGTGACTATCGAta < 1:4833084‑M2/49‑3 (MQ=255) aaTTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGcc < 1:2726759/71‑1 (MQ=255) aaCCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTg < 1:996812/70‑1 (MQ=255) aaCCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTg < 1:5013654/70‑1 (MQ=255) aCCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGc < 1:4440456/70‑1 (MQ=255) tataCCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTaa < 1:1264116/59‑1 (MQ=255) ataCCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTaa < 1:294551/58‑1 (MQ=255) ataCCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTaa < 1:3019201/58‑1 (MQ=255) taCCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAg < 1:1974424/47‑1 (MQ=255) taCCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGc > 1:4532099/1‑65 (MQ=255) taCCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAggg < 1:3592080/69‑1 (MQ=255) ccGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGAtttt > 1:3667068/1‑53 (MQ=255) gATACCTACGCGCAGGAAAACGTGACTATCGATATGGaaaaa > 1:2056887/1‑42 (MQ=255) gATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGa > 1:871607/1‑47 (MQ=255) gATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGa > 1:4640423/1‑47 (MQ=255) aCCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAg > 1:515887/1‑70 (MQ=255) ccTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAgg < 1:4252703/70‑1 (MQ=255) tACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAg < 1:720038/49‑1 (MQ=255) aCGCGCAGGAAAACGTGACTATCGAtataggttaatttttcttcaacacccgcgatgtttt < 1:3864884‑M2/61‑37 (MQ=255) cgcgCAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAGGAATc > 1:2029941/1‑70 (MQ=255) cgcgCAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAGGAATc < 1:2370920/70‑1 (MQ=255) gcgcAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAggg < 1:2625167/56‑1 (MQ=255) cgcAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAgg > 1:2470947/1‑54 (MQ=255) cgcAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAGGAATCAAc > 1:2279437/1‑71 (MQ=255) gcAGGAAAACGTGACTATCGAtataggttaatttttc < 1:4258657‑M2/37‑17 (MQ=255) cAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAGGAATCAACGt > 1:2619693/1‑71 (MQ=255) cAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAGGAATCAACGt < 1:854711/71‑1 (MQ=255) cAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAGGAATCAACGt < 1:1801167/71‑1 (MQ=255) ggAAAACGTGACTATCGATATGGAAAAAGTGGATTTTa > 1:4919976/1‑38 (MQ=255) ggAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAGGAATCAACg > 1:1003615/1‑68 (MQ=255) ggAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAGGAATCAACGttt > 1:4732989/1‑71 (MQ=255) gAAAACGTGACTATCGAtataggttaatttttcttcaacacccgcgat < 1:4247205‑M2/48‑32 (MQ=255) gAAAACGTGACTATCGATATGGAAAAAGTGGATTTTa < 1:751716/37‑1 (MQ=255) gAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTg < 1:4892150/45‑1 (MQ=255) aaaaCGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAgg > 1:317253/1‑48 (MQ=255) aaaCGTGACTATCGATATGGAAAAAGTGGATTTTaaa > 1:2394221/1‑37 (MQ=255) aaaCGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAGGAATCAACGTTTctg > 1:4461320/1‑71 (MQ=255) aaCGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAgg > 1:2131308/1‑46 (MQ=255) aCGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAGGAATCAACGTTTctgct > 1:5208124/1‑71 (MQ=255) cGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAGGAATCAACGTTTctgctg < 1:1354105/71‑1 (MQ=255) aCTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTa > 1:1269602/1‑43 (MQ=255) aCTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAGGAATCAACGTTTCTGCTGAAg < 1:2916021/70‑1 (MQ=255) aCTATCGATAAGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTa > 1:1275915/1‑43 (MQ=255) cTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAGGAATCAACGTTTctg > 1:5090217/1‑63 (MQ=255) tCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAGGAATCAACGTTTCTGCTGAAGATGc > 1:3942621/1‑70 (MQ=255) tCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAGGAATCAACGTTTCTGCTGAAGATGc > 1:1533081/1‑70 (MQ=255) | AAAACATCGCGGGTGTTGAAGAAAAATTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAGGAATCAACGTTTCTGCTGAAGATGC > AP009048/2214815‑2214950 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |