| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | BS168_reference_genome | 3486759 = | 0 (0.000) | 22 (0.020) +ACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAG |
16/154 | 0.9 | 94.8% | intergenic (+1/+48) | araR/yvbT | transcriptional repressor of the ara regulon (LacI family)/putative alkanal monooxygenase |
| ? | pSIJ663_pHT315_araE_xy | 9781 = | 4 (0.000) | intergenic (+5050/–) | ampR/– | –/– | |||||
ACGAAATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < BS168_reference_genome/3486895‑3486759‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGTAT > pSIJ663_pHT315_araE_xy/9781‑9915 |||||||||||||||||||||||||||||||||||||||||||||||||| ACGAAATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTAC < 5:318638/139‑1 CGAAATTATGTTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACT < 3:373994/139‑1 GAAATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTG < 6:255371/139‑1 AATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGACTGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGC < 4:8921/138‑1 TGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAA < 2:75578/138‑1 AACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACG > 8:172033/1‑139 ACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGT < 4:332582/139‑1 AGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGAC < 1:349264/139‑1 AAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACAC < 8:183531/139‑1 TTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTT > 3:92363/1‑139 TTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTT > 3:132843/1‑139 TTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTT > 4:175687/1‑139 ACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAA < 7:74777/139‑1 ACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAA < 1:17848/139‑1 ACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAA < 7:80435/139‑1 GCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTAGTGCGTCAATACACGTTGACACTCTTTTGAAAGTGT > 4:94334/1‑139 GCAGACAGAATGCGTTCGGATGAAATCATCGCTGACGTTTGGAAAAACAGCTAACAGCTATAAAAAAAGCACTGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGT < 6:354474/139‑1 AGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCAATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGT < 1:268352/139‑1 GACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTT < 5:198417/139‑1 GACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTT < 1:247793/139‑1 AATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAAT > 6:115227/1‑138 TGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGC > 8:2531/1‑97 TGCGATCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGC < 7:2531/97‑1 CGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTAT > 3:191296/1‑137 CGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGGCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCA < 7:31018/139‑1 TTCGTTTGAAATCATCGCTGACGTTTGGAAAATCAGATAACAGCTATAAAAAAAGCAAAGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACAGTCTTTTGATAGTGGGTTATATTATCA > 4:270993/1‑137 TTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGT < 5:115227/139‑1 ATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGAC < 3:87412/96‑1 ATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGAC > 4:87412/1‑96 CGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAG > 7:124251/1‑138 AAAACAGAAAACATCTATAAAAAAAGCATTGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG < 4:184811/139‑1 AAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑A < 4:92363/139‑1 AACATAAAACAGCTAAAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGATTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGTAAGTATTTGAAAATGAAG‑AA < 8:142428/139‑1 AACAGATAACAGATAAAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTATTTTGAAAGTGTTTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AA < 7:260798/139‑1 ACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGAGACATCAAAGCAAGAATTTGAAAATGAAG‑AA > 4:295280/1‑138 CAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACTTTGCTTTTTACTGCGTAAATACAGGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAAC < 4:292806/139‑1 CTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTC > 5:76889/1‑138 CTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTC > 2:126274/1‑138 CTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGCAAGTATTTGAAAATGAAG‑AATACTCCAACTC > 8:124923/1‑138 TAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTAAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATT < 3:175687/139‑1 AAAAGCAATGTAGCGGGGACACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAA < 4:128136/139‑1 AAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAAC > 6:14307/1‑139 AGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACC > 5:366038/1‑138 AGCAATGTAGCGGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACC > 1:356400/1‑138 GGGGAGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGT < 7:172033/139‑1 GGGGAGAACCATACATTGCTTTTTACTGCGTAAATACACTTTGACACTATTTTGAAAGTGTGTTAAATTATCAGTGAAATGAAAGGAATTATTTTAAAATGAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGT < 7:124923/139‑1 AGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAAC > 1:163129/1‑111 AGACCCATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAAC < 2:163129/111‑1 CATACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAG < 8:204620/139‑1 TACATTGCTTTTTACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGC > 4:172455/1‑138 CGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAATGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACATGAAGCCATTCAATGGGATTTGT > 6:325302/1‑138 CGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAATGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGT > 6:332237/1‑138 CGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGT > 5:319559/1‑138 CGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATG > 6:211048/1‑73 CGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATG < 5:211048/73‑1 TACACGTTTACAATCTTTTGAATGTTTTTTAAATTATCAGTGACATGAAAGTAAGTATTTCAAAATCAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTG < 2:356400/139‑1 ccgGTTGACACTCTTTTGAAAGTTGGTTAAATTATCAGGTACATGAACGCAAGTATTTGAAAATGACG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGAT < 3:310072/136‑1 CGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGATG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCT > 5:224347/1‑139 TGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGAT > 8:4677/1‑134 TGACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGAT < 7:4677/134‑1 GACACTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCCACTCAATTAGAACCAAATGTTCCTGTACCAAGAAGCCAGTCAAGGGGATTTGTCATGTTGATCTCATG > 4:293749/1‑139 CTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTG > 7:204811/1‑127 CTCTTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTG < 8:204811/127‑1 TTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCG > 7:209149/1‑139 TTTTGAAAGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCG > 5:69019/1‑139 AGTGTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTG < 8:124251/139‑1 GTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGATAATGAAG‑AATACTCAAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGTGCTTGGCG > 3:116202/1‑139 GTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGACG‑AATACTCCAACTCAATTAGAACCAAATCTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCG > 2:305374/1‑139 GTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGTCG > 7:190603/1‑139 GTGTTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCG > 6:235387/1‑139 TTAAATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGC < 7:203028/138‑1 TTAAATTATCAGTCAAATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGC < 4:191296/138‑1 AATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAGCAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTA < 1:126274/139‑1 AATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTA < 8:190603/138‑1 AATTATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGAATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTA < 4:132843/138‑1 ATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGT < 8:209149/138‑1 ATCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGT < 6:76889/138‑1 TCAGTGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATACAATGGGATTTGTCATTTAGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGTAT > 1:284459/1‑139 |||||||||||||||||||||||||||||||||||||||||||||||||| ACGAAATTATGGTTAACTCAGAAACCTTTGAACACGCAGACAGAATGCGTTCGTTTGAAATCATCGCTGACGTTTGGAAAAACAGATAACAGCTATAAAAAAAGCAATGTAGCGGGGAGACCCATACATTGCTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < BS168_reference_genome/3486895‑3486759‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACATGAAAGGAAGTATTTGAAAATGAAG‑AATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGTAT > pSIJ663_pHT315_araE_xy/9781‑9915 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |