| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | BS168_reference_genome | 3484069 = | 163 (1.250) | 23 (0.310) +AAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGT |
17/184 | 1.1 | 25.2% | intergenic (‑295/+3) | cggR/araE | transcriptional regulator of gapA/arabinose‑related compounds permease |
| ? | Exported | 6207 = | 25 (0.350) | coding (320/324 nt) | lacZalpha | /vntifkey=4 | |||||
CCCGCACCGATCGCCCTTCCCAACAGTTGCGCAGCCTGAATGGCGAATGGCGCCTGATGCGGTATTTTCTCCTTACGCATCTGTGCGGTATTTCACACCGCATATGGTGCACTCTCAGTACAATCTGCTCTGATGCCGCATAGTTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATCCGCTTACAGACAAGCTGTGACCGTCTCCGGGAGCTGCATGTGTCAGAGGTTTTCACCGTCATCAC > Exported/6069‑6344 | cccGCACCGATCGCCCTTCCCAACAGTTGCGCAGCCTGAATGGCGAATGGCGCCTGATGCGGTATTTTCTCCTTACGCATCTGTGCGGTATTTCACACCGCATATGGTGCACTCTCAGTACAATCTGCTCTGATGCCGc < 2:34988/139‑1 (MQ=255) tgcggtgattaacatcctttgtttcctgtttgtcgttacgatctgtccagaaacgaataacaaatcgctcgaggaaattgaaaagctttggataaaatgaaaaaaagcgcagctgaaatagctgcgcttttttgtgtc < 8:415798‑M2/1‑1 (MQ=255) tgcggtgattaacatcctttgtttcctgtttgtcgttacgatctgtccagaaacgaagaacaaatcgctcgaggaaattgaaaagctttgtataaaatgaaaaaaagcgcagctgaaatagctgcgcttttttgtgtc < 8:62214‑M2/1‑1 (MQ=255) tgcggtgattaacatcctttgtttcctgtttgtcgttacgatctgtccagaaacgaagaacaaatcgctcgaggaaattgaaaagctttggataaaatgaaaaaaagcgcagctgaaatagctgcgcttttttgtgtc > 6:361565‑M2/138‑138 (MQ=255) tgcggtgattaacatcctttgtttcctgtttgtcgttacgatctgtccagaaacgaagaacaaatcgctcgaggaaattgaaaagctttggataaaatgaaaaaaagcgcagctgaaatagctgcgcttttttgtgtc < 5:308900‑M2/1‑1 (MQ=255) tgcggtgattaacatcctttgtttcctgtttgtcgttacgatctgtccagaaacgaagaacaaatcgctcgaggaaattgaaaagctttggataaaatgaaaaaaagcgcagctgaaatagctgcgcttttttgtgtCa > 7:457592‑M2/138‑139 (MQ=255) aCCGATCGCCCTTCCCAACAGTTGCGCAGCCTGAATGGCGAATGGCGCCTGATGCGGTATTTTCTCCTTACGCATCTGTGCGGTATTTCACACCGCATATGGTGCACTCTCAGTACAATCTGCTCTGATGCCGCATAGt < 4:75479/139‑1 (MQ=255) tttgtttcctgtttgtcgttacgatctgtccagaaacgaagaacaaatcgctcgaggaaattgaaaagctttggataaaatgaaaaaaagcgcagctgaaatagctgcgcttttttgtgtCATAATTAAGCCAGCCCCg > 3:135289‑M2/121‑139 (MQ=255) tcctgtttgtcgttacgatctgtccagaaacgaagaacaaatcgctcgaggaaattgaaaagctttggataaaatgaaaaaaagcgcagctgaaatagctgcgcttttttgtgtCATAATTAAGCCAGCCCCGCCAccc > 2:25817‑M2/115‑139 (MQ=255) ttGCGCAGCCTGAATGGCGAATGGCGCCTGATGCGGTATTTTCTCCTTACGCATCTGTGCGGTATTTCACACCGCATATGGTGCACTCTCAGTACAATCTGCTCTGATGCCGCATAGTTAAGCCAGCCCCGACACCCGc < 7:176972/139‑1 (MQ=255) tgtttgtcgttacgatctgtccagaaacgaagaacaaatcgctcgaggaaattgaaaagctttggataaaatgaaaaaaagcgcagctgaaatagctgcgcttttttgtgtCATAATTAAGCCAGCCCCGACACCCGcc > 4:361254‑M2/112‑139 (MQ=255) cAGCCTGAATGGCGAATGGCGCCTGATGCGGTATTTTCTCCTTACGCATCTGTGCGGTATTTCACACCGCATATGGTGCACTCTCAGTACAATCTGCTCTGATGCCGCATAGTTAAGCCAGCCCCGACACCCGc > 7:437792/1‑134 (MQ=255) cAGCCTGAATGGCGAATGGCGCCTGATGCGGTATTTTCTCCTTACGCATCTGTGCGGTATTTCACACCGCATATGGTGCACTCTCAGTACAATCTGCTCTGATGCCGCATAGTTAAGCCAGCCCCGACACCCGc < 8:437792/134‑1 (MQ=255) gtcgttacgatctgtccagaaacgaagaacaaatcgctcgaggaaattgaaaagctttggataaaatgaaaaaaagcgcagctgaaatagctgcgcttatttgtgtCATAATTAAGCCAGCCCCGACACCCGCCAacac > 3:100836‑M2/107‑139 (MQ=255) tccagaaacgaagaacaaatcgctcgaggaaattgaaaagctttggataaaatgaaaaaaagcgcagctgaaatagctgcgcttttttgtgtCATAATTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGccc > 3:530988‑M2/93‑139 (MQ=255) cccagaaacgaataacaaatcgctcgtggaaaatgaatagctttggataaaatcaaaaaaagcgcagctgaaatagctgcgcttttttgtgtCATAATTAAGCCAGCCCCGACACCCGCCAACACCCGCTGAc < 3:306702‑M2/41‑1 (MQ=255) aagaacaaatcgctcgaggaaattgaaaagctttggataaaatgaaaaaaagcgcagctgaaatagctgcgcttttttgtgtCATAATTAAGCCAGCCCCGACACCCGCCAACACCCGCTGCCGCGCCCTGACCGGCtt > 8:223888‑M2/83‑139 (MQ=255) aagaacaaatcgctcgaggaaattgaaaagctttggataaaatgaaaaaaagcgcagctgaaatagctgcgcttttttgtgtCATAATTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCtt > 8:576697‑M2/83‑139 (MQ=255) aagaacaaatcgctcgaggaaattgaaaagctttggataaaatgaaaaaaagcgcagctgaaatagctgcgcttttttgtgtCATAATTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCAGACCggcat > 2:275678‑M2/83‑137 (MQ=255) tcgctcgaggaaattgaaaagctttggataaaatgaaaaaaagcgcagctgaaatagctgcgcttttttgtgtCATAATTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTcc > 1:154503‑M2/74‑139 (MQ=255) tcgaggaaattgaaaagctttggataaaatgaaaaaaagcgcagctgaaatagctgcgcttttttgtgtCATAATTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCgg > 5:247003‑M2/70‑138 (MQ=255) ttACGCATCTGTGCGGTATTTCACACCGCATATGGTGCACTCTCAGTACAATCTGCTCTGATGCCGCATAGTTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATc > 2:334128/1‑139 (MQ=255) ttgaaaagctttgtataaaatgaaaaaaagcgcagctgaaatagctgcgcttttttgtgtCATAATTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATCCGCTTa < 5:560061‑M2/79‑1 (MQ=255) ttgaaaagctttggataaaatgaaaaaaagcgcagctgaaatagctgcgcttttttgtgtCATAATTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATCCGCtt > 1:244990‑M2/61‑138 (MQ=255) aaagctttggataaaatgaaaaaaagcgcagctgaaatagctgcgcttttttgtgtCATAATTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATCCGCTTACAGa < 4:530988‑M2/83‑1 (MQ=255) aagctttgtaaaaaattaaaaaacgcgcagctgaaatagctgcgcttttttgtgtCATAATTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATCCGCTTACAGAc < 1:275678‑M2/84‑1 (MQ=255) taaaatgaaaaaaagcgcagctgaaatagctgcgcttttttgtgtCATAATTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATCCGCTTACAGACAAGCTGTGa < 2:244990‑M2/93‑1 (MQ=255) taaaatgaaaaaaagcgcagctgaaatagctgcgcttttttgtgtCATAATTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATCCGCTTACAGACAAGCTGTGa < 4:100836‑M2/93‑1 (MQ=255) taaaatgaaaaaaagcgcagctgaaatagctgcgcttttttgtgtCATAATTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATCCGCTTACAGACAAGCTGTGAc < 4:510681‑M2/94‑1 (MQ=255) cATATGGTGCACTCTCGGTACAATCTGCTCTGATGCCGCATAGTTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATCCGCTTACAGACAAGCTGTGACCGTCTcc > 1:104593/1‑139 (MQ=255) cATATGGTGCACTCTCAGTACAATCTGCTCTGATGCCGc < 8:381743/39‑1 (MQ=255) cATATGGTGCACTCTCAGTACAATCTGCTCTGATGCCGc > 7:381743/1‑39 (MQ=255) cATATGGTGCACTCTCAGTACAATCTGCTCTGATGCCGCATAGTTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCAACCGGCATCCGCTTACAGACAAGCTGTGCCCGTCTcc > 6:209393/1‑139 (MQ=255) gCACTCTCAGTACAATCTGCTCTGATGCCGCATAGTTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATCCGCTTACAGACa > 7:79828/1‑115 (MQ=255) gCACTCTCAGTACAATCTGCTCTGATGCCGCATAGTTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATCCGCTTACAGACa < 8:79828/115‑1 (MQ=255) gTACAATCTGCTCTGATGCCGCATAGTTAAGCCAGCCCCGACCCCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTACCGGCATCCGCTTTCAGACAAGCTGTGAACGTCACCGGGAGCTGCATgggt > 6:222714/1‑137 (MQ=255) aTCTGCTCTGATGCCGCATAGTTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGa < 7:95463/66‑1 (MQ=255) aTCTGCTCTGATGCCGCATAGTTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGa > 8:95463/1‑66 (MQ=255) aTCTGCTCTGATGCCGCATAGTTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATCCGCTTACAGACAAGCTGTGACCGTCTCCGGGAGCTGCATGTGTCAGAGGt > 3:186886/1‑139 (MQ=255) tCTGCTCTGATGCCGCATAGTTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATCCGCTTACAGACAAGCTGTGAcc < 4:552540/110‑1 (MQ=255) tCTGCTCTGATGCCGCATAGTTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTACCGGCATCCGCTTACAGACAAGCTGTGAcc > 3:552540/1‑110 (MQ=255) gCTCTGATGCCGCATAGTTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTg > 4:312177/1‑61 (MQ=255) gCTCTGATGCCGCATAGTTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTg < 3:312177/61‑1 (MQ=255) tctGATGCCGCATAGTTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTTTCTGCTACCCGCAACCGCTTACAGACAAGCTGTGACCGTCGCCGGGAGCAGCATGTGTCAGAGGTTTTCaa > 3:409473/1‑138 (MQ=255) tctGATGCCGCATAGTTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATCCGCTTACAGACAAGCTGTGACCGTCTCCGGGAg > 2:303897/1‑116 (MQ=255) tctGATGCCGCATAGTTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATCCGCTTACAGACAAGCTGTGACCGTCTCCGGGAg < 1:303897/116‑1 (MQ=255) tGCCGCATAGTTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATCCGCTTACAGACAAGCTGTGACCGTCTCCggg < 6:513467/109‑1 (MQ=255) tGCCGCATAGTTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATCCGCTTACAGACAAGCTGTGACCGTCTCCggg > 5:513467/1‑109 (MQ=255) tcATAATTAAGCCAGCCCCGACCCCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCCGCATCCGCTTACAGACAAGCTGTGACCGTCTCCGGGGGCTGCATGTGTCAGAGGTTTTGACCGtcatccc > 3:333158/2‑137 (MQ=255) tcATAATTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATc > 7:618/2‑74 (MQ=255) tcATAATTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATc < 8:618/73‑1 (MQ=255) | CCCGCACCGATCGCCCTTCCCAACAGTTGCGCAGCCTGAATGGCGAATGGCGCCTGATGCGGTATTTTCTCCTTACGCATCTGTGCGGTATTTCACACCGCATATGGTGCACTCTCAGTACAATCTGCTCTGATGCCGCATAGTTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATCCGCTTACAGACAAGCTGTGACCGTCTCCGGGAGCTGCATGTGTCAGAGGTTTTCACCGTCATCAC > Exported/6069‑6344 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |