| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | pSIJ663_pHT315_araE_xy | = 5551 | 66 (0.010) | 10195 (1.080) | 223/242 | 0.0 | 99.4% | intergenic (+820/–) | ampR/– | –/– |
| ? | pSIJ663_pHT315_araE_xy | 9889 = | NA (NA) | intergenic (+5158/–) | ampR/– | –/– | |||||
Only 100 of 10712 total aligned reads displayed.
TTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > pSIJ663_pHT315_araE_xy/5409‑5551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgtGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTCAAGCATTATGATTGGAGGAGTT > pSIJ663_pHT315_araE_xy/9889‑10026 tttcGTCCTGTCTGGTTTGGCCACCTCTGACTTAAGGGTAGATTTTTGTGATGGTCGTCAGGGGGGCGTAGACTATGTAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCAC < 2:300237/134‑1 TATCGTCCGGTCGGGGTTCGCCACCGCTGCCGTGAGCGTCGATTTTTGTGATGCTCGGCCGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCAC < 3:134381/138‑1 tcGTCCTGGCGGGGTTCGCCACCTCTGCCTTGCGCGGCTATTTTTGTGAGGCGCGGCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACAT < 6:349931/136‑1 GTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTG > 2:153532/1‑139 GTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTG > 3:381391/1‑139 CCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCG > 3:488140/1‑139 CTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGG > 8:456261/1‑139 CTGGCGGGGTGCGCCACCTCTGAGTGGAGCGTCGTTTTTTGTTATGGTCGGCAGGGGGGGGGAGCCTAGGGAAACACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGG < 1:529355/139‑1 TCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTGAGGGGGGCGGAGCCTATGGAAAAACCCCAGCAACGCGGCCTTTTTACGGTTACTGGCCTTTTGCTGGCCTTTTTCTCACAAGTGCGGCGG > 1:403785/1‑139 TCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCATGGGGGCGGAGCCTATGGAAAAACCCCAGCAACGCGGCCGTTTTACCGTTCCGGGCCGTTTGCGGGCCTTTTGCTCACATGTGCGGCGG > 1:368670/1‑139 TCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCAATGGAAAAACCCCAGCAAAGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGG > 5:163005/1‑139 TCGCCACCTCTGACTTGAGCGTCGATTTTTTTGAATCGCGTCAGGGGGGCGGAGCCGATGGAAAAACCCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCGTTTGCTCACAAGTTCGGCGGGGCGTGG > 6:109593/1‑139 TCGCCACCTCTGACTTAAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTG < 7:439998/138‑1 TCGCCACCTCTGACATTAGCGTAGATTTTTTTGATGCTCGTCAGGGGGGCGGATGCATTGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTACTTGCCTTTTGCAGGCCTTTTTGTCACATGTGCGGCGGGGCTTG < 8:184890/138‑1 CGCCACCTCTGACTTGCGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGC < 4:463838/139‑1 CGCCACCTCTGACTTGAGAGGCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTCGCCGTTTGCTGGCCTTTTTCGCACATGTTCGGCGGGGCTTGGC > 7:405607/1‑139 GCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCG < 8:61312/139‑1 CCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGG > 4:81781/1‑139 ACCTCTGCCTGGCGCTTCGATTTTTGTGATGCTCGTCTGGGGGGCGGAGCATATGGAAACACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCT < 3:20369/139‑1 ACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCT < 7:189191/139‑1 ACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCT < 5:523758/139‑1 CTCTGACTTGAGCGGCGATTTTTGTGATGCGCGGCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTA < 7:480223/139‑1 GACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGT < 6:265045/139‑1 ACTTGAGGGTCGATTTTTGTGATGCTCTTCCGGGGTGCGGAGCCTATGGAAACACGCCAGCAACGCGGCCTTTTTACGGTTACTGGCCTTTTTCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGT < 3:66346/138‑1 ACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAACACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGT < 1:210540/138‑1 ACTTGAGCGTCGATTTTTGTGATGCGCGGCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGT < 4:186666/138‑1 AGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGC < 8:41797/138‑1 GCGTCGATTTTTGTGATGCTCGTCAGGGGGGGGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTA < 6:304462/139‑1 TCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGA < 6:474663/139‑1 CGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGA > 4:253730/1‑138 CGATTTTTGTGATGCACCTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCGTTTTACGGTTCCTGGGCTTTTGCTGGCGGTTTGCTCACATGTGCGGCGGGGCTTGGCGGGTTATTGTATGGCTATGAC > 4:105126/1‑139 GATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACA < 7:111042/139‑1 TGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCA < 5:449849/138‑1 TGTGAGGCTGGTCCGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACctgt < 1:332289/138‑5 GGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTGTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGAGGCTTATTGTATTGCTATGAAACGGCAGTGATTTCTGGCGa > 8:506998/1‑136 GGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCG > 2:253779/1‑139 CGGAGCCTATGGAAAAACGCCAGCACCGCGGCCTTGTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGTCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGT > 5:420977/1‑139 CGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGT > 6:433224/1‑139 CGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGT > 5:380138/1‑139 CGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGT > 1:295134/1‑139 CGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGT > 1:174813/1‑139 CGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACA < 8:385541/113‑1 CGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCG < 1:255281/79‑1 GGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGC > 5:23421/1‑93 TATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCG < 4:148065/85‑1 TGGAAACACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGA < 5:73220/137‑1 TGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGA < 5:202168/137‑1 TGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGA < 3:300656/137‑1 TGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGA < 1:100213/137‑1 TGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGA > 3:236932/1‑137 TGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGA < 3:524182/137‑1 TGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGC > 4:500231/1‑85 AACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTA < 2:389905/139‑1 AACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCT > 6:396460/1‑80 CGCGAGCTACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGTGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATA < 6:226559/139‑1 CGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATA < 5:267457/139‑1 CGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATA < 4:219462/139‑1 CGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATA < 3:266231/139‑1 CGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATA < 3:338418/139‑1 CGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGT < 6:71327/122‑1 CGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTGTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATA < 5:128253/139‑1 CCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATA > 1:137952/1‑137 CCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACG < 7:152019/96‑1 CGCGGCCTTTTTACGGTTCCTGGGCTTTTGCTGGGCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAG < 4:334367/139‑1 CGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAG < 7:300853/139‑1 CGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAG < 8:349339/139‑1 CGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTC < 1:77264/139‑1 CGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTC < 8:146235/139‑1 CGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAG < 8:270283/137‑1 CGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGG < 1:442955/65‑1 GGCCTTTTTACGGTTCCTGGCCTTTTGCTTGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCC < 4:290426/139‑1 CCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGT < 3:454317/139‑1 CTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTT < 2:196660/139‑1 ACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGG < 3:168928/138‑1 CGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGA < 2:489738/138‑1 GGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGG > 3:415100/1‑139 GTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGG > 6:518909/1‑139 GTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTA > 7:269527/1‑61 GTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGG < 2:341729/39‑1 CCTGGCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACT > 8:105348/1‑139 GCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTG < 4:531742/137‑1 GCCTTTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTG < 2:96431/137‑1 TTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACCCGGCAGTGATTTCGGGCGCCCTCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGCCTTGTCTTTT > 2:432933/1‑139 TTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTT > 7:334267/1‑139 TTTGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCG < 8:306622/40‑1 TGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTC > 7:365235/1‑138 TGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTC > 7:70093/1‑138 TGCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTC < 2:60548/138‑1 GCTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTCA < 5:480450/138‑1 GCTGGCCTTTTGCTAACATGTGCGGCGGGGCTTGGCGTCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTAATGGAGGGACTTGTCATTTCA < 7:519419/138‑1 CTGGCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTCAAG < 6:155196/139‑1 GCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTCAAGCAT > 1:489277/1‑139 GCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATA > 6:192946/1‑97 GCCTTTTGCTCACATGTGCGGCGGGGCTTGGCGGCT > 4:419627/1‑36 TTTGCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGA > 4:379378/1‑114 GCTCACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTCAAGCATTATGAT < 5:304613/138‑1 ACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTCAAGCATTATGATTGGAG < 8:22887/139‑1 ACATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCGATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTCAAGCATTATGATTGGAG < 2:113427/139‑1 ATGTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTCAAGCATTATGATTGGAG > 5:342982/1‑137 GTGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTCAAGCATTATGATTGGAGGAGT > 7:230777/1‑139 TTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > pSIJ663_pHT315_araE_xy/5409‑5551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgtGCGGCGGGGCTTGGCGGCTTATTGTATGGCTATGACACGGCAGTGATTTCTGGCGCCATCGGTTTTCTGAAAGATTTATACAGCCTGAGTCCGTTTATGGAGGGACTTGTCATTTCAAGCATTATGATTGGAGGAGTT > pSIJ663_pHT315_araE_xy/9889‑10026 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |