| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | pSIJ663_pHT315_araE_xy | = 5551 | 66 (0.010) | 10195 (1.080) | 223/242 | 0.0 | 99.4% | intergenic (+820/–) | ampR/– | –/– |
| ? | pSIJ663_pHT315_araE_xy | 9889 = | NA (NA) | intergenic (+5158/–) | ampR/– | –/– | |||||
Only 100 of 10593 total aligned reads displayed.
AGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGTTATGACACAAAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTCGAAACAAACGCATTTGACCAAACAAGCAGACAA > pSIJ663_pHT315_araE_xy/5413‑5687 | aGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGGTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCCACGCGGCCATTTTACGGTTACTTGCCTATTGCTTGCCTTTTGCTAACATGT > 5:305809‑M1/1‑139 (MQ=255)aGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTTCTTGCCTTTTGCTCACATGT > 6:432987‑M1/1‑139 (MQ=255) gTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTg > 8:6140‑M1/1‑138 (MQ=255) ccTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTTTGTTGCTGGGCAGGGGGGCGGAGCCGATGGAAAAAAGCCCGCAACGCGGCCTTTTTTCGGTTGCTGGGCTGTTGCTGGGCTTTTTCTGACATGTTcg > 2:302546/1‑138 (MQ=255) cTGGCGGGTTGCGCCACGTCTGTGTTGAGGGTCGATTTTTGTGATGCTGGTCTGGGGGGGGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcgg < 2:488615‑M1/139‑5 (MQ=255) tGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCGTTTGCTGGCCTTTTGCTCACATGTgcggc > 6:265863‑M1/1‑134 (MQ=255) tCGGGTTTCGCCACCTTTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACCCCAGCCACGCGGCCTTTTTACGGGTACTGGCCTTTTGCTGGCCTTTTGCTGACATGTgcggctg > 8:348262‑M1/1‑132 (MQ=255) tCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTTTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCCACGCGGCCGTTTTACGGTTACGGGGCGTTTGCTGGCCTTTTGGTTACATGTgcggcgg > 3:48744‑M1/1‑132 (MQ=255) tCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCATGGGGGCGGAGCCTATGGAAAAACCCCAGCAACGCGGCCGTTTTACCGTTCCGGGCCGTTTGCGGGCCTTTTGCTCACATGTgcggcgg > 1:368670‑M1/1‑132 (MQ=255) tCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGCGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCGTTTGCTGGCCTTTTGCTCACATGTgcggcgg > 5:449789‑M1/1‑132 (MQ=255) tCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCCGCAACGCGGCCGTTTTAAGGTTGCTGGCCTTTTTCTTGGCGTTTTCTCACATGTgcggcgg > 1:254372‑M1/1‑132 (MQ=255) tCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcgg > 5:268934‑M1/1‑132 (MQ=255) ttCCCCACCTCTCACTTGCGCGTCGATTTTTGTGATGCTCGGCCGGGGGGCGGAGCCTATGGAAACACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttg < 1:209630‑M1/139‑14 (MQ=255) tCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcgtg < 5:234537‑M1/138‑14 (MQ=255) cGCCACCTCTGCCTGGAGCGTCGATTTTTGTGATGCTCGTCCGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttgg < 5:7439‑M1/138‑15 (MQ=255) cGCCACCTCTGACTTGAGAGGCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTCGCCGTTTGCTGGCCTTTTTCGCACATGTtcggcggggcttggc > 7:405607‑M1/1‑124 (MQ=255) ccACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcgg > 4:81781‑M1/1‑122 (MQ=255) aCCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggct < 7:109984‑M1/139‑20 (MQ=255) aCCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGGCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggct < 7:519755‑M1/139‑20 (MQ=255) aCCTCTGACTTGAGCGTCGATTTTTGTGAGGCTCGTCCGGGGGGCGGAGCCTATGGAAACACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggct < 3:298609‑M1/139‑20 (MQ=255) aCCTCTGACTTGAGCGTCGATTTTTGGGAGGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggct < 1:404378‑M1/139‑20 (MQ=255) aCCTCTGACTTGAGCGGCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggct < 8:418462‑M1/139‑20 (MQ=255) ctctGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggctta < 3:130600‑M1/139‑22 (MQ=255) cctTGAGCGGCTATTTTTGTGTTGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgta < 4:147260‑M1/138‑27 (MQ=255) aCTTGAGGGTCGATTTTTGTGATGCTCTTCCGGGGTGCGGAGCCTATGGAAACACGCCAGCAACGCGGCCTTTTTACGGTTACTGGCCTTTTTCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgt < 3:66346‑M1/138‑26 (MQ=255) aCTTGAGCGTCTTTTTTTGTGATGGTCGTCAGGGGGGCGGAGCCTATGCAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgt < 7:363838‑M1/138‑26 (MQ=255) aCTTGAGCGTCGATTTTTGTGATGCGCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgt < 5:524868‑M1/138‑26 (MQ=255) aCTTGAGCGTCGATTTTTGGGATGCGCGGCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgt < 6:395722‑M1/138‑26 (MQ=255) aGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggctttttgtatggcc > 1:491180‑M1/1‑108 (MQ=255) aGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggc < 5:164127‑M1/138‑31 (MQ=255) aGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggc < 6:157423‑M1/113‑6 (MQ=255) aGCGTCGATTTTTGTGATGCGCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcgg < 8:10585‑M1/115‑8 (MQ=255) gCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGATCCTATTGAAAAACGCCAGCAACGCGGCCGTTTTTCGGTTCCTGGCCTTTTGCTGTCCATTTGCTCACATGTgaggcggggcttggcggcgtattgtatggata > 8:228118‑M1/1‑107 (MQ=255) gTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAACACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATaa < 6:474781/139‑1 (MQ=255) tCGATTTTTGGGATGCTCGGCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatga < 5:202600‑M1/139‑36 (MQ=255) gATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgaca < 2:57563‑M1/139‑38 (MQ=255) tgtgAGGCTGGTCCGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacctgt < 1:332289‑M1/138‑43 (MQ=255) tgctgctCGCCTGGGGGGCGGAGCCTATGCAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagt < 1:443833‑M1/135‑45 (MQ=255) tgATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagt < 7:18870‑M1/138‑45 (MQ=255) gcgTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCACCGCGGCCTGTTTACGGTTCCTGGCCTTTTGCTGGGCTTTTGCTCACATGTgcggcggggcgtggcggcttattgtatggctatgacacggcagtgatttct < 7:439872‑M1/138‑52 (MQ=255) gTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTtgag < 4:418240/139‑1 (MQ=255) gggggCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTGTGCTGGCCTTTTGCTCACATGTgcggcggggcttggaggcttattgtattgctatgaaacggcagtgatttctggcga > 8:506998‑M1/1‑81 (MQ=255) gggCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatc > 6:304613‑M1/1‑79 (MQ=255) ggCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcg > 2:253779‑M1/1‑78 (MQ=255) cGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtttggctatgccccggcagtgatttcgggcgccagcggg > 6:350039‑M1/1‑76 (MQ=255) cGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcg < 8:305652‑M1/92‑17 (MQ=255) tGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 8:184560‑M1/137‑71 (MQ=255) tGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 3:265767‑M1/137‑71 (MQ=255) tGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 1:100213‑M1/137‑71 (MQ=255) tGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 1:174247‑M1/137‑71 (MQ=255) tGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggc > 4:500231‑M1/1‑67 (MQ=255) gAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaaga < 4:531829‑M1/139‑75 (MQ=255) aaaaaCGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagat < 2:342113‑M1/139‑76 (MQ=255) aaCGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagattta > 8:456371‑M1/1‑61 (MQ=255) aaCGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga > 6:111023‑M1/1‑61 (MQ=255) aaCGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgta < 3:41416‑M1/87‑27 (MQ=255) aaCGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttaatgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagattta > 2:115965‑M1/1‑61 (MQ=255) aaCGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggc < 7:151040‑M1/79‑19 (MQ=255) cGCCCGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttata < 4:378511‑M1/139‑81 (MQ=255) cGCCAGCAACGCGGGCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttata < 5:482708‑M1/139‑81 (MQ=255) cGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCGTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttata > 3:164821‑M1/1‑59 (MQ=255) cGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttata < 7:299068‑M1/139‑81 (MQ=255) cGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttata < 6:518272‑M1/139‑81 (MQ=255) cGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttata < 8:385798‑M1/139‑81 (MQ=255) cGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttata < 4:33413‑M1/139‑81 (MQ=255) cGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTGTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttata < 5:128253‑M1/139‑81 (MQ=255) gCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatac < 1:77979‑M1/139‑82 (MQ=255) cgcgGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgag < 3:337519‑M1/139‑90 (MQ=255) cgcgGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgag < 4:10501‑M1/139‑90 (MQ=255) cgcgGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgag < 4:290657‑M1/139‑90 (MQ=255) cgcgGCCTGTTTACGGGTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgag < 2:153643‑M1/139‑90 (MQ=255) cgGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtc < 8:146235‑M1/139‑92 (MQ=255) ccTTTTTACGGTGCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgt < 8:269104‑M1/139‑95 (MQ=255) cTTTTTACGGTTGCTGGCCTTTTGCTGGCCTTTTGCTCACATGGgcggcggggcgtggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtt < 4:46383‑M1/139‑96 (MQ=255) cTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtt < 2:389689‑M1/139‑96 (MQ=255) cTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtt < 2:196660‑M1/139‑96 (MQ=255) cTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtt < 3:523561‑M1/139‑96 (MQ=255) cGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatgga < 5:420514‑M1/138‑102 (MQ=255) tCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggac > 1:295024‑M1/1‑33 (MQ=255) tCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggac > 7:480376‑M1/1‑33 (MQ=255) ccTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggact > 3:453347‑M1/1‑32 (MQ=255) ccTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggact > 5:380318‑M1/1‑32 (MQ=255) ccTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgag > 3:380588‑M1/1‑32 (MQ=255) gccttttgctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttg < 6:226831‑M1/137‑110 (MQ=255) gccgtttgctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtc < 6:694‑M1/139‑112 (MQ=255) ccttttgctggccttttgctCACATGTgcggcggggcttggcggcttattgt > 7:70546‑M1/1‑27 (MQ=255) ttttgctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgattcagtttatggagggacttgtcatt > 7:332121‑M1/1‑25 (MQ=255) tttgctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaaga > 1:530967‑M1/1‑24 (MQ=255) tgctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttc < 7:22856‑M1/138‑117 (MQ=255) tgctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttc < 4:253994‑M1/138‑117 (MQ=255) tgctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttc < 2:432099‑M1/138‑117 (MQ=255) gctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttca < 4:185865‑M1/138‑118 (MQ=255) gctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcgggtttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttca < 1:137739‑M1/138‑118 (MQ=255) gctggccttttgctCACATGTgcggcggggcgtggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttca < 2:93294‑M1/138‑118 (MQ=255) gccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttata > 6:192946‑M1/1‑17 (MQ=255) ttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggca < 5:343510‑M1/54‑43 (MQ=255) gctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcattatgat < 4:219455‑M1/138‑129 (MQ=255) acaTGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcattatgattggag < 3:201784‑M1/139‑134 (MQ=255) caTGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcgggtttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcattatgattggagg < 7:268325‑M1/139‑135 (MQ=255) tgtgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcattatgattggaggag < 3:236553‑M1/139‑137 (MQ=255) | AGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGTTATGACACAAAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTCGAAACAAACGCATTTGACCAAACAAGCAGACAA > pSIJ663_pHT315_araE_xy/5413‑5687 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |