| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | pSIJ663_pHT315_araE_xy | = 5551 | 44 (0.010) | 4089 (1.030) | 195/240 | 0.0 | 99.0% | intergenic (+820/–) | ampR/– | –/– |
| ? | pSIJ663_pHT315_araE_xy | 9889 = | NA (NA) | intergenic (+5158/–) | ampR/– | –/– | |||||
Only 100 of 4274 total aligned reads displayed.
AGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGTTATGACACAAAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTCGAAACAAACGCATTTGACCAAACAAGCAGACAAAA > pSIJ663_pHT315_araE_xy/5413‑5689 | aGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGT > 3:75639‑M1/1‑139 (MQ=255) gTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGAGTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCATCAACGCGGCCTTTTTACGGTTCCTTGCCGTTTGCTGGCCTTTTGATCACATGTg > 8:261721‑M1/1‑138 (MQ=255) tGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGGGCGTCAGGGGGGCGGAGCCTATGGAAAAACCCCCGCAAAGCGGCCGTTTTAAGGTTCCTGGCCGTTTGCTGGCCGTTTGGTCACAGGTgcggc > 8:125829‑M1/1‑134 (MQ=255) tCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTGAGGGGGGCGGAGCCGATTGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTggggcgg > 1:92120‑M1/1‑132 (MQ=255) tCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcgg > 7:226582‑M1/1‑132 (MQ=255) tCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcgg < 4:232867‑M1/136‑5 (MQ=255) tCGCCACGTCTGACTTGAGCGTGGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCATATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgctgcggggcttg < 2:238023‑M1/138‑14 (MQ=255) tCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttg < 5:267477‑M1/138‑14 (MQ=255) tCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttg < 3:99458‑M1/138‑14 (MQ=255) agaccgcctctgacTCGAGCGGCGATTTTTGTGTGGCTCGGCTGGGGGGGGGAGCGTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttgg < 1:164548‑M1/133‑15 (MQ=255) gCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcg < 5:319110‑M1/139‑17 (MQ=255) ccACCTCTGACTTGAGCGTCGATTTTTGTGATGCGAGTCAGGGGGGCGGCGCCTATGGAAAAACGCCCGCAACGCGGCCTTTTTAAGGTTCCTGGGCTTTTTCTGGCCTTTTTCTCACATGTgcggcggggcgtggcgg > 2:208628‑M1/1‑122 (MQ=255) cACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggc < 1:253142‑M1/139‑19 (MQ=255) aCCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggct < 4:302979‑M1/139‑20 (MQ=255) aCCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggct < 7:319504‑M1/139‑20 (MQ=255) aCCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggct < 5:117235‑M1/139‑20 (MQ=255) aCCTCTGACTTGAGCGGCGATTTTTGTGATGCTCGGCAGGGGGGCGGAGCCTATGGAAACACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggct < 5:340430‑M1/139‑20 (MQ=255) aCCTCTGACTGGCGCGTCGTTTTTTGTGATGCTCGGCAGGGGGGCGGTGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggct < 5:215539‑M1/139‑20 (MQ=255) cctcgtacttgtgCGTCGATTTTTGTGAGGCTCGTCAGGGGGGCGGAGCATATTGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggctt < 5:83401‑M1/133‑21 (MQ=255) ctctGACTTGAGGGTCGTTTTTTGTTATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggctta < 4:254660‑M1/139‑22 (MQ=255) ctctGACTTGAGCGTCGATTTTTGTGATGGTCGTCTGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggctta < 8:156600‑M1/139‑22 (MQ=255) ctctGACTTGAGCGTCGATTTTTGTGATGCGCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggct < 8:315918‑M1/137‑20 (MQ=255) ctctGACTTGAGCGGCGATTTTTGTGATGCTCGTCTGGGGGGGGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggctta < 6:15616‑M1/139‑22 (MQ=255) gACTTGTGCGTCGATTTTTGTGATGCTCGTCCGGGGGGCGGAGCCTAGGGAAAAACGCCAGCAACGCGGCCTTTTTACGGGTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgt < 4:71903‑M1/139‑26 (MQ=255) acgtgcgcgtcgaTTTTTGTGATGGTGGTCTGGGGGGCGGAGCCTATGGAAACACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgt < 1:296512‑M1/132‑26 (MQ=255) acgtgagCGTCGAGTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgt < 4:14447‑M1/135‑26 (MQ=255) aCTTGCGCGTCGTTTTTTGTGATGCTCGTCTGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgt < 2:149806‑M1/138‑26 (MQ=255) aCTTGAGCGTCGTTTTTTGTGATGGGGGTCTGGGGGGCGGAGCCTAGGGAAACACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgt < 7:297423‑M1/138‑26 (MQ=255) aCTTGAGCGTCGATTTTTGTGATGCTCGTCCGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgta < 8:291796‑M1/139‑27 (MQ=255) aCTTGAGCGTCGAGTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAACACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgt < 4:18126‑M1/138‑26 (MQ=255) gAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggct > 3:128812‑M1/1‑109 (MQ=255) cgcggcgaTTTTTGTGATGCGCGTCAGGGGGGCGGAGCCTATGGAAACACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggc < 1:141785‑M1/137‑31 (MQ=255) aGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggct < 3:146633‑M1/127‑20 (MQ=255) aGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggct > 5:292007‑M1/1‑108 (MQ=255) aGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcgtggcggcttattgtatggct > 7:82263‑M1/1‑108 (MQ=255) aGCGTCGATTTTTGTGATGCTCGGCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgt < 7:250185‑M1/133‑26 (MQ=255) tgtCGTTTTTTGTGAGGCGGGGCTGGGGGGCGGAGCGTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggcta < 6:214343‑M1/137‑33 (MQ=255) tgAGGCTCTTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagt < 5:247312‑M1/138‑45 (MQ=255) tGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatt > 5:60113‑M1/1‑91 (MQ=255) tGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggct < 7:16196‑M1/110‑20 (MQ=255) gggggCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgcca > 1:65878‑M1/1‑81 (MQ=255) ggggggGTGCCTATGTAAACACGCCAGCACCGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcgtggcggcttattgtatggctatgacacggcagtgatttctggcgccat < 4:44314‑M1/139‑60 (MQ=255) gggCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatc > 7:133991‑M1/1‑79 (MQ=255) cGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggt > 8:3769‑M1/1‑76 (MQ=255) cGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggt < 2:184132‑M1/139‑64 (MQ=255) cGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagt > 5:162178‑M1/1‑76 (MQ=255) cGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgta > 1:229874‑M1/1‑76 (MQ=255) ccTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttct < 7:65151‑M1/139‑69 (MQ=255) tATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 6:273558‑M1/139‑71 (MQ=255) tATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 4:9989‑M1/139‑71 (MQ=255) tgtaaaaacgcCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 4:278018‑M1/134‑71 (MQ=255) tgcaaaaacgcCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 3:24081‑M1/134‑71 (MQ=255) tGGAAAATCGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttgtga < 7:184005‑M1/137‑71 (MQ=255) tGGAAAAACGCCAGGAACGCGGCCGTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 2:317669‑M1/137‑71 (MQ=255) tGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaa < 3:171449‑M1/139‑73 (MQ=255) tGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 3:220993‑M1/137‑71 (MQ=255) tGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 7:272886‑M1/137‑71 (MQ=255) tGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga > 7:110643‑M1/1‑67 (MQ=255) tGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgaca > 6:84430‑M1/1‑67 (MQ=255) tGGAAAAACGCCAGCAACGCGGCCTTTCTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga < 6:10724‑M1/137‑71 (MQ=255) gAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaaga < 4:204185‑M1/139‑75 (MQ=255) aaaCGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatt > 1:122308‑M1/1‑62 (MQ=255) aaCGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagat > 6:181548‑M1/1‑61 (MQ=255) aaCGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccagcggttttctgaaagattta > 1:206715‑M1/1‑61 (MQ=255) aaCGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgt > 2:119190‑M1/1‑61 (MQ=255) cGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttata < 1:275913‑M1/139‑81 (MQ=255) cGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttata < 1:101122‑M1/139‑81 (MQ=255) cGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttata < 3:50264‑M1/139‑81 (MQ=255) cGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctga > 4:332145‑M1/1‑59 (MQ=255) aGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttatcgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagc < 7:42400‑M1/139‑85 (MQ=255) cgctGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggaggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgag < 4:122337‑M1/139‑90 (MQ=255) cgcgGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgag < 8:58350‑M1/139‑90 (MQ=255) gcgGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagt < 8:100057‑M1/139‑91 (MQ=255) cgGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttata > 6:249911‑M1/1‑48 (MQ=255) gCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttgg > 8:237361‑M1/1‑46 (MQ=255) aCGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatgg < 3:193551‑M1/138‑101 (MQ=255) cGGTTCCTGGCCTTTTGCTGGCCTTTTGCTAACATGTgcggcggggcttggcggcttattgtagggctatgacacggcagtgatttctggcgccatcgggtttctgaaagatttatacagcctgagtccgattatgga < 5:189374‑M1/138‑102 (MQ=255) tCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggc > 1:32307‑M1/1‑33 (MQ=255) ccTGGCCTTTTGCTGGCCTTTTGCTCACATGTgcggcggggcttggcggcttattgt > 3:108576‑M1/1‑32 (MQ=255) ctggccttttgctggccttttgCTCACATGTgcggcggggcttggcggct > 1:43332‑M1/1‑31 (MQ=255) tttgctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcattt > 2:286232‑M1/1‑24 (MQ=255) tttgctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatt > 3:311267‑M1/1‑24 (MQ=255) tttgctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttataaagcctgagtccgtttatggagggacttgacattt > 5:140296‑M1/1‑24 (MQ=255) tgctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttc < 2:58371‑M1/138‑117 (MQ=255) gctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttca < 3:286948‑M1/138‑118 (MQ=255) gctggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgacttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttca < 8:181118‑M1/138‑118 (MQ=255) ggccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatgg > 3:334964‑M1/1‑18 (MQ=255) gccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttataatgcctgagtccgtttatggagggacttgtcatttcaagcct > 2:82093‑M1/1‑17 (MQ=255) ccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgttatttcaagcatt < 6:299580‑M1/139‑124 (MQ=255) ccttttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcatt < 8:211092‑M1/139‑124 (MQ=255) tttgctCACATGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgagttctggcgccatcggtgttctgaaagctttataccgccggagtccgtgtatggagggacttgtccttgaaaccattag > 6:13282‑M1/1‑13 (MQ=255) agagactgcggcggggcttggcggcttattgtattgctatgacacggcagtgatttcttgagcgatcggttttctgaaagattttttcagcctgagtccgtttatggagggacttgtcatttctatcattatgattgga < 6:324244‑M1/133‑133 (MQ=255) acaTGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcattatgattggag < 1:185551‑M1/139‑134 (MQ=255) acaTGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcattatgattggag < 8:80135‑M1/139‑134 (MQ=255) acaGGTgaggcggggcttgggggcttattgtatggctatgtcacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaaggattatgattggag < 6:63181‑M1/139‑134 (MQ=255) caTGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcattatgattggag > 2:41443‑M1/1‑5 (MQ=255) caTGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcattatgattggag > 6:340652‑M1/1‑5 (MQ=255) aTGTgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcattatgattggag < 7:204244‑M1/137‑134 (MQ=255) tgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagccttagtccgtttatggagggacttgtcatttcaagcattatgattggatgagtt > 3:263084‑M1/1‑1 (MQ=255) tgcggcggggcttggcggcttattgtatggctatgacacggcagtgatttctggcgccatcggttttctgaaagatttatacagcctgagtccgtttatggagggacttgtcatttcaagcattatgattggtggagtt > 2:262639‑M1/1‑1 (MQ=255) | AGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGTTATGACACAAAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTCGAAACAAACGCATTTGACCAAACAAGCAGACAAAA > pSIJ663_pHT315_araE_xy/5413‑5689 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |