| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | BS168_reference_genome | 3484072 = | NA (NA) | 2105 (0.140) | 13/272 | NT | 5.2% | coding (1395/1395 nt) | araE | arabinose‑related compounds permease |
| ? | pSIJ663_pHT315_araE_xy | = 11232 | 39518 (1.280) | intergenic (+6501/–) | ampR/– | –/– | |||||
Only 100 of 5807 total aligned reads displayed.
TGCCAATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAaaa‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < BS168_reference_genome/3484220‑3484072‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATAGG < pSIJ663_pHT315_araE_xy/11232‑11081 TGCCAATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAA < 2:2885915/150‑1TGCCAATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAA < 2:2569564/150‑1TGCCAATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAA < 1:677266/150‑1TGCCAATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAA < 1:5117344/150‑1TGCCAATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAA < 1:4567955/150‑1TGCCAATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAA > 1:4447233/1‑150 gtCAATGATGATCGACTCTTTCGGGCACGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTCTTTCCTGTTTGTCGTTACGATCTGTACAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAA < 1:1750983/148‑1 GCCAATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAA > 2:893248/1‑150 GCCAATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAA > 2:5218957/1‑150 GCCAATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAA > 1:4338076/1‑150 CCAATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAA < 1:1108183/150‑1 CCAATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAA > 2:4303499/1‑150 CCAATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAA > 2:3544638/1‑150 CCAATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAA > 1:1005088/1‑150 CCAATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAA < 1:1651722/150‑1 aAATGAGGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGAATAACATCCTTAGTTTCCTGTTTGTAGTTACGATCTGTCCTGAAAGGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAACATGAAAAA > 1:5325469/2‑150 CAATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAA < 1:3800517/150‑1 CAATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAA > 2:5009103/1‑150 CAATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAA < 2:1166145/150‑1 CAATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGACTAACATCCTTTGTTTCCTGTTTGTAGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAA > 1:4775917/1‑150 AATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAA > 2:5113854/1‑150 AATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAA > 1:2739324/1‑150 AATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAA < 1:887497/150‑1 AATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAA > 1:13116/1‑150 AATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAA > 2:3638651/1‑150 AATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAA > 2:3451321/1‑150 ATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAA < 2:583087/150‑1 ATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAA > 2:4687232/1‑150 ATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAA > 2:2352285/1‑150 ATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAA > 2:5403071/1‑150 ATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAA < 1:183980/150‑1 ATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAA > 2:3985759/1‑150 ATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAA < 1:2459924/150‑1 TGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTGGTTACTATCTCTCTAGAAAGCAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAG < 1:5423734/150‑1 TGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAG > 1:2549439/1‑150 TGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAG < 1:3918584/150‑1 GATGATCGATTCTTTCGGGCTCGGCTTTACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGC < 2:1055277/150‑1 GATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGC > 1:1552795/1‑150 GATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGC < 1:2141682/150‑1 GATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGC < 2:4101026/150‑1 GATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGC > 2:2032869/1‑150 GATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGAACTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAAGGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGC > 1:4893982/1‑150 ATGATCGATTTTTTGGGTCGCGGCTGTACATTTTGGACCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGCCGTTACGATCTGAACAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCG < 2:3225695/150‑1 ATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCG < 1:1952950/150‑1 ATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCG > 1:3662953/1‑150 ATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCG > 2:183063/1‑150 ATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCG < 2:4779139/150‑1 ATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGAACTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGCCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCG < 2:2142056/150‑1 TGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGC < 2:2476984/150‑1 TGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGC > 2:1715478/1‑150 TGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGC > 2:489343/1‑150 TGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGC < 2:5318222/150‑1 TGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGC < 2:152440/150‑1 TGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGC > 1:283298/1‑150 TGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCCCTCGAGGAAATTGAAACGCTTTGGATAAAATGAAAAAAAGCGC > 2:779634/1‑150 GATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCA < 1:3262837/150‑1 GATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCA < 2:4432358/150‑1 ATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAG < 2:1292638/150‑1 ATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAG > 2:5625914/1‑150 ATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAG < 2:3347485/150‑1 TCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGGAAAGCTTTGGATAAAATGAAAAAAAGCACAGC > 2:664742/1‑150 TCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGTTTTGGATAAAATGAAAAAAAGCGCAGC < 1:972722/150‑1 TCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGC < 1:4231537/150‑1 TCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGC < 1:1214811/150‑1 CGATTCTTTGGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCT < 1:3136855/150‑1 CGATTCTTTCGGGCTCGCTTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCT < 1:500127/150‑1 CGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAACAGCGCAGCT < 1:3358749/150‑1 CGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCT > 1:3480392/1‑150 CGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCT < 1:4127653/150‑1 CGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCT > 2:3865823/1‑150 CGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCT < 1:783923/150‑1 CGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCT < 1:2038595/150‑1 CGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCT > 1:5614677/1‑150 CGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTCTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAANAGCTTTGGATAAAATGAAAAAAAGCGCAGCT > 1:1471813/1‑150 CGATTCTTTCGGGCTCGCCTATACATTTTGGACCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAAAAAAAGCGCAGCT < 2:3096305/150‑1 nAAANAGCGCAGCTATTTCAGCTGCNCTTTTTTTCATTTTATCCAAAGCNTTTCAATTTNCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATA > 1:4018695/2‑150 AAAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATA > 2:4556994/1‑150 AAAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATA < 1:3559167/150‑1 AAAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATA > 2:1621163/1‑150 AAAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATA > 2:5738479/1‑150 AAAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATA < 1:2645885/150‑1 AAAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATA < 2:1420696/150‑1 AAAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATA > 1:2332110/1‑150 AAAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATA < 1:5223128/150‑1 AAAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATA > 2:2669744/1‑150 AAAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATA > 2:2972327/1‑150 AAAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATA > 1:573920/1‑150 AAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATAG < 1:2938365/150‑1 AAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATAG < 1:2233943/150‑1 AAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATAG > 1:4681854/1‑150 AAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATAG < 2:55016/150‑1 AAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATAG < 2:2226533/150‑1 AAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATAG < 1:3039329/150‑1 AAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATAG < 2:4199095/150‑1 AAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGAATGTTAATCACCGCAAAGATCCAAAATGTATAG > 1:139564/1‑150 AAAAAGCGCAGCTATTTCAGCTGCGCTTTTATTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAGGGATGTTAATCACCGCAAAGATCCAAAATGTATAG > 1:5525313/1‑150 AAAAGCGCAGCTATTTCAGCTGCGCTTTTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATAGG < 1:5852509/150‑1 AAAAGCGCAGCTATTTCAGCTGCGCTTTTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATAGG > 2:1930690/1‑150 AAAAGCGCAGCTATTTCAGCTGCGCTTTTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATAGG > 2:2754172/1‑150 AAAAGCGCAGCTATTTCAGCTGCGCTTTTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATAGG < 2:3749500/150‑1 TGCCAATGATGATCGATTCTTTCGGGCTCGCCTATACATTTTGGATCTTTGCGGTGATTAACATCCTTTGTTTCCTGTTTGTCGTTACGATCTGTCCAGAAACGAAGAACAAATCGCTCGAGGAAATTGAAAAGCTTTGGATAAAATGAaaa‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < BS168_reference_genome/3484220‑3484072‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAAAGCGCAGCTATTTCAGCTGCGCTTTTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATAGG < pSIJ663_pHT315_araE_xy/11232‑11081 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |