| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3590933 = | NA (NA) | 9 (0.030) | 4/264 | NT | NA | noncoding (1/66 nt) | REP257 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP257 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | 3590958 = | NA (NA) | noncoding (26/66 nt) | REP257 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP257 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
CACCACAGCAGGCACTGGATACCGCCGTTGAGCGTGGAAATCAGTTGCTGCGCCGCTTTGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3591088‑3590933‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggcCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGTCTTCTTACCGGTCCACA > NC_000913/3590958‑3591106 CACCACAGCAGGCACTGGATACCGCCGTTGAGCGTGGAAATCAGTTGCTGCGCCGCTTTGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCA < 1:851868/150‑1 ACCACAGCAGGCACTGGATACCGCCGTTGAGCGTGGAAATCAGTTGCTGCGCCGCTTTGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCAT > 2:4440689/1‑150 ACCACAGCAGGCACTGGATACCGCCGTTGAGCGTGGAAATCAGTTGCTGCGCCGCTTTGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCAT > 2:4440187/1‑150 ACCACAGCAGGCACTGGATACCGCCGTTGAGCGTGGAAATCAGTTGCTGCGCCGCTGTGAGAAATCGACGAAGTCTTAATCAGTGGAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCAT > 2:2592155/1‑150 ACCACAGCAGGCACTGGATACCGCCGTTGAGCGTGGAAAGCAGTTGCTGCGCCGCTTTGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGCGAAGCGAAGCGCAT > 2:4531595/1‑150 CCACAGCAGGCACTGGATACCGCCGTTGAGCGTGGAAATCAGTTGCTGCGCCGCTTTGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATC > 1:3768518/1‑150 CCACAGCAGGCACTGGATACCGCCGTTGAGCGTGGAAATCAGTTGCTGCGCCGCTTTGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATC < 1:585919/150‑1 CCACAGCAGGCACTGGATACCGCCGTTGAGCGTGGAAAACAGTTGCTGCGCCGCGTTGAGAAAACCACGAAGTCTTAAGCAGAGTAAATTCGGAAGCGTTTCGCTTATCTGAACAGGCATCGCGTGTAGGCCGGATAAGCGCAGCGCAac > 1:4456596/1‑148 CACAGCAGGCACTGGATACCGCCGTTGAGCGTGGAAATCAGTTGCTGCGCCGCTTTGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGTCCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCC > 2:3584242/1‑150 CACAGCAGGCACTGGATACCGCCGTTGAGCGTGGAAATCAGTTGCTGCGCCGCTTTGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCC > 2:541120/1‑150 CACAGCAGGCACTGGATACCGCCGTTGAGCGTGGAAATCAGTTGCTGCGCCGCTTTGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCC > 2:5042103/1‑150 CACAGCAGGCACTGGATACCGCCGTTGAGCGTGGAAATCAGTTGCTGCGCCGCTTTGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCC > 2:266443/1‑150 CACAGCAGGCACTGGATACCGCCGTTGAGCGTGGAAATCAGTTGCTGCGCCGCTTTGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCC > 2:2350784/1‑150 CACAGCAGGCACTGGATACCGCCGTTGAGCGTGGAAATCAGTTGCGGCGCCGCTTTGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCC > 1:1182250/1‑150 CAGCAGGCACTGGATACCGCCGTTGAGCGTGGAAATCAGTTGCTGCGCCGCTTTGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGG < 2:780594/150‑1 CAGCAGGCACTGGATACCGCCGTTGAGCGTGGAAATCAGTTGCTGCGCCGCTTTGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGG < 2:780593/150‑1 CAGCAGGCACTGGATACCGCCGTTGAGCGTGGAAATCAGTTGCTGCGCCGCTTTGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGG < 1:5792815/150‑1 CAGCAGGCACTGGATACCGCCGTTGAGCGTGGAAATCAGTTGCTGCGCCGCTTTGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGAGGCGTGTCGCTGATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGG > 2:3346952/1‑150 AGCAGGCACTGGATACCGCCGTTGAGCGTGGAAATCAGTTGCTGCGCCGCTTTGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGGGTAGGCCGGATAAGCGAAGCGCATCCGGC > 1:1299956/1‑150 TCGCGTGTAGGCCGGATCAGCGAAGCGCATCCGGCCTACACGCGATGCCAGGGCAGATACGCGAAACGCATCCGACCGTCCACTGATGACGACTGCGTCGATTTCTCACAGCGGCGCCGCAACTGATTTCCACGCGCACCGGCGGTCTCC > 2:4834033/1‑150 GCCGGATAAGCGAAGCGCATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCT > 1:81607/1‑150 GCCGGATAAGCGAAGCGCATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCT > 1:81776/1‑150 GCCGGATAAGCGAAGCGCATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCT > 1:3165012/1‑150 GCCGGATAAGCGAAGCGCATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAA < 2:1858489/80‑1 GCCGGATAAGCGAAGCGCATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAA > 1:1858489/1‑80 CCGGATAAGCGAAGCGCATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTG > 1:5318022/1‑150 CCGGATAAGCGAAGCGCATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTG > 2:4458899/1‑150 CCGGATAAGCGAAGCGCATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTG > 2:4358542/1‑150 TCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGTCTTCTTACCGGT < 1:4808981/150‑1 TCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGTCTTCTTACCGGT < 2:5243203/150‑1 TCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGTCTTCTTACCGGT < 1:4809254/150‑1 TCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGTCTTCTTACCGGT > 1:5704264/1‑150 CCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGTCTTCTTACCGGTC < 2:3255347/150‑1 CGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGTCTTCTTACCGGTCC > 1:3222696/1‑150 CGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGTCTTCTTACCGGTCC < 1:5236797/150‑1 CGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGTCTTCTTACCGGTCC > 1:5788803/1‑150 GGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGTCTTCTTACCGGTCCA > 2:5119616/1‑150 GCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGTCTTCTTACCGGTCCAC > 1:1444848/1‑150 CCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCGCGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGTCTTCTTACCGGTCCACA < 2:1913886/150‑1 CCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGTCTTCTTACCGGTCCACA < 1:1610322/150‑1 CCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGTCTTCTTACCGGTCCACA < 1:1603095/150‑1 CACCACAGCAGGCACTGGATACCGCCGTTGAGCGTGGAAATCAGTTGCTGCGCCGCTTTGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3591088‑3590933‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggcCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGTCTTCTTACCGGTCCACA > NC_000913/3590958‑3591106 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |