New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3590933 =NA (NA)9 (0.030) 4/264 NT NA noncoding (1/66 nt) REP257 (repetitive extragenic palindromic) element; contains 2 REP sequences REP257 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 3590958 = NA (NA)noncoding (26/66 nt) REP257 (repetitive extragenic palindromic) element; contains 2 REP sequences REP257 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 399 total aligned reads displayed.

CGCCCGCAGGCCAGATAAAAAAGATAACGGTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGTCTTCTTACCGGTCCACAC  >  NC_000913/3590809‑3591107
                                                                                                                                                     |                                                                                                                                                     
 gCCCGCAGGCCAGATAAAAAAGATAACGGTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCt                                                                                                                                                      >  2:1757381/1‑150 (MQ=255)
  cccGCAGGCCAGATAAAAAAGATAACGGTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTa                                                                                                                                                     >  1:3910596/1‑150 (MQ=255)
      cAGGCCAGATAAAAAAGATAACGGTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACAcg                                                                                                                                                 >  2:1037637/1‑150 (MQ=255)
      cAGGCCAGATAAAAAAGATAACGGTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACAcg                                                                                                                                                 >  2:3960405/1‑150 (MQ=255)
       aGGCCAGATAAAAAAGATAACGGTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACAcgc                                                                                                                                                <  2:5660595/150‑1 (MQ=255)
         gCCAGATAAAAAAGATAACGGTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGa                                                                                                                                              <  1:250661/150‑1 (MQ=255)
           cAGATAAAAAAGATAACGGTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATg                                                                                                                                            >  2:5417342/1‑150 (MQ=255)
           cAGATAAAAAAGATAACGGTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATg                                                                                                                                            <  1:2173544/150‑1 (MQ=255)
            aGATAAAAAAGATAACGGTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGc                                                                                                                                           <  2:2232074/150‑1 (MQ=255)
            aGATAAAAAAGATAACGGTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGc                                                                                                                                           <  2:724296/150‑1 (MQ=255)
             gATAAAAAAGATAACGGTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGcc                                                                                                                                          >  2:2796767/1‑150 (MQ=255)
              aTAAAAAAGATAACGGTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCATCGCTTATCCGGCCTACACGCGATGCCa                                                                                                                                         >  1:5243203/1‑150 (MQ=255)
                aaaaaaGATAACGGTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAgg                                                                                                                                       <  2:1272742/150‑1 (MQ=255)
                  aaaaGATAACGGTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTc                                                                                                                                     <  2:3752289/150‑1 (MQ=255)
                   aaaGATAACGGTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCa                                                                                                                                    >  1:4266954/1‑150 (MQ=255)
                   aaaGATAACGGTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCa                                                                                                                                    <  2:676767/150‑1 (MQ=255)
                    aaGATAACGGTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAg                                                                                                                                   <  1:2079583/150‑1 (MQ=255)
                     aGATAACGGTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGa                                                                                                                                  <  2:4266449/150‑1 (MQ=255)
                     aGATAACGGTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGa                                                                                                                                  <  2:5053666/150‑1 (MQ=255)
                       aTAACGGTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATa                                                                                                                                >  1:5644826/1‑150 (MQ=255)
                          aCGGTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGc                                                                                                                             <  1:3570847/150‑1 (MQ=255)
                           cGGTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCg                                                                                                                            >  1:5351684/1‑150 (MQ=255)
                           cGGTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCg                                                                                                                            >  1:1942641/1‑150 (MQ=255)
                            ggTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGTTATGATGACATTACGTTTTATTCCTGAACTGTGCCGGATGCGCTTCGGTTATCCGGCCTACTCGCGATGCCAGGTCAGATAAGCGa                                                                                                                           <  1:1237862/150‑1 (MQ=255)
                            ggTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGa                                                                                                                           <  1:5559370/150‑1 (MQ=255)
                                    tgaGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATc                                                                                                                   <  2:3651141/150‑1 (MQ=255)
                                    tgaGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATc                                                                                                                   >  1:5115712/1‑150 (MQ=255)
                                       gCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACCCCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGa                                                                                                                <  2:2387807/150‑1 (MQ=255)
                                        cTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGAc                                                                                                               >  2:2630000/1‑150 (MQ=255)
                                         ggcggcgCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACa                                                                                                              <  1:3030288/149‑1 (MQ=255)
                                             gcgcGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTac                                                                                                          >  1:2026193/1‑150 (MQ=255)
                                                cgACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACt                                                                                                       >  2:3900214/1‑150 (MQ=255)
                                                cgACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGACGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACt                                                                                                       >  1:5433895/1‑150 (MQ=255)
                                                     agcagATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTa                                                                                                  >  2:5103005/1‑150 (MQ=255)
                                                     agcagATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTa                                                                                                  >  1:4748790/1‑150 (MQ=255)
                                                      gcagATAAGGCAGCCAGCGCGAGCGTAACACCGGACGGGATGATGACATTACGGTTAAATCCTGAACTGTGCCGGATGCGCTTCGCTTATAAGGACTACACGCGATGCCAGGTCATATCAGCGAAACGCATCCGACATTAAACTGATaaa                                                                                                 >  2:4367110/1‑150 (MQ=255)
                                                      gcagATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTaa                                                                                                 >  2:1175589/1‑150 (MQ=255)
                                                      gcagATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTaa                                                                                                 <  2:4504839/150‑1 (MQ=255)
                                                      gcagATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTaa                                                                                                 <  2:3170138/150‑1 (MQ=255)
                                                       cagATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCCGATAAGCGAAACGCATCCGACATTACACTGATTAAg                                                                                                <  1:1472136/150‑1 (MQ=255)
                                                         gATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGAc                                                                                              >  2:4200961/1‑150 (MQ=255)
                                                         gATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGAc                                                                                              >  2:299143/1‑150 (MQ=255)
                                                          aTAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACt                                                                                             <  1:322390/150‑1 (MQ=255)
                                                           tAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACtt                                                                                            <  2:189461/150‑1 (MQ=255)
                                                              ggCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTtcgt                                                                                         <  1:2965642/150‑1 (MQ=255)
                                                               gCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTtcgtc                                                                                        <  1:602051/150‑1 (MQ=255)
                                                                 agccagcGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGa                                                                                      <  1:1024079/150‑1 (MQ=255)
                                                                 agccagcGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGa                                                                                      <  2:2951313/150‑1 (MQ=255)
                                                                     agcGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTtc                                                                                  >  1:2751317/1‑150 (MQ=255)
                                                                     agcGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACAGTACCCTGATTAAGACGGCGTCGATTtc                                                                                  >  1:3385049/1‑150 (MQ=255)
                                                                      gcgcGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTtct                                                                                 <  1:1887872/150‑1 (MQ=255)
                                                                       cgcgAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTtctc                                                                                >  1:404237/1‑150 (MQ=255)
                                                                            gCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAgc                                                                           >  2:2531427/1‑150 (MQ=255)
                                                                              ggAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAgcgg                                                                         <  1:3900214/150‑1 (MQ=255)
                                                                               gAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAtcggc                                                                        >  1:3624962/1‑150 (MQ=255)
                                                                                aaCACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAgcggcg                                                                       <  2:3270474/150‑1 (MQ=255)
                                                                                  cacCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCgca                                                                     <  2:3858066/150‑1 (MQ=255)
                                                                                      ggACGGGATGATTACATTACGGTTAATTCCTGAACTGTGCGGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATTAGCGAAACGCATCCGACATTACTCTGATTAAGACTTCGTAGATTTCTCAAATCGGCGCAGCaa                                                                 <  2:4126988/150‑1 (MQ=255)
                                                                                       gACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAAc                                                                <  2:5595357/150‑1 (MQ=255)
                                                                                          gggATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGa                                                             <  1:3736275/150‑1 (MQ=255)
                                                                                           ggATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGAt                                                            <  1:1362423/150‑1 (MQ=255)
                                                                                              tgatgaCATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTc                                                         <  2:896953/150‑1 (MQ=255)
                                                                                               gatgaCATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTACGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCACAGCGGCGCAGCACCGGATTTcc                                                        >  2:4876228/1‑150 (MQ=255)
                                                                                                 tgaCATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCAc                                                      >  1:4539132/1‑150 (MQ=255)
                                                                                                  gaCATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACg                                                     <  2:1448135/150‑1 (MQ=255)
                                                                                                     aTTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTc                                                  >  2:4655061/1‑150 (MQ=255)
                                                                                                      ttACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTAGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCa                                                 >  1:697069/1‑150 (MQ=255)
                                                                                                      ttACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGAGTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCa                                                 >  2:211256/1‑150 (MQ=255)
                                                                                                          ggTTAATTCCTGATCTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGATACGCATCCGACATTACTCTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAAcgg                                             <  2:2875107/150‑1 (MQ=255)
                                                                                                           gTTAATTCCTGAACTGTGCCGGATGCTCTTCGATTATCCTGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCTACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAAcggc                                            <  1:2632769/150‑1 (MQ=255)
                                                                                                           gTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAAcggc                                            <  1:183507/150‑1 (MQ=255)
                                                                                                           gTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAAcggc                                            <  1:638711/150‑1 (MQ=255)
                                                                                                              aaTTCCTGAACTGTGCCGGATGCGCTTAGCTTATCCGGCCAACACGCGATGCCAGGTCAGAAAAGCGAAACCCATCCCACAATAAACAGATTAAGAATTCGTCGATTTCTAAAAGCGGCGCAGCAACAGATTTACACGCTCAACAGCGGt                                         >  1:1296909/1‑150 (MQ=255)
                                                                                                               aTTCCTGAACTGTGCCGGATTCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCAACCGACATTACACTGATTAAGAATTCGTCGAATTCTCAAAGCGGCGCACCAACAGATTTACACGCAAAACGGCGGTa                                        >  1:3460158/1‑150 (MQ=255)
                                                                                                                ttCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTAt                                       >  2:4762978/1‑150 (MQ=255)
                                                                                                                 tCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATc                                      >  2:5297319/1‑150 (MQ=255)
                                                                                                                   cTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCa                                    >  2:3500827/1‑150 (MQ=255)
                                                                                                                    tGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAg                                   >  2:2029269/1‑150 (MQ=255)
                                                                                                                         tgtgCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCct                              >  2:5171726/1‑150 (MQ=255)
                                                                                                                         tgtgCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGAATCCGACATTACACTGATTAAGACTTCGACGAATTATCAAAGCGGCGCAGCAACTGATTTCCACGCACAACGGCGGTATCCAGTGcca                              >  2:3599593/1‑149 (MQ=255)
                                                                                                                            gccggataagcgaagcgcatccggcCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCctgct                           >  1:81607‑M2/26‑150 (MQ=255)
                                                                                                                             CCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATCAGCGACACGCCTCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCctgctg                          >  2:3346952‑M1/1‑150 (MQ=255)
                                                                                                                             CCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCctgctg                          <  2:780594‑M1/150‑1 (MQ=255)
                                                                                                                               GGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCCGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCtgtg                        >  1:1182250‑M1/1‑150 (MQ=255)
                                                                                                                               GGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCtgtg                        >  2:5042103‑M1/1‑150 (MQ=255)
                                                                                                                               GGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCtgtg                        >  2:2350784‑M1/1‑150 (MQ=255)
                                                                                                                                 ATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTgtggt                      >  2:4440689‑M1/1‑150 (MQ=255)
                                                                                                                                     gcttcgcttATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGtct                  >  2:82559/1‑150 (MQ=255)
                                                                                                                                     gcttcgcttATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGtct                  >  2:2720738/1‑150 (MQ=255)
                                                                                                                                      cttcgcttATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGtctt                 <  2:4023601/150‑1 (MQ=255)
                                                                                                                                      cttcgcttATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGtctt                 <  2:1581713/150‑1 (MQ=255)
                                                                                                                                      cttcgcttATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACAGTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGtctt                 <  2:1355245/150‑1 (MQ=255)
                                                                                                                                       ttcgcttATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGtcttc                >  1:305582/1‑150 (MQ=255)
                                                                                                                                       ttcgcttATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGtcttc                >  2:586097/1‑150 (MQ=255)
                                                                                                                                               tccggcCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGTCTTCTTACCGGt        <  1:4808981‑M2/144‑1 (MQ=255)
                                                                                                                                                 cggcCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGTCTTCTTACCGGTcc      >  1:5788803‑M2/5‑150 (MQ=255)
                                                                                                                                                    cCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGTCTTCTTACCGGTCcaca   <  1:1610322‑M2/149‑1 (MQ=255)
                                                                                                                                                     cTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGTCTTCTTACCGGTCCacac  <  1:3800506/150‑1 (MQ=255)
                                                                                                                                                     cTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGTCTTCTTACCGGTCCacac  <  1:1680236/150‑1 (MQ=255)
                                                                                                                                                     cTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGTCTTCTTACCGGTCCacac  <  1:869721/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CGCCCGCAGGCCAGATAAAAAAGATAACGGTGATGATGAGCTGCGGCGCGACCAGCAGATAAGGCAGCCAGCGCGAGCGGAACACCGGACGGGATGATGACATTACGGTTAATTCCTGAACTGTGCCGGATGCGCTTCGCTTATCCGGCCTACACGCGATGCCAGGTCAGATAAGCGAAACGCATCCGACATTACACTGATTAAGACTTCGTCGATTTCTCAAAGCGGCGCAGCAACTGATTTCCACGCTCAACGGCGGTATCCAGTGCCTGCTGTGGTGTCTTCTTACCGGTCCACAC  >  NC_000913/3590809‑3591107

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.