| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1909276 | 82 (0.910) | 5 (0.060) | 4/254 | NT | 6.0% | intergenic (+112/+32) | yobH/kdgR | uncharacterized protein/KDG regulon transcriptional repressor |
| ? | NC_000913 | = 1909289 | 80 (0.960) | intergenic (+125/+19) | yobH/kdgR | uncharacterized protein/KDG regulon transcriptional repressor | |||||
TTGCCCGCTGTTACGCAAAAGCAATATCGTGGTCGATAATGGTTAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1909119‑1909276‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagaacctgtcGGAATATCAAACAGACAGGTTCTTTATTTAGCATGAGAAAAATAAAGTTGAAGGTGGCGTTATATTAAACGCGCTTGCTATAAGAGTATTTTACTCAGGAGTGAGAATCTGGTTATTTATTGCCCTTAACCATTATCGACCACGAT < NC_000913/1909289‑1909144 TTGCCCGCTGTTACGCAAAAGCAATATCGTGGTCGATAATGGTTAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAA > 2:149753/1‑149TTGCCCGCTGTTACGCAAAAGCAATATCGTGGTCGATAATGGTTAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAA < 2:812440/149‑1 CCCGCTGTTACGCAAAAGCAATATCGTGGTCGATAATGGTTAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAA < 2:460078/149‑1 CGCTGTTACGCAAAAGCAATATCGTGGTCGATAATGGTTAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACa > 1:1174367/1‑148 CTGTTACGCAAAAGCAATATCGTGGTCGATAATGGTTAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCGTATAGCAAGCGCGTTTAATATTACGCGACCTGCACCTTTAGTTTTCTCATGCTAAATAAAGAACCTG > 2:1134710/1‑149 TGTTACGCAAAAGCAATATCGTGGTCGATAATGTTTAAGTGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGT < 2:493410/149‑1 GTCGATAATGGTTAAGGGCAATAATTAACCAGATTCTAATTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGACACCTTCAACTTTATTTTTCTCTTGCTAAATAAAGAACCTGTCGGAATATCAAACAGACAGGTTa < 2:1417660/149‑2 GATAATGGTTAAGGGCAATAAATAACCAGTTTCTCACTCCTGAGTAAAATACTCTTTTAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCGGAATATCAAACAGACAGGTTCTTT < 1:227604/149‑1 TTAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCGGAATATCAAACAGACAGGTTCTTTATTTAGCA < 1:760052/149‑1 CTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCGGAATATCAAACAGACAGGTTCTTTATTTAGCATGAGAAAAATAAAGTTGAAGGTGGCGTTATA < 1:1422092/149‑1 TAAAATACTCTAATAGCAACCGCGATAAATATAACGCCACCTTCAACTTTATTTTTCTCAAGCTAAATAAAGAACCTGTCGGAATATCAAACAGACAGGATCTTTATTTAGCATGAGAAAAATAAAGTTGAAGGTGGCGTTATATTAAA < 1:974086/149‑1 AACCTGTCGGAATATCAAACAGACAGGTTCTTTATTTAGCATGAGAAAAATAAAGTTGAAGGTGGCGTTATATTAAACGCGCTTGCTATAAGAGTATTTTACTCAGGAGTGAGAATCTGGTTATTTATTGCCCTTAA > 1:666820/1‑137 AACCTGTCGGAATATCAAACAGACAGGTTCTTTATTTAGCATGAGAAAAATAAAGTTGAAGGTGGCGTTATATTAAACGCGCTTGCTATAAGAGTATTTTACTCAGGAGTGAGAATCTGGTTATTTATTGCCCTTAA < 2:666820/137‑1 ACCTGTCGGAATATCAAACAGACAGTTTCTTTATTTAGCATGAGAAAAATAAAGTTGAAGGTGGCGTTATATTAAACGCGCTTGCTATAAGAGTATTTTACTCAGGAGTGAGAATCTGGTTATTTATTGCCCTTAACCATTATCGACCA < 2:568564/149‑1 CCTGTCGGAATATCAAACAGACAGGTTCTTTATTTAGCATGAGAAAAATAAAGTTGAAGGTGGCGTTATATTAAACGCGCTTGCTATAAGAGTATTTTACTCAGGAGTGAGAATCTGGTTATTTATTGCCCTTAACCATTATCGACCAC < 1:275051/149‑1 GTCGGAATATCAAACAGACAGGTTCTTTATTTAGCATGAGAAAAATAAAGTTGAAGGTGGCGTTATATTAAACGCGCTTGCTATAAGAGTAATTTACTCAGGAGTGAGAATCTGGTTATTTATTGCCCTTAACCATTATCGACCACGAT > 2:1429343/1‑149 TTGCCCGCTGTTACGCAAAAGCAATATCGTGGTCGATAATGGTTAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1909119‑1909276‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagaacctgtcGGAATATCAAACAGACAGGTTCTTTATTTAGCATGAGAAAAATAAAGTTGAAGGTGGCGTTATATTAAACGCGCTTGCTATAAGAGTATTTTACTCAGGAGTGAGAATCTGGTTATTTATTGCCCTTAACCATTATCGACCACGAT < NC_000913/1909289‑1909144 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |