New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 190927682 (0.910)5 (0.060) 4/254 NT 6.0% intergenic (+112/+32) yobH/kdgR uncharacterized protein/KDG regulon transcriptional repressor
?NC_000913 = 1909289 80 (0.960)intergenic (+125/+19) yobH/kdgR uncharacterized protein/KDG regulon transcriptional repressor

AATATCGTGGTCGATAATGGTTAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAAACGCTCTTCAGAGAAACGCAACGTCGGGAAGGAGATGCTCAAACCGGCA  >  NC_000913/1909141‑1909437
                                                                                                                                                    |                                                                                                                                                    
aaTATCGTGGTCGATAATGGTTAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTcc                                                                                                                                                      >  1:162521/1‑149 (MQ=255)
 atatCGTGGTCGATAATGGTTAAGGGCAATAAATAACAAGATTCTAAATCCTGAGTTAAATACTCTTATAGCCAGCGCGTTTTATATATAGCAACATTCAACTTTAGTTATATCATGCTAATTAAAGAACCTGGCTGTTTGATAGTCCg                                                                                                                                                     >  2:1008679/1‑149 (MQ=255)
   atCGTGGTCGATAATGGTTAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAATTACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCgac                                                                                                                                                   >  2:1429343‑M2/1‑146 (MQ=255)
      gTGGTCGATAATGGTTAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCgacagg                                                                                                                                                <  1:275051‑M2/149‑7 (MQ=255)
       tGGTCGATAATGGTTAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAAACTGTCTGTTTGATATTCCgacaggt                                                                                                                                               <  2:568564‑M2/149‑8 (MQ=255)
            gATAATGGTTAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTa                                                                                                                                          >  1:1230597/1‑149 (MQ=255)
              tAATGGTTAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGCCAGGTTCTTAct                                                                                                                                        >  2:1001916/1‑149 (MQ=255)
              tAATGGTTAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTAct                                                                                                                                        <  2:131854/149‑1 (MQ=255)
              tAATCGGTAAGGGCAATAAAAACCCAGAATCTCACTCCTGAGTAAAATCCTCTTAAAGCACGCGCGTTTAATATAACTCCACCTGCAACTTTATTTTTCTCATGCAAAATAAAGCACCTGTCTGTTTGATATACCGACAGGTTCTTAct                                                                                                                                        <  1:1016532/149‑1 (MQ=255)
                  ggTTAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCtca                                                                                                                                    <  2:1230597/149‑1 (MQ=255)
                   gTTAAGGGAAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCtcat                                                                                                                                   <  2:551989/149‑1 (MQ=255)
                    ttAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCgacaggtt                                                                                                                                              <  2:666820‑M2/137‑9 (MQ=255)
                    ttAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCgacaggtt                                                                                                                                              >  1:666820‑M2/1‑129 (MQ=255)
                     tAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCtcatca                                                                                                                                 <  1:702676/149‑1 (MQ=255)
                        gggCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAAACTGTCTCTTTGATATTCCGACAGGTTCTTACTCTCATCAGaa                                                                                                                              >  1:305170/1‑149 (MQ=255)
                         ggCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAATCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAAc                                                                                                                             <  2:87972/149‑1 (MQ=255)
                         ggCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGacc                                                                                                                             >  1:1191087/1‑147 (MQ=255)
                         ggCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAAc                                                                                                                             <  1:887785/149‑1 (MQ=255)
                           cAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACgg                                                                                                                           <  2:1174367/149‑1 (MQ=255)
                           cAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACgg                                                                                                                           <  2:659490/149‑1 (MQ=255)
                           cAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACgg                                                                                                                           >  1:1141596/1‑149 (MQ=255)
                           cAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACgg                                                                                                                           <  1:1171017/149‑1 (MQ=255)
                            aataaataACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGAGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTTATATTCCGACAGGTTCTTACTCTCATCAGAAGGGa                                                                                                                          <  1:1028757/149‑1 (MQ=255)
                               aaataaCCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGTTAg                                                                                                                       >  1:1569201/1‑149 (MQ=255)
                               aaataaCCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAg                                                                                                                       <  2:89298/149‑1 (MQ=255)
                                 ataaCCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTc                                                                                                                     <  1:614947/149‑1 (MQ=255)
                                  taaCCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCg                                                                                                                    <  1:851273/149‑1 (MQ=255)
                                   aaCCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGt                                                                                                                   >  2:902742/1‑149 (MQ=255)
                                   aaCCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTCTCTCATCAGAACGGATAGTCGTg                                                                                                                  <  2:275051/149‑1 (MQ=255)
                                    aCCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTg                                                                                                                  >  1:7025/1‑149 (MQ=255)
                                    aCCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTg                                                                                                                  <  1:1448751/149‑1 (MQ=255)
                                    aCCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTg                                                                                                                  >  2:267610/1‑149 (MQ=255)
                                     ccAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTAAGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGa                                                                                                                 >  1:539070/1‑149 (MQ=255)
                                         tttCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCAGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAAc                                                                                                             <  2:1502202/148‑1 (MQ=255)
                                               aCTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCAttt                                                                                                       >  2:981988/1‑149 (MQ=255)
                                               aCTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCAttt                                                                                                       <  1:818129/149‑1 (MQ=255)
                                                cTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTg                                                                                                      <  2:349494/149‑1 (MQ=255)
                                                cTCCTGAGTAAAATACTCATATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTAATTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTg                                                                                                      <  2:898197/149‑1 (MQ=255)
                                                 tCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTgg                                                                                                     <  1:342174/149‑1 (MQ=255)
                                                  ccTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTggg                                                                                                    <  1:988401/149‑1 (MQ=255)
                                                  ccTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTAACTCTCATCAGAACGGATAGTCGTGATAACCCATTTggg                                                                                                    >  2:245738/1‑149 (MQ=255)
                                                          aaaTACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTGTTACTATCATCAGAACGAATAGTCTTGATAAACAATTTGGGCAGaatat                                                                                            >  2:296021/1‑146 (MQ=255)
                                                          aaaTACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAAtt                                                                                            >  2:156555/1‑149 (MQ=255)
                                                          aaaTACTCTTACAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATa                                                                                                                        >  1:308509/1‑121 (MQ=255)
                                                          aaaTACTCTTACAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATa                                                                                                                        <  2:308509/121‑1 (MQ=255)
                                                             tACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTg                                                                                         <  1:1196385/149‑1 (MQ=255)
                                                                tctTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTgcgc                                                                                      >  1:1229144/1‑149 (MQ=255)
                                                                  ttATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTTATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTgcgcgc                                                                                    <  1:1244628/149‑1 (MQ=255)
                                                                  ttATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTGCGACAGGTTGTTACTCTCATCTGAACGGATAGTGGTGATAACCCATTTGGGCATAAATTTTgcgcgg                                                                                    >  2:397885/1‑148 (MQ=255)
                                                                  ttATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTgcgcgc                                                                                    >  1:1216918/1‑149 (MQ=255)
                                                                  ttATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTgcgcgc                                                                                    >  1:1539589/1‑149 (MQ=255)
                                                                  ttATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTgcgcgc                                                                                    >  2:381043/1‑149 (MQ=255)
                                                                      tgCAAGCGCGTATAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCTGAAATTTTGCGCGCTGCg                                                                                <  1:296021/148‑1 (MQ=255)
                                                                      aGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCg                                                                                <  2:1538637/149‑1 (MQ=255)
                                                                      aGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAAAAAAGAACCTGGCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCg                                                                                <  1:657111/149‑1 (MQ=255)
                                                                      aGCAAGCGCGTTAAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCg                                                                                <  2:1308548/149‑1 (MQ=255)
                                                                       gCAAGCGCGAATAATATAACGCCACCTTCAACTTAATTTTACTAATGCTAAATAAAGAACCTGACTGTTTGATAAACCGACAGGTTCTTACTCTCATCAGAACGGATAGACGAGATAACCCATATGGGCAGAAAATTTGCGCGCAGCgg                                                                               >  1:516028/1‑149 (MQ=255)
                                                                           gcgcGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATg                                                                           >  1:996321/1‑149 (MQ=255)
                                                                            cgcgTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGACAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGc                                                                          <  2:946234/149‑1 (MQ=255)
                                                                                tttAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGATCCTGTCTGTTTGATATTCCgacaggttctttatttagcttgagaaaaataaagttgaaggtggcgttatatttatcgcggttgctattagagtatttta                                                                      <  1:974086‑M2/149‑81 (MQ=255)
                                                                                   aaTATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTg                                                                   >  2:815798/1‑149 (MQ=255)
                                                                                     tataACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCgacaggttctttatttagcatgagaaaaataaagttgaaggtggcgttatattaaacgcgcttgctataagagtattttactcag                                                                 <  1:1422092‑M2/149‑86 (MQ=255)
                                                                                             cACCTTCAACTTTATTTTTCTCATGCTAAATAAATAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTc                                                         <  2:1216918/149‑1 (MQ=255)
                                                                                             cACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTc                                                         <  2:1539589/149‑1 (MQ=255)
                                                                                               ccTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCt                                                       <  1:1311501/149‑1 (MQ=255)
                                                                                                cTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTg                                                      >  1:1527783/1‑149 (MQ=255)
                                                                                                    aaCTTTATTTTTCTCATGCTAACTAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTaaa                                                  <  1:149003/149‑1 (MQ=255)
                                                                                                      cTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAAACg                                                <  1:149753/149‑1 (MQ=255)
                                                                                                      cTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAAACg                                                <  2:1229144/149‑1 (MQ=255)
                                                                                                      cTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAAACg                                                <  2:197926/149‑1 (MQ=255)
                                                                                                           tttttCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAAACGCTCtt                                           >  2:1260329/1‑149 (MQ=255)
                                                                                                             tatctcATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGAGAGGTTATTACTCTCATCAGAACGGTTAGTCGTGATAACCCATTTGGGCAGTTATTTTGCGCGCTGCGGTATGCTACATTGCGACATATTCCTGTAAACGCTCTTCa                                         <  1:859838/147‑1 (MQ=255)
                                                                                                                    tGCTAAATAAAGAACCTGTCTGTTTGATATTCCgacaggttctttatttagcatgagaaaaataaagttgaaggtggcgttatattaaacgcgcttgctataagagtattttactcaggagtgagaatctggttatttattgcccttaa                                  <  1:760052‑M2/149‑117 (MQ=255)
                                                                                                                     gCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAAACGCTCTTCAGAGAAACg                                 >  2:114054/1‑149 (MQ=255)
                                                                                                                      cTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAAACGCTCTTCAGAGAAACGc                                >  2:1343926/1‑149 (MQ=255)
                                                                                                                       taaataaaGAACCTGTCTGATTCATCTTCCGACACGTTCTTACTCTCATCAGAACGGATAGACGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTCCGACATATTCCTGTAAACGCTCTTCAGAGAAACGCa                               <  2:397660/149‑1 (MQ=255)
                                                                                                                        aaataaaGAACCTGTCTGTTTGATATTCCGACATGTTCTAACTCTCATCAGAACGGAAAGTCTTGATAACCCATTTGGGCATAAATTTTGCTCGCTGCGGTATGAAACATTGCGACATATTCCTGTAAACGCTCTTAAGAGAAACGaaa                              >  1:144679/1‑149 (MQ=255)
                                                                                                                        aaataaaGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAAACGCTCTTCAGAGAAACGCaa                              >  1:79402/1‑149 (MQ=255)
                                                                                                                         aataaaGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAAACGCTCTTCAGAGAAACGCAAc                             >  1:1250005/1‑149 (MQ=255)
                                                                                                                            aaaGAACCTGTCTGTTTGATATTCCgacaggttctttatttagcatgagaaaaataaagttgaaggtggcgttatattaaacgcgcttgctaaaagagtattttactcaggagtgagaaactggttatttattgcccttaaccattatc                          <  1:227604‑M2/149‑125 (MQ=255)
                                                                                                                              aGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAAACGCTCTTCAGAGAAACGCAACGTCgg                        >  1:202523/1‑149 (MQ=255)
                                                                                                                               taacCTGTCTGTTTGATATTCCgacaggttctttatttagcaagagaaaaataaagttgaaggtgtcgttatattaaacgcgcttgctataagagtattttactcaggaattagaatctggttaattattgcccttaaccattatcgac                       <  2:1417660‑M2/148‑128 (MQ=255)
                                                                                                                               gAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCAATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAAACGCTCTTCAGAGAAACGCAACGTCggg                       >  1:1378699/1‑149 (MQ=255)
                                                                                                                                aaCCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCAGTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAAACGCTCTTCAGAGAAACGCAACGTCGGGa                      <  1:716004/149‑1 (MQ=255)
                                                                                                                                 aCCTGTGTGTGTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAAACGCTCTTCAGAGAAACGCAACGTCGGGaa                     <  1:1008679/149‑1 (MQ=255)
                                                                                                                                 aCCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAAACGCTCTTCAGAGAAACGCAACGTCGGGaa                     >  1:596445/1‑149 (MQ=255)
                                                                                                                                 aCCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAAACGCTCTTCAGAGAAACGCAACGTCGGGaa                     >  2:381329/1‑149 (MQ=255)
                                                                                                                                   ctttctgtTTGATATTCCGACAGGTTCTTACTCTCATCAGAACTGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAAACGCTCTTCAGAGAAACGCAACGTCGGGAAgg                   <  2:1155106/146‑1 (MQ=255)
                                                                                                                                     gtctgtTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCACCATTGAGACATATTCCTGTAAACGCTCTTCAGAGAACCGCAACTTCGGGAAGgac                 >  2:191214/1‑148 (MQ=255)
                                                                                                                                     gtctgtTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAAACGCTCTTCAGAGAAACGCAACGTCGGGAAGgag                 <  2:996321/149‑1 (MQ=255)
                                                                                                                                        tgtTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAAACGCTCTTCAGAGAAACGCAACGTCGGGAAGGAGATg              >  2:610284/1‑149 (MQ=255)
                                                                                                                                        tgtTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGGGATAACCCATTTGGGCAGAAATTTTGCGCGCGGCGGTATGCAACATTGCGACATATTCCTGTAAACGCTCTTCAGAGAAACGCAACGTCGGGAAGGAGATg              <  1:381370/149‑1 (MQ=255)
                                                                                                                                         gtTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAAACGCTCTTCAGAGAAACGCAACGTCGGGAAGGAGATGc             <  1:381043/149‑1 (MQ=255)
                                                                                                                                         gtTTGATATACCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAAACGCTCTTCAGAGAAACGCAACGTCGGGAAGGAGATGc             <  2:1191087/149‑1 (MQ=255)
                                                                                                                                          tttGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAACCGCTCTTCAGAGAAACGCAACGTCGGGAAGGAGATGCt            >  1:1206246/1‑149 (MQ=255)
                                                                                                                                          tttGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTCCGGTATGCAACATTGCGACATATTCCCGTAAACGCACTTCAGAGAAACGCAACGTCGGGAAGGAGATGCt            >  1:578861/1‑149 (MQ=255)
                                                                                                                                                atTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTAGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAAACGCTCTTCAGAGAAACGCAACTTCGGGAAGGAGATGCTCAAAcc      >  1:1464897/1‑149 (MQ=255)
                                                                                                                                                  tCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAAACGCTCTTCAGAGAAACGCAACGTCGGGAAGGAGATGCTCAAACCgg    <  1:114054/149‑1 (MQ=255)
                                                                                                                                                   ccGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTTATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAAACGCTCTTCAGAGAAACGCAACGTCGGGAAGGAGATGCTCAAACCGGc   <  2:104747/149‑1 (MQ=255)
                                                                                                                                                    cGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAAACGCTCTTCAGAGAAACGCAACGTCGGGAAGGAGATGCTCAAACCGGCa  >  1:1142011/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
AATATCGTGGTCGATAATGGTTAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATATAACGCCACCTTCAACTTTATTTTTCTCATGCTAAATAAAGAACCTGTCTGTTTGATATTCCGACAGGTTCTTACTCTCATCAGAACGGATAGTCGTGATAACCCATTTGGGCAGAAATTTTGCGCGCTGCGGTATGCAACATTGCGACATATTCCTGTAAACGCTCTTCAGAGAAACGCAACGTCGGGAAGGAGATGCTCAAACCGGCA  >  NC_000913/1909141‑1909437

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.