BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	5565 =	NA (NA)	3 (0.030)	3/262	NT	NA	noncoding (1/105 nt)	RIP1 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP1 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
*	?	NC_000913	5597 =	NA (NA)	3 (0.030)	3/262	NT	NA	noncoding (33/105 nt)	RIP1 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP1 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 115 total aligned reads displayed.

GAATGGCGAGGCAATCGCTGGCACCTACACGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCA  >  NC_000913/5417‑5711

tctttgatgaagattcctccagcaatggcgaactggtgtttaaacgctacgagcagcgttaagtttgcagtcaatgccggatgcggcgtgaacgccttatcctgcctacaaaagcatgcagattcaatatattgcagaattaacgtagg                                                                                                                                                    >  2:1551568‑M1/149‑149 (MQ=255)

gAATGGCGAGGCAATCGCTGGCACCTACACGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACCTCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAgcg                                                                                                                                                    >  1:954886/1‑149 (MQ=255)

 actGGCGAGGCAATCGCTGGCACCTACACGTACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCTGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAgcgc                                                                                                                                                   <  1:326797/147‑1 (MQ=255)

  tttgatgaagattcctccagcaatggcgaactggtgtttaaacgctacgagcagcgttaagtttgcagtcaatgccggatgcggcgtgaacgccttatcctgccttcaaaagcatgcagattcaatatattgcagaattaacttagGcc                                                                                                                                                  <  1:1245709‑M1/3‑1 (MQ=255)

   ttcatcaagattcctccagcaatggcgaactcgtgtttaaacgatacgagcagagttaagtttgcagtcaatgccggatgcggcgtgaacgccttatcctgcctacaaaagcatgcagattcaatatattgcagaattaacgtagGCCt                                                                                                                                                 >  2:848030‑M1/146‑149 (MQ=255)

   tGGCGCGGCAATCGCTGGCCCCTACACGGACCGCCGCCACCGCCGCGCCCCCATAAGACAGCTCCTCATGATCATCACGGCGGTCAGGGTCCCGGCACCCCTCACCGCTAAATGACAACGGCCGGGGACCAAGCCGGCCTTCAGCGccg                                                                                                                                                 >  1:365403/1‑148 (MQ=255)

   tGGCGAGGCAATCGCTGGCACCTACACGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCt                                                                                                                                                 <  1:215362/149‑1 (MQ=255)

   tGGCGAGGCAATCGCTGGCACCTACACGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCt                                                                                                                                                 <  2:358804/149‑1 (MQ=255)

     gatgaagattcctccagcaatggcgaactggtgtttaaacgctacgagcagcgttaagtttgcagtcaaagccggatgcggcgtgaacgccttatcctgcctacaaaagcatgcagattcaatatattgcagaattaacgtagGCCTGa                                                                                                                                               <  1:788103‑M1/6‑1 (MQ=255)

     gCGAGGCAATCGCTGGCACCTACACGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGa                                                                                                                                               <  1:807956/149‑1 (MQ=255)

     gCGAGGCAATCGCTGGCACCTACACGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCAGGGTCCAGGCAAACATCCCCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGa                                                                                                                                               >  1:215828/1‑149 (MQ=255)

      atgaatattcctccagcaatggcgaactggtgtttaaacgctacgatcagcgttaagtttgcagtcaatgccggatgctgcgtgaacgccttatcctgcctacaaaatcatgcagtttcaatatattgcagaattaacgtagGCCTGAt                                                                                                                                              >  1:959490‑M1/143‑149 (MQ=255)

      atgaagattcctccagcaatggcgaactggtgtttaaacgctacgagcagcgttaagtttgcagtcaatgccggatgcggcgtgaacgccttatcctgcctacaaaagcatgcagattcaatatattgcagaattaacgtagGCCTGAt                                                                                                                                              <  2:36561‑M1/7‑1 (MQ=255)

      atgaagattcctccagcaatggcgaactggtgtttaaacgctacgagcagcgttaagtttgcagtcaatgccggatgcggcgtgaacgccttatcctgcctacaaaagcatgcagattcaatatattgcagaattaacgtagGCCTGAt                                                                                                                                              <  2:78312‑M1/7‑1 (MQ=255)

            aaTCGCTGGCACCTACACGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAGCATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACg                                                                                                                                        >  2:1116838/1‑149 (MQ=255)

                   gccacaTACACGCACCGCCTACACCGCCGCCTCACGAGAAGACATCTCAACATGAGCAACTCCGCGGACATGGGCCAGGCAAACATCCCCGCTAAAGGACACATGCCGGGTACCAATCCGGCATTCAGCGCCTGATGCGACGCTGgcgc                                                                                                                                 <  2:1457659/147‑1 (MQ=255)

                    gCACCTACACGGCCCGCCGCCACCGCCGCGCCACCAGAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGGCCAGGCAGACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGCCGCTGGcgcg                                                                                                                                >  2:1026824/1‑149 (MQ=255)

                      aCCTACACGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTc                                                                                                                              <  1:1291279/149‑1 (MQ=255)

                        cTACACGGACCGCCGCCACCGCCGCGCCCCCATAAGAAAGCTCCGCAAGATCATCACGGCGGTCATGGTCCAGGCAAACATCCCCGCTAAATGCCAAAAGCCGGGTCACACTCCGGCATTCAGCGCCTGCTGCGACGCTGTCGCGTCtg                                                                                                                            >  1:856310/1‑148 (MQ=255)

                         tACACGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTa                                                                                                                           <  1:345191/149‑1 (MQ=255)

                          acacGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCAGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTAt                                                                                                                          <  2:818670/149‑1 (MQ=255)

                           cacGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCACGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATc                                                                                                                         >  1:667101/1‑149 (MQ=255)

                            cgaactggtggttaaacgctacgagcagcgttaagtttgcagtcaatgccggatgcggcgtgaacgccttatcctgcctacaaaagcatgcagattcaatatattgcagaattaacgtagGCCTGATGCGACGCTGGCGCGTCTTATCa                                                                                                                        >  2:1378024‑M1/121‑149 (MQ=255)

                            acGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCa                                                                                                                        >  2:590785/1‑149 (MQ=255)

                             cGGACCGCCGCCAGCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAg                                                                                                                       <  1:588340/149‑1 (MQ=255)

                              ggACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAACTGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAgg                                                                                                                      <  1:974953/149‑1 (MQ=255)

                               gACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGGCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATAAGACGCGCCAGCGTCGCATCAGGc                                                                                                                     <  1:725793/149‑1 (MQ=255)

                                aCCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATAAGACGCGCCAGCGTCGCATCAGGcg                                                                                                                    <  1:1325567/149‑2 (MQ=255)

                                 ccgccgCCCCCGCCGCGCCACCAAAACTAACCGCCCCATTATCCTCCCGGGCGGCCTGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATAAGACGCGCCAGCGTCGCATCAGGcgc                                                                                                                   <  1:477985/149‑3 (MQ=255)

                                  cgccgcCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCTTTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTa                                                                                                                  <  1:392808/149‑1 (MQ=255)

                                    ccgccACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAAAAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACg                                                                                                                >  2:788103/1‑149 (MQ=255)

                                         aCCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAAt                                                                                                           <  2:742741/149‑1 (MQ=255)

                                         aCCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAAt                                                                                                           <  1:1108072/149‑1 (MQ=255)

                                          ccgccgCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAAtt                                                                                                          <  2:581332/149‑1 (MQ=255)

                                          ccgccgCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAAtt                                                                                                          <  1:1215376/149‑1 (MQ=255)

                                           cgccgcGCCACCATAAGAAAGCTCCTCATGATCATCACGTCGGTCATGGTCCAGCCAAACATCACCGCTAAATAACAAATGCCCGGAACCAATAATGCATTCAGCGCCTGATGCGACGATGGCGCGTCTTAACAGGACTACgaaaatac                                                                                                         >  2:839174/1‑142 (MQ=255)

                                            gccgcGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGCCGCTGGCGCGTCTTATCAGGCCTACGTTAATTCt                                                                                                        >  1:1469819/1‑149 (MQ=255)

                                            gccgcGCCACCATAAGAAAGCTCCACATGATCAACACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACACTCCGGCATTCAGCGCCTGATGCTCCGCTGGCGCGTCTAATCAGGCCTCCGGTAATTCt                                                                                                        >  2:910065/1‑149 (MQ=255)

                                             gctacgagcagcgttaagtttgcagtcaatgccggatgcggcgtgaacgccttatcctgcctacaaaagcatgcagattcaatatattgcagaattaacgtagGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTg                                                                                                       >  1:14375‑M1/104‑149 (MQ=255)

                                             ccgcGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTg                                                                                                       <  1:669918/149‑1 (MQ=255)

                                             ccgcGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTg                                                                                                       <  2:1566688/149‑1 (MQ=255)

                                              cgcgCCACCATAAGATAGCTCCTCATGATCATCTCGGCGGTCATGGGCCAGGCAAACTTCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGc                                                                                                      <  1:418320/149‑1 (MQ=255)

                                                cgcCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCaa                                                                                                    >  2:1438974/1‑149 (MQ=255)

                                                   aaccaTAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCAACGCTAAATGACAAATGCCGTGTAACAATCCGGCATTCAGCGCCTGATGCGAAGCTGGCGCGTCTTTTCATGCCTACGTTAATTCTGCAatat                                                                                                 <  2:174182/148‑1 (MQ=255)

                                                     ccaTAATAAAGCTCCTCATGATTATCTCTGCGTGAATGGTCGAGGCAAACATCACCGCTTTATGACTAATGCAGGGTAAAAATCCGGCATTCAGAGCCTGATGCGAAGCTGGCGCGTCTTATCAGGGCTACGTTAATTCTGCAatatat                                                                                               <  2:1021548/149‑1 (MQ=255)

                                                     ccaTAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAatatat                                                                                               <  2:325423/149‑1 (MQ=255)

                                                      caTACGAAAGCTCCTCATGAGTATCACGGCGGTCATGGTCCAGGCAACCATCACCGATAAATGACAAATGCCGGGGACCAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGAGTCTTATCAGGCCTACGTTAATTCTGAAATATAtt                                                                                              <  2:365403/149‑1 (MQ=37)

                                                      caTAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGGATTCCGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATAtt                                                                                              >  1:702928/1‑149 (MQ=255)

                                                      caTAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATAtt                                                                                              <  2:1254572/149‑1 (MQ=255)

                                                      caTAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATAtt                                                                                              >  2:653310/1‑149 (MQ=255)

                                                        tAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCGACGTTAATTCTGCAATATATTGa                                                                                            >  1:1009875/1‑149 (MQ=255)

                                                         aaGAAAGCTCCTCATGTTCATCTCGGCGGTCATTGTCATGGCAAACTTCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGAGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGaa                                                                                           <  2:1257209/149‑1 (MQ=38)

                                                         aaGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGaa                                                                                           >  1:1261428/1‑149 (MQ=255)

                                                         aaGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGaa                                                                                           <  2:1160817/149‑1 (MQ=255)

                                                         aaGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGaa                                                                                           >  1:335751/1‑149 (MQ=255)

                                                         aaGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGaa                                                                                           >  1:533851/1‑149 (MQ=255)

                                                         aaGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAAAGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGGATTATCAGGCCTACGTTAATTCTGCAATAAATTGaa                                                                                           >  1:927604/1‑149 (MQ=255)

                                                            aaaGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCCGGCCTACTTTAATTCTGCAATATATTGAATCt                                                                                        >  1:1552470/1‑149 (MQ=255)

                                                            aaaGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCt                                                                                        <  2:497575/149‑1 (MQ=255)

                                                             aaGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCAGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTg                                                                                       <  1:1072554/149‑1 (MQ=255)

                                                              gtttgcagtcactgccggatgcggcgtgaacgccttatcctgcctacaaaagcatgcagattcaatatattgcagaattaacgtagGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGc                                                                                      >  2:925388‑M1/87‑149 (MQ=255)

                                                              aGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGTCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGc                                                                                      <  1:289002/149‑1 (MQ=255)

                                                                 tcatcATGATAATAACTGCTTTCATGGTCCAGGCAAACATCACCGCTAAATTACAAATGCCGTGTAACAATCCTGCATTCAGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATg                                                                                   <  1:1029072/146‑1 (MQ=37)

                                                                     cATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCttt                                                                               >  1:394251/1‑149 (MQ=255)

                                                                            atcaCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGc                                                                        <  2:829365/149‑1 (MQ=255)

                                                                            atcaCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGc                                                                        >  2:747188/1‑149 (MQ=255)

                                                                              caCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAg                                                                      <  1:1398840/149‑1 (MQ=255)

                                                                                             ccAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCATACGTTAATTCTGAAAAAAATTGAATCTGAATGCTTTTCTAGGCAGGATAAGGCGTTCAcg                                                       >  2:1470036/1‑149 (MQ=38)

                                                                                                ggCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCTACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCAcgccg                                                    >  2:1340020/1‑149 (MQ=255)

                                                                                                   aaaCATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCCCGCCGCAt                                                 >  2:318084/1‑149 (MQ=255)

                                                                                                       aTCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCgg                                             <  1:590785/149‑1 (MQ=255)

                                                                                                        taatcgatAAATGACAATTGCCTGTTAACAATCCGTCATTCAGCGCCTTATGCGACGCTGGCGAGTCTTATCAGGCCTACGTTAATTATGCAATATATTGAATCTGCATGCTTTTGTATGCAGGATAAGGCGTTCACGCCGCATCCGGc                                            <  2:1452675/142‑1 (MQ=25)

                                                                                                          aCCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCAt                                          >  1:585454/1‑149 (MQ=255)

                                                                                                              cTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCAAGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGAc                                      <  2:613329/149‑1 (MQ=255)

                                                                                                                aaaTGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTg                                    >  1:869622/1‑149 (MQ=255)

                                                                                                                    taCAAATGCCGGGTAACCATACGGCATTCAGAGCCTGATGAGACGCTGGCGGGTCTTATCAGGCATACGGTAATTCTGCAATATATTGTATCTGCATGCTTTTGTTGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCaaa                                <  1:839174/148‑1 (MQ=25)

                                                                                                                     aCAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAAc                               >  1:1004709/1‑149 (MQ=255)

                                                                                                                     aCAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAAc                               >  2:1512392/1‑149 (MQ=255)

                                                                                                                       aaaTGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGGATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACtt                             >  1:21646/1‑149 (MQ=255)

                                                                                                                       aaaTGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACtt                             >  1:1448318/1‑149 (MQ=255)

                                                                                                                       aaaTGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACtt                             >  1:12379/1‑149 (MQ=255)

                                                                                                                         aagCCGGGGAACAATCCGGCATTCAGCGACTGATGCGACGCTGGCGCGTCTTATCAGGCAGACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTaa                           <  2:856310/147‑1 (MQ=255)

                                                                                                                         aTGCCGGGTAACAATCCGGCATTCAGCGCCGGATGCGAAGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTaa                           <  2:336952/149‑1 (MQ=255)

                                                                                                                            ccGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACgc                        >  1:817263/1‑149 (MQ=255)

                                                                                                                             cGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTACCgct                       >  1:1426047/1‑149 (MQ=255)

                                                                                                                              gggTAACATTCCGGAATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCTGGCCTACGTTAATTCTGCTATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACgctg                      <  1:910065/149‑1 (MQ=255)

                                                                                                                              gggTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCGACGTTAAATCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACgctg                      <  2:1392168/149‑1 (MQ=255)

                                                                                                                                gTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACgctgct                    >  2:506770/1‑149 (MQ=255)

                                                                                                                                 tAACAATCGGGAATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTc                   <  2:1552470/149‑1 (MQ=255)

                                                                                                                                 tAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCTTCCGGCATTGACTGCAAACTTAACGCTGCTc                   >  1:1466602/1‑149 (MQ=255)

                                                                                                                                       tCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCg             >  1:1031396/1‑149 (MQ=255)

                                                                                                                                        ccGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGt            <  1:1116838/149‑1 (MQ=255)

                                                                                                                                         cGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGtt           >  1:952335/1‑149 (MQ=255)

                                                                                                                                         cGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGtt           >  2:597469/1‑149 (MQ=255)

                                                                                                                                             aTTCAGCGCCTTATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTaaa       <  2:183448/149‑1 (MQ=255)

                                                                                                                                              ttCAGCGCCTGATGCGCCGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAac      >  2:903559/1‑149 (MQ=255)

                                                                                                                                               tCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATGAGGCGGTCACGCGGCATCCGGGAGGGACCGCAAACTTTACGCTGCGCGTGGCGGTTGAacc     >  2:1451990/1‑148 (MQ=25)

                                                                                                                                                 aGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGGTTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAGCGCTGCTCGTAGCGTTTAAACAcc   >  1:436308/1‑149 (MQ=255)

                                                                                                                                                 aGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACAcc   >  1:772803/1‑149 (MQ=255)

                                                                                                                                                 aGCGCCTGAAGCGAAGCTGGCGCGTATTATCAGGCCTACGTTAATTCTGCAATATATTTAATCTGCATGCTTTTCTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACAcc   <  2:927604/149‑1 (MQ=37)

GAATGGCGAGGCAATCGCTGGCACCTACACGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCA  >  NC_000913/5417‑5711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.