BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	5565 =	NA (NA)	3 (0.030)	3/262	NT	NA	noncoding (1/105 nt)	RIP1 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP1 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
*	?	NC_000913	5597 =	NA (NA)	3 (0.030)	3/262	NT	NA	noncoding (33/105 nt)	RIP1 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP1 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 121 total aligned reads displayed.

CGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTTCATCAAAGAA  >  NC_000913/5451‑5745

cgccgcCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCTTTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTa                                                                                                                                                    <  1:392808/149‑1 (MQ=255)

  ccgccACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAAAAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACg                                                                                                                                                  >  2:788103/1‑149 (MQ=255)

   cgccACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGt                                                                                                                                                 <  2:1459281/149‑1 (MQ=255)

       aCCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAAt                                                                                                                                             <  1:1108072/149‑1 (MQ=255)

       aCCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAAt                                                                                                                                             <  2:742741/149‑1 (MQ=255)

        ccgccgCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAAtt                                                                                                                                            <  2:581332/149‑1 (MQ=255)

        ccgccgCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAAtt                                                                                                                                            <  1:1215376/149‑1 (MQ=255)

         cgccgcGCCACCATAAGAAAGCTCCTCATGATCATCACGTCGGTCATGGTCCAGCCAAACATCACCGCTAAATAACAAATGCCCGGAACCAATAATGCATTCAGCGCCTGATGCGACGATGGCGCGTCTTAACAGGACTACgaaaatac                                                                                                                                           >  2:839174/1‑142 (MQ=255)

           gctacgagcagcgttaagtttgcagtcaatgccggatgcggcgtgaacgccttatcctgcctacaaaagcatgcagattcaatatattgcagaattaacgtagGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTg                                                                                                                                         >  1:14375‑M1/104‑149 (MQ=255)

            cgcgCCACCATAAGATAGCTCCTCATGATCATCTCGGCGGTCATGGGCCAGGCAAACTTCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGc                                                                                                                                        <  1:418320/149‑1 (MQ=255)

                 aaccaTAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCAACGCTAAATGACAAATGCCGTGTAACAATCCGGCATTCAGCGCCTGATGCGAAGCTGGCGCGTCTTTTCATGCCTACGTTAATTCTGCAatat                                                                                                                                   <  2:174182/148‑1 (MQ=255)

                   ccaTAATAAAGCTCCTCATGATTATCTCTGCGTGAATGGTCGAGGCAAACATCACCGCTTTATGACTAATGCAGGGTAAAAATCCGGCATTCAGAGCCTGATGCGAAGCTGGCGCGTCTTATCAGGGCTACGTTAATTCTGCAatatat                                                                                                                                 <  2:1021548/149‑1 (MQ=255)

                    caTACGAAAGCTCCTCATGAGTATCACGGCGGTCATGGTCCAGGCAACCATCACCGATAAATGACAAATGCCGGGGACCAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGAGTCTTATCAGGCCTACGTTAATTCTGAAATATAtt                                                                                                                                <  2:365403/149‑1 (MQ=37)

                    caTAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGGATTCCGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATAtt                                                                                                                                >  1:702928/1‑149 (MQ=255)

                    caTAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATAtt                                                                                                                                >  2:653310/1‑149 (MQ=255)

                    caTAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATAtt                                                                                                                                <  2:1254572/149‑1 (MQ=255)

                      tAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCGACGTTAATTCTGCAATATATTGa                                                                                                                              >  1:1009875/1‑149 (MQ=255)

                       aaGAAAGCTCCTCATGTTCATCTCGGCGGTCATTGTCATGGCAAACTTCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGAGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGaa                                                                                                                             <  2:1257209/149‑1 (MQ=38)

                       aaGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGaa                                                                                                                             >  1:1261428/1‑149 (MQ=255)

                       aaGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGaa                                                                                                                             >  1:533851/1‑149 (MQ=255)

                       aaGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGaa                                                                                                                             >  1:335751/1‑149 (MQ=255)

                       aaGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGaa                                                                                                                             <  2:1160817/149‑1 (MQ=255)

                          aaaGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCCGGCCTACTTTAATTCTGCAATATATTGAATCt                                                                                                                          >  1:1552470/1‑149 (MQ=255)

                          aaaGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCt                                                                                                                          <  2:497575/149‑1 (MQ=255)

                            gtttgcagtcactgccggatgcggcgtgaacgccttatcctgcctacaaaagcatgcagattcaatatattgcagaattaacgtagGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGc                                                                                                                        >  2:925388‑M1/87‑149 (MQ=255)

                            aGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGTCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGc                                                                                                                        <  1:289002/149‑1 (MQ=255)

                               tcatcATGATAATAACTGCTTTCATGGTCCAGGCAAACATCACCGCTAAATTACAAATGCCGTGTAACAATCCTGCATTCAGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATg                                                                                                                     <  1:1029072/146‑1 (MQ=37)

                                  tcATGATCATCACGGCGGTCAAGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCtt                                                                                                                  <  2:667101/149‑1 (MQ=255)

                                   cATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCttt                                                                                                                 >  1:394251/1‑149 (MQ=255)

                                     tGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTg                                                                                                               <  1:983976/149‑1 (MQ=255)

                                       ttcatcaCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTa                                                                                                             <  2:197452/148‑1 (MQ=255)

                                          atcaCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGc                                                                                                          <  2:829365/149‑1 (MQ=255)

                                            caCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAg                                                                                                        <  1:1398840/149‑1 (MQ=255)

                                              cggcggTCATGGTCAAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGa                                                                                                      <  1:561277/149‑1 (MQ=255)

                                                           ccAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCATACGTTAATTCTGAAAAAAATTGAATCTGAATGCTTTTCTAGGCAGGATAAGGCGTTCAcg                                                                                         >  2:1470036/1‑149 (MQ=38)

                                                             aGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCAcgcc                                                                                       >  1:1180323/1‑149 (MQ=255)

                                                              ggCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCTACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCAcgccg                                                                                      >  2:1340020/1‑149 (MQ=255)

                                                                 aaaCATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCCCGCCGCAt                                                                                   >  2:318084/1‑149 (MQ=255)

                                                                     aTCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCgg                                                                               <  1:590785/149‑1 (MQ=255)

                                                                      taatcgatAAATGACAATTGCCTGTTAACAATCCGTCATTCAGCGCCTTATGCGACGCTGGCGAGTCTTATCAGGCCTACGTTAATTATGCAATATATTGAATCTGCATGCTTTTGTATGCAGGATAAGGCGTTCACGCCGCATCCGGc                                                                              <  2:1452675/142‑1 (MQ=25)

                                                                        aCCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCAt                                                                            >  1:585454/1‑149 (MQ=255)

                                                                            cTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCAAGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGAc                                                                        <  2:613329/149‑1 (MQ=255)

                                                                              aaaTGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTg                                                                      >  1:869622/1‑149 (MQ=255)

                                                                                  taCAAATGCCGGGTAACCATACGGCATTCAGAGCCTGATGAGACGCTGGCGGGTCTTATCAGGCATACGGTAATTCTGCAATATATTGTATCTGCATGCTTTTGTTGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCaaa                                                                  <  1:839174/148‑1 (MQ=25)

                                                                                   gcagattcaatatattgcagaattaacgtaggcctgataagacgcgccagcgtcgcatcaggcCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCAGTGACTGCAAAc                                                                 >  2:925388‑M2/64‑149 (MQ=255)

                                                                                   aCAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAAc                                                                 >  2:1512392/1‑149 (MQ=255)

                                                                                   aCAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAAc                                                                 >  1:1004709/1‑149 (MQ=255)

                                                                                     aaaTGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGGATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACtt                                                               >  1:21646/1‑149 (MQ=255)

                                                                                     aaaTGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACtt                                                               >  1:212200/1‑149 (MQ=255)

                                                                                     aaaTGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACtt                                                               >  1:1448318/1‑149 (MQ=255)

                                                                                     aaaTGCCGGGTAACAATCCCGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACtt                                                               <  1:863500/149‑1 (MQ=255)

                                                                                       aagCCGGGGAACAATCCGGCATTCAGCGACTGATGCGACGCTGGCGCGTCTTATCAGGCAGACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTaa                                                             <  2:856310/147‑1 (MQ=255)

                                                                                       aTGCCGGGTAACAATCCGGCATTCAGCGCCGGATGCGAAGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTaa                                                             <  2:336952/149‑1 (MQ=255)

                                                                                            gggTAACATTCCGGAATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCTGGCCTACGTTAATTCTGCTATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACgctg                                                        <  1:910065/149‑1 (MQ=255)

                                                                                            gggTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCGACGTTAAATCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACgctg                                                        <  2:1392168/149‑1 (MQ=255)

                                                                                              gTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACgctgct                                                      >  2:506770/1‑149 (MQ=255)

                                                                                               tAACAATCGGGAATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTc                                                     <  2:1552470/149‑1 (MQ=255)

                                                                                               tAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCTTCCGGCATTGACTGCAAACTTAACGCTGCTc                                                     >  1:1466602/1‑149 (MQ=255)

                                                                                                    cagaattaacgtaggcctgataagacgcgccagcgtcgcatcaggcCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGc                                                >  1:14375‑M2/47‑149 (MQ=255)

                                                                                                     tCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCg                                               >  1:1031396/1‑149 (MQ=255)

                                                                                                      ccGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGt                                              <  1:1116838/149‑1 (MQ=255)

                                                                                                       cGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGtt                                             >  1:952335/1‑149 (MQ=255)

                                                                                                           aTTCAGCGCCTTATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTaaa                                         <  2:183448/149‑1 (MQ=255)

                                                                                                            ttCAGCGCCTGATGCGCCGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAac                                        >  2:903559/1‑149 (MQ=255)

                                                                                                             tCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATGAGGCGGTCACGCGGCATCCGGGAGGGACCGCAAACTTTACGCTGCGCGTGGCGGTTGAacc                                       >  2:1451990/1‑148 (MQ=25)

                                                                                                               aGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACAcc                                     >  1:772803/1‑149 (MQ=255)

                                                                                                               aGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACAcc                                     >  1:724781/1‑149 (MQ=255)

                                                                                                               aGCGCCTGAAGCGAAGCTGGCGCGTATTATCAGGCCTACGTTAATTCTGCAATATATTTAATCTGCATGCTTTTCTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACAcc                                     <  2:927604/149‑1 (MQ=37)

                                                                                                                gcgcCTGATGCGACGCTGGCGCGTCTTATCAGGCCTAAGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCCTTCACGCCGCATCCGGCTTTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCa                                    >  1:358063/1‑149 (MQ=255)

                                                                                                                    CTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTTACGCTGCTCGTAGCGTTTAAACACCAGTTc                                <  2:740275‑M1/149‑1 (MQ=255)

                                                                                                                    CTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTc                                <  1:1278498‑M1/149‑1 (MQ=255)

                                                                                                                     tgataagacgcgccagcgtcgcatcaggcCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAACCACCAGTTCg                               >  2:1378024‑M2/30‑149 (MQ=255)

                                                                                                                      GATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGc                              <  2:556915‑M1/149‑1 (MQ=255)

                                                                                                                       ATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGcc                             <  2:135295‑M1/149‑1 (MQ=255)

                                                                                                                        ggCGACGCGGGCGCGTCTTATCAGGCCTACGTTAATTCGGCAATATAATGAATCAGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCa                            <  1:1026824/148‑1 (MQ=255)

                                                                                                                           gACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTg                         >  2:783981/1‑149 (MQ=255)

                                                                                                                           gACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGATTAAACACCAGTTCGCCATTg                         >  2:265434/1‑149 (MQ=255)

                                                                                                                              gCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTTAACACCAGTTGTCGATTGCTg                      >  1:680293/1‑149 (MQ=255)

                                                                                                                              gCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCCTTCACGCCGCCTCCGGCATTGACTGCAAACTAAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTg                      >  2:875667/1‑149 (MQ=255)

                                                                                                                               cTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTgg                     >  2:936651/1‑149 (MQ=255)

                                                                                                                                tGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTgga                    >  2:1561084/1‑149 (MQ=255)

                                                                                                                                tGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTgga                    <  2:12379/149‑1 (MQ=255)

                                                                                                                                  gcgcGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTggagg                  <  2:1089974/149‑1 (MQ=255)

                                                                                                                                    gcgTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGaa                <  1:1438974/149‑1 (MQ=255)

                                                                                                                                     cgTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAAt               <  1:632025/149‑1 (MQ=255)

                                                                                                                                       tCTTATCAGGCCTACGTTAATTCTGAAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGAATCCGGCATTGAATGCAAACTTAACGCTGCTCGTAGCGTTTAAACAACAGTTCGCCATTCCTGGAGGAATCt             >  2:1559061/1‑149 (MQ=37)

                                                                                                                                        cTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCtt            <  1:1294090/149‑1 (MQ=255)

                                                                                                                                         ttATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTtc           <  2:335751/149‑1 (MQ=255)

                                                                                                                                         ttATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGACGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTtc           >  2:1191753/1‑149 (MQ=255)

                                                                                                                                          tATCAGGCCTACGATAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTtca          <  2:869622/149‑1 (MQ=255)

                                                                                                                                           atcaggcCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTtcat         <  2:36561‑M2/142‑1 (MQ=255)

                                                                                                                                           atcaggcCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTtcat         <  2:78312‑M2/142‑1 (MQ=255)

                                                                                                                                           atcaggcCTACGTTAATTCTGCAATATATTGAAACTGCATGATTTTGTAGGCAGGATAAGGCGTTCACGCAGCATCCGGCATTGACTGCAAACTTAACGCTGATCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATATtcat         >  1:959490‑M2/8‑149 (MQ=255)

                                                                                                                                            tcaggcCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCTTTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTtcatc        <  1:788103‑M2/143‑1 (MQ=255)

                                                                                                                                              aggcCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACTCTGCTCGTATCGTTTAAACACGAGTTCGCCATTGCTGGAGGAATCTTGATGaa      >  2:848030‑M2/5‑149 (MQ=255)

                                                                                                                                               ggcCTAAGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGAAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTTCATCaaa     <  1:1245709‑M2/146‑1 (MQ=255)

                                                                                                                                                 cCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTTCATCAAAGa   >  2:1551568‑M2/2‑149 (MQ=255)

                                                                                                                                                  cTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTTCATCAaagaa  >  2:1337095/1‑149 (MQ=255)

                                                                                                                                                  cTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTTCATCAaagaa  >  2:451267/1‑149 (MQ=255)

                                                                                                                                                  cTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTTCATCAaagaa  >  1:1175190/1‑149 (MQ=255)

CGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCGTTTAAACACCAGTTCGCCATTGCTGGAGGAATCTTCATCAAAGAA  >  NC_000913/5451‑5745

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.