New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 53551485 (0.940)5 (0.060) 5/252 NT 5.8% coding (1599/1782 nt) gcl glyoxylate carboligase
?NC_000913 = 535539 86 (1.040)coding (1624/1782 nt) gcl glyoxylate carboligase

Only 100 of 115 total aligned reads displayed.

GCGCTTTTGACATGGACTACTGCGTGCAACTCGCTTTCGAGAATATCAACTCCAGTGAAGTGAATGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACTGGATAACGTCATGGAATTTGAAGATATCGCCGATAACGCAGCGGA  >  NC_000913/535366‑535660
                                                                                                                                                    |                                                                                                                                                  
ccgctTTTGACATGGACTACTGCGTGCAACTCGCTATCGAGAATATCACCTCCAGGGAAGTGACTGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGGTGTAAAGCTATTCGGGGCTTCAAACCGGAAGATATTGCGCCA                                                                                                                                                    <  2:72520‑M1/148‑1 (MQ=255)
    ttttGACATGGACTACTGCGTGCAACTCGCTTTCGAGAATATCAACTCCACTGAAGTGAATGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTAATAGGGTCTTCAAACCGGAAGATATTGCGCCAGCCt                                                                                                                                                >  1:433373/1‑149 (MQ=255)
      ttGACATGGACTACTGCGTGCAACTCGCTTTCGAGAATCTCAACTCCAGTGAAGGGACTGGCTACGGGGTCGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCttt                                                                                                                                              <  1:1021413/149‑1 (MQ=255)
         aCATGGACTACTGCGTGCAACTCGCTTTCGAGAATATCAACTCCAGTGAAGTGAATGGCTACGGTGTTGCCCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCTGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGaa                                                                                                                                           >  1:1410366/1‑149 (MQ=255)
         aCATGGACTACTGCGTGCAACTCGCTTTCGAGAATATCAACTCCAGTGAAGTGAATGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGaa                                                                                                                                           >  2:203361/1‑149 (MQ=255)
         aCATGGACTACTGCGTGCAACTCGCTTTCGAGAATATCAACTCCAGTGAAGTGAATGGCTACGGTGTTGACAACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGaa                                                                                                                                           <  2:687005/149‑1 (MQ=255)
           aTGGACTACTGCGTGCAACTCGCTTTCGAGAATATCAACTCCAGTGAAGTGAATGGCTACGGTGTTGACCACGGAAAAGTAGCGGAAGGTTGAGGTTGTAAAGCTATTCGGGTCTTAAAACCGGAAGATATTGCGCCAGCCTTTGAACa                                                                                                                                         >  1:1158739/1‑149 (MQ=255)
           aTGGACTACTGCGTGCAACTCGCTTTCGAGAATATCAACTCCAGGGAAGTGAATAGCTACGGTGTTGACCACGTAAAAGTAGCGGTTGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTTCGCCAGCCTTTGATCa                                                                                                                                         >  2:1499317/1‑149 (MQ=255)
            tGGACTACTGCGTGCAACTCGCTTTCGAGAATATCAACTCCAGTGAAGTGAATGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAg                                                                                                                                        <  1:1219099/149‑1 (MQ=255)
             ggACTACTGCGTGCAACTCGCTTTCGATAATATCAACTCCAGTGAAGTGAATGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAgg                                                                                                                                       <  1:1171609/149‑1 (MQ=255)
             ggACTACTGCGTGCAACTCGCTTTCGAGAATATCAACTCCAGTGAAGTGAATGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAgg                                                                                                                                       >  1:582399/1‑149 (MQ=255)
              gACTACTGCGTGCAACTCGCTTTCGAGAATATCAACTCCAGTGAAGTGAATGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGc                                                                                                                                      >  2:1364749/1‑149 (MQ=255)
                  actGCGTGCAACTCGCTTTCGAGAATATCAACTCCAGTGAAGTGAATGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGaaa                                                                                                                                  <  1:20907/149‑1 (MQ=255)
                      cGTGCAACTCGCTTTCGAGAATATCAACTCCAGTGAAGTGAATGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCt                                                                                                                              >  1:502423/1‑149 (MQ=255)
                        tGCAACTCGCTTTCGAGAATATCAACTCCAGTGAAGTGAATGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTa                                                                                                                            >  1:49803/1‑149 (MQ=255)
                         gCAACTCGCTTTCGATAATATCAACTCCAGTGAAGTGAATGGCTACGGGGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGGTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTaa                                                                                                                           <  2:367543/149‑1 (MQ=255)
                           aagtCGCTTTAGAGAATATCAACTCGAGTGAAGTGTATGGCTACCGTGTTGACCAGGTAAAAGTAGCTGAAGGTTTAGGTTGTAAAGCTATTCGGGTATTAAAACCGGAAGATATTGCGCCATCCTTTGAACAGGCGAAAGCCTTAATg                                                                                                                         <  2:569929/146‑1 (MQ=255)
                           aaCTCGCTTTCGAGAATATCAACTCCAGTGAAGTGAATGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAAtg                                                                                                                         <  1:570699‑M2/149‑3 (MQ=255)
                            aCTCGCTTTCGAGAATATCAACTCCAGTGAAGTGAATGGCTACGGTGTTGACCAAGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATAGCGCCAGCCTTTGAACAGGCGAAAGCCTTAAtgg                                                                                                                        <  2:158613‑M2/149‑4 (MQ=255)
                              tCGCTTTCGAGAATATCAACTCCAGTGAAGTGAATGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGGCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAAtggcg                                                                                                                      >  1:145912‑M2/1‑144 (MQ=255)
                                gCTTTCGAGAATATCAACTCCAGTGAAGTGAATGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAAtggcgca                                                                                                                    <  2:737471‑M2/149‑8 (MQ=255)
                                  tttCGAGAATATCATCTCCAGTGAAGTGAATGGCTACGTTGTTGACCACTTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAAtggcgcaat                                                                                                                  >  2:627498‑M2/1‑140 (MQ=255)
                                   ttCGAGAATATCAACTCCAGTGAAGTGAATGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTAGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCTAAAGCCTTAAtggcgcaata                                                                                                                 <  2:65766‑M2/149‑11 (MQ=255)
                                   ttCGAGAATATCAACTCCAGTGAAGTGAATGGCTACGGGGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAttaaggctttcgcctgttcaaaggctggcgcaata                                                                                                                 <  2:589823‑M1/149‑36 (MQ=255)
                                    tCGAGAATATCAACTCCAGTGAAGTGAATGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAttaaggctttcgcctgttcaaaggctggcgcaatat                                                                                                                <  1:1468897‑M1/149‑37 (MQ=255)
                                       agaATATCAACTCCAGTGAAGTGAATGGCTACGGTGTTGCCCACGTAAAAGTAGCGGAAGGATTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCgg                                                                                                             <  1:797339/149‑1 (MQ=255)
                                       agaATATCAACTCCAGTGAAGTGAATGGCTACGGTGTTGACCACGTAAAAGTATCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGTAAGATATTGCGACAGCCTTTGAACAGGCGAAAGCCTTAAAGGCGCAATATCgg                                                                                                             >  2:1309564/1‑149 (MQ=255)
                                        gaATATCAACTCCAGTGAAGTGAATGGCTACGGTGTTGACCACGTAAAAGGAGCGGAAGGTTTAGTTTGTAAAGCTATTCGTGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCggg                                                                                                            >  1:842765/1‑149 (MQ=255)
                                          atatCAACTCCAGTGAAGGGAATGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAttaaggctttcgcctgttcaaaggctggcgcaatatcttccg                                                                                                          <  2:1525723‑M1/149‑43 (MQ=255)
                                             tCAACTCCAGTGAAGTGAATGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGCTTAGGTTGTACAGCTATTCGGGGCTTCAAACCGGAAGATATTGCGCCAttaaggctttcgcctgttcaaaggctggcgcaatatcttccggtt                                                                                                       <  1:795934‑M1/149‑46 (MQ=255)
                                              cAACTCCAGTGAAGTGAATGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAttaaggctttcgcctgttcaaaggctggcgcaatatcttccggttt                                                                                                      <  2:965735‑M1/149‑47 (MQ=255)
                                              cAACTCCAGTGAAGTGAATGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCgg                                                                                                      >  1:372496/1‑149 (MQ=255)
                                                aCTCCAGTGAAGTGAATGGCTACGGTGTTGACCCCGTAAAAGTAGCGGAAGGTTTAGGTTGTAAGGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAACGCCTTAATGGCGCAATATCGGGTACAGGTa                                                                                                    >  2:43618/1‑149 (MQ=255)
                                                    cAGTGAAGTGAATGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCg                                                                                                <  1:1253092/149‑1 (MQ=255)
                                                    cAGTGAAGTGAATGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCg                                                                                                >  2:1277432/1‑149 (MQ=255)
                                                     agtgaagtgaATGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGt                                                                                               <  2:772590/149‑1 (MQ=255)
                                                        gaagtgaaTGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGa                                                                                            <  2:1442773/149‑1 (MQ=255)
                                                         aagtgaaTGGCTACGGTGTTGCCCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGaa                                                                                           >  1:289669/1‑149 (MQ=255)
                                                         aagtgaaTGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGaa                                                                                           >  1:1118799/1‑149 (MQ=255)
                                                           gtgaaTGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGAGCAATATCGGGTACCGGTAGTCTTGGAAGt                                                                                         >  1:1144906/1‑149 (MQ=255)
                                                                tGGCTACGGTGTTGACCACGTAAAAGAAGCGGAAGGTTTAGGTTGTAACGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCGTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATtc                                                                                    <  1:1482330/149‑1 (MQ=255)
                                                                 ggCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATtct                                                                                   >  2:577387/1‑149 (MQ=255)
                                                                  gCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTCTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATtctc                                                                                  <  1:11156/149‑1 (MQ=255)
                                                                  gCTAAGGTGTTGACCACGTAAAAGTAGCGGATTGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATtctc                                                                                  <  2:400894/149‑1 (MQ=255)
                                                                    tACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGAAATATCGGGTACCGGTAGTCTTGGAAGTTATTCTCGa                                                                                >  1:1051572/1‑149 (MQ=255)
                                                                    tACGGTGTTGACAACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTAAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGa                                                                                >  2:23661/1‑149 (MQ=255)
                                                                        ttgtTGACCACCTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCgt                                                                            <  1:891610/148‑1 (MQ=255)
                                                                        gtgtTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCgt                                                                            <  1:227463/149‑1 (MQ=255)
                                                                        gtgcTGACCACGTAAAAGAAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGGCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCgt                                                                            <  2:1157496/149‑1 (MQ=255)
                                                                          gtTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCgtgt                                                                          <  1:737471/149‑1 (MQ=255)
                                                                             gACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGAc                                                                       >  2:66239/1‑149 (MQ=255)
                                                                              aCCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTTTGAcc                                                                      >  2:924470/1‑149 (MQ=255)
                                                                                   gTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAatat                                                                 >  1:956819/1‑149 (MQ=255)
                                                                                   gTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAatat                                                                 >  1:97175/1‑149 (MQ=255)
                                                                                     aaaaGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATAttt                                                               >  2:450155/1‑149 (MQ=255)
                                                                                     aaaaGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGAGTGACCAATAttt                                                               >  2:1555773/1‑149 (MQ=255)
                                                                                               gAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAg                                                     >  1:489213/1‑149 (MQ=255)
                                                                                               gAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAg                                                     >  1:541116/1‑149 (MQ=255)
                                                                                               gAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCGTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGGGACCAATATTTCGATGGGCAg                                                     >  1:417244/1‑149 (MQ=255)
                                                                                                 aGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCg                                                   <  1:1261467/149‑1 (MQ=255)
                                                                                                 aGGTTTAGGTTGTAAAGCTATTCGGGGCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGTGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCg                                                   <  2:366875/149‑1 (MQ=255)
                                                                                                   gTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGaa                                                 >  1:1189011/1‑149 (MQ=255)
                                                                                                      tAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACTg                                              >  2:509859/1‑149 (MQ=255)
                                                                                                      tAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACTg                                              >  1:585888/1‑149 (MQ=255)
                                                                                                        ggTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACATGAGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACTGGa                                            <  1:332938/149‑1 (MQ=255)
                                                                                                         gTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCTATATTTCGATGGGCAGCGAACTGGAt                                           >  2:1460080/1‑149 (MQ=255)
                                                                                                           tGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATTGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTGGAGCGTGTGACCAATATTTAGATGGTCAGAGATCttgttta                                         >  1:1446616/1‑143 (MQ=255)
                                                                                                              aaaGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTTCCGGTAGTCGTGGAAGTTATTGTCGAGCGTGTGACAAATATTTCGATGGGCAGATAACTGGATAAcct                                      >  2:1095761/1‑147 (MQ=255)
                                                                                                               aaGCTATTCGGGGCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAACGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACTGGATAACGTc                                     <  2:1174288/149‑1 (MQ=255)
                                                                                                                 gCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACTGGATAACGTCAt                                   >  1:207759/1‑149 (MQ=255)
                                                                                                                        gggTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACTGGATAACGTCATGGAAttt                            >  2:1502396/1‑149 (MQ=255)
                                                                                                                        gggTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGACGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACTGGATAACGTCATGGAAttt                            >  2:526159/1‑149 (MQ=255)
                                                                                                                          gTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACTGGATAACGTCATGGAATTTGa                          <  2:489213/149‑1 (MQ=255)
                                                                                                                           gcTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACTGGATAACGTCATGGAATTTGaa                         <  1:95034/148‑1 (MQ=255)
                                                                                                                                aaaCCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACTGGATAACGTCATGGAATTTGAAGatat                    <  2:570699/149‑1 (MQ=255)
                                                                                                                                aaaCCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCATGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACTGGATAACGTCATGGAATTTGAAGatat                    <  2:314391/149‑1 (MQ=255)
                                                                                                                                 aaCCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAAtggcgcaatatcttccggtttgaagccccgaatagctgtacaacctaagccttccgctacttttacgtggtcaacaccgtagccattcacttcactggagttga                   <  1:795934‑M2/149‑105 (MQ=255)
                                                                                                                                   ccGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGTGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACTGGATAACGTCATGGAATTTGAAGATATCGc                 <  2:1409504/149‑1 (MQ=255)
                                                                                                                                   ccGGAAGATATTGCGCCAGCCTTTCAACAGGCGAACGCCTTAATGTCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCTTGTGACCAATATTTCGATGGGCAGCGAACTGGATAACGTCATGGAATTTGAAGATATCGc                 <  2:1024753/149‑1 (MQ=255)
                                                                                                                                    cGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAAtggcgcaatatcttccggtttgaagacccgaatagctttacaacctaaaccttccgctacttttacgtggtcaacaccgtagccattcccttcactggagttgatat                <  2:1525723‑M2/149‑108 (MQ=255)
                                                                                                                                    cGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACTGGATAACGTCATGGAATTTGAAGATATCGcc                >  1:607602/1‑149 (MQ=255)
                                                                                                                                      gAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACt                                               <  1:61367/116‑1 (MQ=255)
                                                                                                                                      gAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACTGGATAACGTCATGGAATTTGAAGATATCGCCGa              >  1:1550850/1‑149 (MQ=255)
                                                                                                                                      gAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACTGGATAACGTCATGGAATTTGAAGATATCGCCGa              >  2:64601/1‑149 (MQ=255)
                                                                                                                                      gAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACTGGATAACGTCATGGAATTTGAAGATATCGCCGa              >  1:499046/1‑149 (MQ=255)
                                                                                                                                         gATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACTGGATAACGTCATGGAATTTGAAGATATCGCCGATaa           <  2:559266/149‑1 (MQ=255)
                                                                                                                                          atatTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAAtggcgcaatatcttccggtttgaagacccgaatagctttacaacctaaaccttccgctacttttacgtggtcaacaccgtagccattcacttcactggagttgatattctcga          <  1:1468897‑M2/149‑114 (MQ=255)
                                                                                                                                           tatTGCGCCAttaaggctttagcctgttcaaaggctggcgcaatatcttccggtttgaagaccctaatagctttacaacctaaaccttccgctacttttacgtggtcaacaccgtagccattcacttcactggagttgatattctcgaa         <  2:65766‑M1/149‑140 (MQ=255)
                                                                                                                                           tatTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAAtggcgcaatatcttccggtttgaagacccgaatagctttacaacctaaaccttccgctacttttacgtggtcaaccccgtagccattcacttcactggagttgatattctcgaa         <  2:589823‑M2/149‑115 (MQ=255)
                                                                                                                                           tatTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACTGGATAACGTCATGGAATTTGAAGATATCGCCGATAACg         >  2:595244/1‑149 (MQ=255)
                                                                                                                                            atTGCGCCAttaaggctttcgcctgttcaaaggctggcgcaatatcttccggtttgaagacccgaatagctttacaacctaaaccttccgctacttttaagtggtcaacaacgtagccattcacttcactggagatgatattctcgaaa        >  2:627498‑M1/1‑9 (MQ=255)
                                                                                                                                             ttGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACTGGATAACGTCATGGAATTTGAAGATATCGCCGATAACGCa       <  1:1364749/149‑1 (MQ=255)
                                                                                                                                             ttGCGACACACTTTGAACAGGCGAAAGCCTTAATGGCGCAATAGCGGGAACCGGTAGTCGTGGAAGTTAATCACGCGCTGGTGACCAATATTTCGATAGGGAGCGAACTGAAAAACGTCTAGGAATTCGAAGATATCGCCGATAACGCa       >  2:276079/1‑149 (MQ=255)
                                                                                                                                              tGCGCCAttaaggctttcgcctgttcaaaggctggcgcaatatcttccggtttgaagacccgaatagctttacaacctaaaccttccgctacttttacgtggtcaacaccgtagccattcacttcactggagttgatattctcgaaagc      <  2:737471‑M1/149‑143 (MQ=255)
                                                                                                                                                cgcCAttaaggctttcgcctgttcaaaggctggcgcaatatcttccggtttgaagccccgaatagctttacaacctaaaccttccgctacttttacgtggtcaacaccgtagccattcacttcactggagttgatattctcgaaagcga    >  1:145912‑M1/1‑5 (MQ=255)
                                                                                                                                                cgcCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACTGGATAACGTCATGGAATTTGAAGATATCGCCGATAACGCAGCg    >  1:1370174/1‑149 (MQ=255)
                                                                                                                                                cgcCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACAAATATTTCGATGGGCAGCGAACTGGATAACGTCATGGAATTTGAAGATATCGCCGATAACGCAGCg    <  2:433373/149‑1 (MQ=255)
                                                                                                                                                  ccAttaaggctttcgcctgttcaaaggctggcgctatatcttccggtttgaagacccgaatagctttacaacctaaaccttccgctacttttacttggtcaacaccgtagccattcacttcactggagttgatattctcgaaagcgagt  <  2:158613‑M1/149‑147 (MQ=255)
                                                                                                                                                  ccAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGCGCGTGTGACCAATATTTCGATGGGCAGCGAACTGGATAACGTCATGGAATTTGAAGATCTCGCCGATAACGCAGCggc  >  1:778064/1‑148 (MQ=255)
                                                                                                                                                  ccAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACTGGATAACGTCATGGAATTTGAAGATATCGCCGATAACGCAGCgtc  >  1:784525/1‑147 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
GCGCTTTTGACATGGACTACTGCGTGCAACTCGCTTTCGAGAATATCAACTCCAGTGAAGTGAATGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACTGGATAACGTCATGGAATTTGAAGATATCGCCGATAACGCAGCGGA  >  NC_000913/535366‑535660

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.